RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C YML018CQ03730 393 aa5.4□□□□□ -1.54
LDB7YBL006C HUG1Q6Q5K6 68 aa5.4□□□□□ -1.54
LDB7YBL006C DIT1P21623 536 aa5.39□□□□□ -1.55
LDB7YBL006C TRR1P29509 319 aaKnown RBP5.39□□□□□ -1.55
LDB7YBL006C RNP1P32385 249 aa5.39□□□□□ -1.55
LDB7YBL006C SRY1P36007 326 aa5.39□□□□□ -1.55
LDB7YBL006C YHR122WP38829 231 aa5.39□□□□□ -1.55
LDB7YBL006C IES5P40060 125 aa5.39□□□□□ -1.55
LDB7YBL006C RPA34P47006 233 aaPredicted RBP5.39□□□□□ -1.55
LDB7YBL006C UBP8P50102 471 aa5.39□□□□□ -1.55
LDB7YBL006C TOS8P53147 276 aa5.39□□□□□ -1.55
LDB7YBL006C DUO1P53168 247 aaKnown RBP5.39□□□□□ -1.55
LDB7YBL006C NRG1Q03125 231 aa5.39□□□□□ -1.55
LDB7YBL006C CAB5Q03941 241 aa5.39□□□□□ -1.55
LDB7YBL006C YHP1Q04116 353 aa5.39□□□□□ -1.55
LDB7YBL006C TY1A-MR1Q04215 440 aa5.39□□□□□ -1.55
LDB7YBL006C SYM1Q06563 197 aa5.39□□□□□ -1.55
LDB7YBL006C YFH1Q07540 174 aa5.39□□□□□ -1.55
LDB7YBL006C NKP1Q12493 238 aa5.39□□□□□ -1.55
LDB7YBL006C PET20Q99373 253 aa5.39□□□□□ -1.55
LDB7YBL006C HTB1P02293 131 aaKnown RBP5.38□□□□□ -1.55
LDB7YBL006C RPS8AP0CX39 200 aaKnown RBP5.38□□□□□ -1.55
LDB7YBL006C RPS8BP0CX40 200 aaKnown RBP5.38□□□□□ -1.55
LDB7YBL006C MIR1P23641 311 aaKnown RBP5.38□□□□□ -1.55
LDB7YBL006C UTR5P32630 166 aa5.38□□□□□ -1.55
LDB7YBL006C SEC66P33754 206 aa5.38□□□□□ -1.55
LDB7YBL006C RSM27P53305 110 aa5.38□□□□□ -1.55
LDB7YBL006C PBP4Q07362 185 aaKnown RBP5.38□□□□□ -1.55
LDB7YBL006C NDE2Q07500 545 aa5.38□□□□□ -1.55
LDB7YBL006C PRM3Q08931 133 aa5.38□□□□□ -1.55
LDB7YBL006C MRS4P23500 304 aa5.37□□□□□ -1.55
LDB7YBL006C FLO5P38894 1075 aa5.37□□□□□ -1.55
LDB7YBL006C SYG1P40528 902 aa5.37□□□□□ -1.55
LDB7YBL006C IMD3P50095 523 aaKnown RBP5.37□□□□□ -1.55
LDB7YBL006C CRH1P53301 507 aa5.37□□□□□ -1.55
LDB7YBL006C TY1A-DR2Q03964 440 aaKnown RBP5.37□□□□□ -1.55
LDB7YBL006C VBA1Q04301 562 aa5.37□□□□□ -1.55
LDB7YBL006C HRD1Q08109 551 aa5.37□□□□□ -1.55
LDB7YBL006C YOR385WQ08909 290 aa5.37□□□□□ -1.55
LDB7YBL006C VPS63O13549 108 aa5.36□□□□□ -1.55
LDB7YBL006C ATP3P38077 311 aaKnown RBP5.36□□□□□ -1.55
LDB7YBL006C HPA3P39979 161 aa5.36□□□□□ -1.55
LDB7YBL006C COX15P40086 486 aa5.36□□□□□ -1.55
LDB7YBL006C ERG25P53045 309 aa5.36□□□□□ -1.55
LDB7YBL006C CAB4P53332 305 aa5.36□□□□□ -1.55
LDB7YBL006C MCM21Q06675 368 aa5.36□□□□□ -1.55
LDB7YBL006C IES3Q12345 250 aa5.36□□□□□ -1.55
LDB7YBL006C TDH1P00360 332 aaKnown RBP5.35□□□□□ -1.55
LDB7YBL006C MDM10P18409 493 aa5.35□□□□□ -1.55
LDB7YBL006C PUP1P25043 261 aa5.35□□□□□ -1.55
LDB7YBL006C CPR4P25334 318 aa5.35□□□□□ -1.55
