RNA–Protein interactions for RNA: YCL014W

BUD3, Transcript of Protein involved in bud-site selection, yeast

Gene BUD3, Length 4,911 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD3	YCL014W	MRM2	P53123	320 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	CWC25	P53854	179 aa	Known RBP	0.84	□□□□□ -2.28
BUD3	YCL014W	RPL6A	Q02326	176 aa	Known RBP	0.84	□□□□□ -2.28
BUD3	YCL014W	HSP31	Q04432	237 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	YML096W	Q04489	525 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	YMR252C	Q04814	134 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	ATG39	Q06159	398 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	MRL1	Q06815	381 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	YPD1	Q07688	167 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	DGA1	Q08650	418 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	YOR008C-A	Q3E7B9	74 aa		0.84	□□□□□ -2.28
BUD3	YCL014W	YEL009C-A	A0A023PZF2	135 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	MBF1	O14467	151 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YGL010W	P25338	174 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	COS9	P36034	407 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	MPC2	P38857	129 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	YER079W	P40052	210 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	NIF3	P53081	288 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	MST27	P53176	234 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	SMT3	Q12306	101 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	ATP14	Q12349	124 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	AIM45	Q12480	344 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	ADF1	Q2V2Q1	113 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	TIR1	P10863	254 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	OSM1	P21375	501 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YCR100C	P25606	316 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	YCR051W	P25631	222 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	BMH2	P34730	273 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	CLG1	P35190	452 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	UTH1	P36135	365 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	PRP39	P39682	629 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	HMS2	P47175	358 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	TRM9	P49957	279 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	PRP24	P49960	444 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YGL149W	P53116	101 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	NSA1	P53136	463 aa	Predicted RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	SAY1	P53324	424 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	YNL140C	P53910	189 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	SPC19	Q03954	165 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	YMR253C	Q04835	414 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	BER1	Q06688	274 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YDR056C	Q12025	205 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	APC9	Q12107	265 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	Q0144	Q9ZZW2	109 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	OPI3	P05375	206 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	MSI1	P13712	422 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	YMR31	P19955	123 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	RPL24B	P24000	155 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YBR090C	P38253	122 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	SRB7	P47822	140 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	AVT4	P50944	713 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	RCF2	P53721	224 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	LGE1	Q02796	332 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	UPS1	Q05776	175 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	ASR1	Q06834	288 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	YOL075C	Q08234	1294 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	RAX1	Q08760	435 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	LSO2	Q3E772	92 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	RTC6	O14464	93 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	LEU4	P06208	619 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	RPL16A	P26784	199 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	URA7	P28274	579 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	ASC1	P38011	319 aa	Known RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YHR033W	P38690	423 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	IPI1	P38803	334 aa	Predicted RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YJR011C	P47086	261 aa	Predicted RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	LCL3	P53153	274 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	HOP2	P53187	214 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	MRPL50	P53724	139 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	UIP4	Q08926	304 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	POC4	Q12245	148 aa	Predicted RBP	0.83	□□□□□ -2.28
BUD3	YCL014W	YKL018C-A	Q3E7A7	99 aa		0.83	□□□□□ -2.28
BUD3	YCL014W	EPT1	P22140	391 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	YPS1	P32329	569 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	RRN3	P36070	627 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	YHR035W	P38769	630 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	NSG1	P38837	291 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	SOP4	P39543	234 aa	Predicted RBP	0.82	□□□□□ -2.28
BUD3	YCL014W	YAR029W	P39549	74 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	PEP8	P40335	379 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	YCH1	P42937	148 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	PIR1	Q03178	341 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	TVP15	Q03860	143 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	SNA4	Q07549	140 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	YDR029W	Q12111	104 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	SSA3	P09435	649 aa	Known RBP	0.82	□□□□□ -2.28
BUD3	YCL014W	SPT14	P32363	452 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	AIM29	P36154	155 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	ECM8	P38246	354 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	TAE1	P38340	232 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	SER3	P40054	469 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	PGD1	P40356	397 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	BAT2	P47176	376 aa	Known RBP	0.82	□□□□□ -2.28
BUD3	YCL014W	PKR1	Q03880	122 aa	Known RBP	0.82	□□□□□ -2.28
BUD3	YCL014W	ATC1	Q04005	294 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	YPR098C	Q06089	161 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	LUC7	Q07508	261 aa	Predicted RBP	0.82	□□□□□ -2.28
BUD3	YCL014W	YOR292C	Q08743	309 aa		0.82	□□□□□ -2.28
BUD3	YCL014W	SAM4	Q08985	325 aa	Known RBP	0.82	□□□□□ -2.28
BUD3	YCL014W	YPL245W	Q12179	454 aa	Known RBP	0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms