RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C ODC1Q03028 310 aa3.54□□□□□ -1.84
RXT3YDL076C SPG4Q04438 115 aa3.54□□□□□ -1.84
RXT3YDL076C NEJ1Q06148 342 aa3.54□□□□□ -1.84
RXT3YDL076C GEP3Q08622 556 aa3.54□□□□□ -1.84
RXT3YDL076C YPL225WQ08971 146 aaKnown RBP3.54□□□□□ -1.84
RXT3YDL076C RPL21BQ12672 160 aaKnown RBP3.54□□□□□ -1.84
RXT3YDL076C LSB5P25369 354 aa3.53□□□□□ -1.84
RXT3YDL076C MIG1P27705 504 aa3.53□□□□□ -1.84
RXT3YDL076C DOA4P32571 926 aa3.53□□□□□ -1.84
RXT3YDL076C PAU24P38155 120 aa3.53□□□□□ -1.84
RXT3YDL076C QDR3P38227 689 aa3.53□□□□□ -1.84
RXT3YDL076C SDS24P38314 527 aa3.53□□□□□ -1.84
RXT3YDL076C BMT5P40493 336 aa3.53□□□□□ -1.84
RXT3YDL076C APJ1P53940 528 aa3.53□□□□□ -1.84
RXT3YDL076C CTF19Q02732 369 aa3.53□□□□□ -1.84
RXT3YDL076C BET5Q03630 159 aa3.53□□□□□ -1.84
RXT3YDL076C NOC4Q06512 552 aaPredicted RBP3.53□□□□□ -1.84
RXT3YDL076C MDM36Q06820 579 aa3.53□□□□□ -1.84
RXT3YDL076C ORT1Q12375 292 aa3.53□□□□□ -1.84
RXT3YDL076C REP2P03872 296 aa3.52□□□□□ -1.85
RXT3YDL076C SIR2P06700 562 aa3.52□□□□□ -1.85
RXT3YDL076C ATG22P25568 528 aa3.52□□□□□ -1.85
RXT3YDL076C VMA6P32366 345 aaKnown RBP3.52□□□□□ -1.85
RXT3YDL076C CPR5P35176 225 aa3.52□□□□□ -1.85
RXT3YDL076C AST1P35183 429 aa3.52□□□□□ -1.85
RXT3YDL076C SFK1P35735 353 aa3.52□□□□□ -1.85
RXT3YDL076C SHE2P36068 246 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
RXT3YDL076C UMP1P38293 148 aa3.52□□□□□ -1.85
RXT3YDL076C NVJ1P38881 321 aa3.52□□□□□ -1.85
RXT3YDL076C SMB1P40018 196 aaKnown RBP3.52□□□□□ -1.85
RXT3YDL076C AVT6P40074 448 aa3.52□□□□□ -1.85
RXT3YDL076C CCS1P40202 249 aaKnown RBP3.52□□□□□ -1.85
RXT3YDL076C MSS2P40990 351 aa3.52□□□□□ -1.85
RXT3YDL076C RPA34P47006 233 aaPredicted RBP3.52□□□□□ -1.85
RXT3YDL076C CAB4P53332 305 aa3.52□□□□□ -1.85
RXT3YDL076C GIM3P53900 129 aa3.52□□□□□ -1.85
RXT3YDL076C HSK3P69852 69 aa3.52□□□□□ -1.85
RXT3YDL076C HNT1Q04344 158 aaKnown RBP3.52□□□□□ -1.85
RXT3YDL076C TIM18Q08749 192 aa3.52□□□□□ -1.85
RXT3YDL076C YPL199CQ08954 240 aa3.52□□□□□ -1.85
RXT3YDL076C QCR7P00128 127 aa3.51□□□□□ -1.85
RXT3YDL076C PET54P10834 293 aa3.51□□□□□ -1.85
RXT3YDL076C TAL1P15019 335 aaKnown RBP3.51□□□□□ -1.85
RXT3YDL076C GRX2P17695 143 aaKnown RBP3.51□□□□□ -1.85
RXT3YDL076C RNA14P25298 677 aaKnown RBP3.51□□□□□ -1.85
RXT3YDL076C TIP1P27654 210 aaPredicted RBP3.51□□□□□ -1.85
RXT3YDL076C ERG2P32352 222 aa3.51□□□□□ -1.85
RXT3YDL076C PAU2P32612 120 aa3.51□□□□□ -1.85
RXT3YDL076C YKL063CP35725 167 aa3.51□□□□□ -1.85
RXT3YDL076C PMU1P36069 295 aa3.51□□□□□ -1.85