LDB7YBL006C AUA1P32450 94 aa5.35□□□□□ -1.55
LDB7YBL006C VMA8P32610 256 aaKnown RBP5.35□□□□□ -1.55
LDB7YBL006C GEP4P38812 185 aa5.35□□□□□ -1.55
LDB7YBL006C YHR138CP38841 114 aaPredicted RBP5.35□□□□□ -1.55
LDB7YBL006C RFC2P40348 353 aa5.35□□□□□ -1.55
LDB7YBL006C IRC18P47056 224 aa5.35□□□□□ -1.55
LDB7YBL006C MSE1P48525 536 aa5.35□□□□□ -1.55
LDB7YBL006C FMP42Q04991 504 aa5.35□□□□□ -1.55
LDB7YBL006C RGC1Q06108 1083 aaKnown RBP5.35□□□□□ -1.55
LDB7YBL006C SCP1Q08873 200 aa5.35□□□□□ -1.55
LDB7YBL006C RKI1Q12189 258 aa5.35□□□□□ -1.55
LDB7YBL006C DCP1Q12517 231 aaPredicted RBP5.35□□□□□ -1.55
LDB7YBL006C YPS1P32329 569 aa5.34□□□□□ -1.55
LDB7YBL006C MRPL38P35996 138 aaPredicted RBP5.34□□□□□ -1.55
LDB7YBL006C POP8P38208 133 aa5.34□□□□□ -1.55
LDB7YBL006C AIM20P40451 204 aa5.34□□□□□ -1.55
LDB7YBL006C LSM1P47017 172 aaKnown RBP5.34□□□□□ -1.55
LDB7YBL006C YGR219WP53307 113 aa5.34□□□□□ -1.55
LDB7YBL006C GIM3P53900 129 aa5.34□□□□□ -1.55
LDB7YBL006C MEH1Q02205 184 aa5.34□□□□□ -1.55
LDB7YBL006C THI74Q04083 370 aa5.34□□□□□ -1.55
LDB7YBL006C NGL1Q08213 363 aaKnown RBP5.34□□□□□ -1.55
LDB7YBL006C IRC23Q08416 157 aa5.34□□□□□ -1.55
LDB7YBL006C YJR112W-AQ3E743 109 aa5.34□□□□□ -1.55
LDB7YBL006C HBN1Q96VH4 193 aa5.34□□□□□ -1.55
LDB7YBL006C NOP1P15646 327 aaKnown RBP5.33□□□□□ -1.56
LDB7YBL006C ERV1P27882 189 aa5.33□□□□□ -1.56
LDB7YBL006C HYM1P32464 399 aa5.33□□□□□ -1.56
LDB7YBL006C YRA2P36036 203 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
LDB7YBL006C YNL194CP40169 301 aa5.33□□□□□ -1.56
LDB7YBL006C LST8P41318 303 aa5.33□□□□□ -1.56
LDB7YBL006C SER2P42941 309 aa5.33□□□□□ -1.56
LDB7YBL006C ACT1P60010 375 aaKnown RBP5.33□□□□□ -1.56
LDB7YBL006C YMR181CQ03231 154 aa5.33□□□□□ -1.56
LDB7YBL006C YLR281CQ05863 155 aa5.33□□□□□ -1.56
LDB7YBL006C YOL029CQ08187 201 aa5.33□□□□□ -1.56
LDB7YBL006C SOD1P00445 154 aaKnown RBP5.32□□□□□ -1.56
LDB7YBL006C PAN3P36102 679 aaPredicted RBP5.32□□□□□ -1.56
LDB7YBL006C SDH4P37298 181 aa5.32□□□□□ -1.56
LDB7YBL006C IPI1P38803 334 aaPredicted RBP5.32□□□□□ -1.56
LDB7YBL006C MIT1P40002 666 aa5.32□□□□□ -1.56
LDB7YBL006C DFG10P40526 253 aa5.32□□□□□ -1.56
LDB7YBL006C YJR012CP47087 207 aa5.32□□□□□ -1.56
LDB7YBL006C ARP3P47117 449 aaKnown RBP5.32□□□□□ -1.56
LDB7YBL006C AIM25P47140 327 aa5.32□□□□□ -1.56
LDB7YBL006C CWC23P52868 283 aaPredicted RBP5.32□□□□□ -1.56
LDB7YBL006C GRH1Q04410 372 aaKnown RBP5.32□□□□□ -1.56
LDB7YBL006C RTT103Q05543 409 aa5.32□□□□□ -1.56
LDB7YBL006C YBR255C-AQ3E776 120 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 92.9 ms