RXT3YDL076C PRS4P38063 326 aaPredicted RBP3.51□□□□□ -1.85
RXT3YDL076C YBR285WP38354 144 aa3.51□□□□□ -1.85
RXT3YDL076C EGD2P38879 174 aaKnown RBP3.51□□□□□ -1.85
RXT3YDL076C YJL213WP40896 331 aa3.51□□□□□ -1.85
RXT3YDL076C STD1Q02794 444 aa3.51□□□□□ -1.85
RXT3YDL076C YMR166CQ03829 368 aa3.51□□□□□ -1.85
RXT3YDL076C TSA2Q04120 196 aa3.51□□□□□ -1.85
RXT3YDL076C YPD1Q07688 167 aa3.51□□□□□ -1.85
RXT3YDL076C DGK1Q12382 290 aa3.51□□□□□ -1.85
RXT3YDL076C TRM10Q12400 293 aa3.51□□□□□ -1.85
RXT3YDL076C HUT1Q12520 339 aa3.51□□□□□ -1.85
RXT3YDL076C MED11Q99278 115 aa3.51□□□□□ -1.85
RXT3YDL076C YCR022CP25620 114 aa3.5□□□□□ -1.85
RXT3YDL076C YHK8P38776 514 aa3.5□□□□□ -1.85
RXT3YDL076C DDI1P40087 428 aa3.5□□□□□ -1.85
RXT3YDL076C AGE2P40529 298 aa3.5□□□□□ -1.85
RXT3YDL076C RBL2P48606 106 aaKnown RBP3.5□□□□□ -1.85
RXT3YDL076C GPN3Q06543 272 aa3.5□□□□□ -1.85
RXT3YDL076C PRM3Q08931 133 aa3.5□□□□□ -1.85
RXT3YDL076C YOR029WQ12243 111 aa3.5□□□□□ -1.85
RXT3YDL076C JID1Q12350 301 aa3.5□□□□□ -1.85
RXT3YDL076C PRE7P23724 241 aaKnown RBP3.49□□□□□ -1.85
RXT3YDL076C ATP3P38077 311 aaKnown RBP3.49□□□□□ -1.85
RXT3YDL076C CUE1P38428 203 aa3.49□□□□□ -1.85
RXT3YDL076C SYS1P41544 203 aa3.49□□□□□ -1.85
RXT3YDL076C CAF40P53829 373 aa3.49□□□□□ -1.85
RXT3YDL076C TDA1Q03533 586 aa3.49□□□□□ -1.85
RXT3YDL076C LPP1Q04396 274 aa3.49□□□□□ -1.85
RXT3YDL076C FIT1Q04433 528 aa3.49□□□□□ -1.85
RXT3YDL076C HOR7Q05827 59 aa3.49□□□□□ -1.85
RXT3YDL076C YNG1Q08465 219 aa3.49□□□□□ -1.85
RXT3YDL076C YGK3Q12222 375 aaPredicted RBP3.49□□□□□ -1.85
RXT3YDL076C MPD1Q12404 318 aaKnown RBP3.49□□□□□ -1.85
RXT3YDL076C YPL119C-AQ3E751 87 aa3.49□□□□□ -1.85
RXT3YDL076C YLR099W-AQ3E798 87 aa3.49□□□□□ -1.85
RXT3YDL076C TDH1P00360 332 aaKnown RBP3.48□□□□□ -1.85
RXT3YDL076C MRS3P10566 314 aa3.48□□□□□ -1.85
RXT3YDL076C DPB2P24482 689 aaPredicted RBP3.48□□□□□ -1.85
RXT3YDL076C PEX4P29340 183 aa3.48□□□□□ -1.85
RXT3YDL076C HYM1P32464 399 aa3.48□□□□□ -1.85
RXT3YDL076C ZRT3P34240 503 aa3.48□□□□□ -1.85
RXT3YDL076C MST28P39552 234 aa3.48□□□□□ -1.85
RXT3YDL076C FCY21P40039 528 aa3.48□□□□□ -1.85
RXT3YDL076C PDS1P40316 373 aaPredicted RBP3.48□□□□□ -1.85
RXT3YDL076C RFC2P40348 353 aa3.48□□□□□ -1.85
RXT3YDL076C RPA43P46669 326 aa3.48□□□□□ -1.85
RXT3YDL076C RPL9BP51401 191 aaKnown RBP3.48□□□□□ -1.85
RXT3YDL076C SLX9P53251 210 aaPredicted RBP3.48□□□□□ -1.85
RXT3YDL076C RSM27P53305 110 aa3.48□□□□□ -1.85
RXT3YDL076C GRX5Q02784 150 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms