RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 RHOT2Q8IXI1 618 aa12.54□□□□□ -0.4
BBS4-213ENST00000567279 SYCE1Q8N0S2 351 aa12.54□□□□□ -0.4
BBS4-213ENST00000567279 CXCL16Q9H2A7 254 aa12.54□□□□□ -0.4
BBS4-213ENST00000567279 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
BBS4-213ENST00000567279 GNRH1P01148 92 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 INHAP05111 366 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 PRLRP16471 622 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 AKAP5P24588 427 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 UBXN11Q5T124 520 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 TWF2Q6IBS0 349 aaKnown RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 CCSAPQ6IQ19 270 aaPredicted RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 SERINC5Q86VE9 423 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 CXorf38Q8TB03 319 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 ANKRD7Q92527 254 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 MMS19Q96T76 1030 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 SMYD3Q9H7B4 428 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 COG5Q9UP83 839 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 BUB1BO60566 1050 aaPredicted RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 KIF4AO95239 1232 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 CFHP08603 1231 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 P4HA1P13674 534 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 BRD2P25440 801 aaKnown RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 RBP5P82980 135 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 RPS6KA1Q15418 735 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 PTGISQ16647 500 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 HPDLQ96IR7 371 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 BCO2Q9BYV7 579 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 SENP6Q9GZR1 1112 aaPredicted RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 SDCBP2Q9H190 292 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 KLK14Q9P0G3 267 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 PARP2Q9UGN5 583 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
BBS4-213ENST00000567279 GTF3C4Q9UKN8 822 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 DERAQ9Y315 318 aa12.53□□□□□ -0.4
BBS4-213ENST00000567279 GRIN2DO15399 1336 aa12.52□□□□□ -0.4
BBS4-213ENST00000567279 TMEM110-MUSTN1A8MSY1 372 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
BBS4-213ENST00000567279 CYP1A1P04798 512 aaPredicted RBP12.52□□□□□ -0.41
BBS4-213ENST00000567279 CYP1A2P05177 515 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.41
BBS4-213ENST00000567279 NSFP46459 744 aaKnown RBP12.52□□□□□ -0.41
BBS4-213ENST00000567279 SLFN11Q7Z7L1 901 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 CPA5Q8WXQ8 436 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 CYFIP2Q96F07 1278 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 NUP85Q9BW27 656 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 VRTNQ9H8Y1 702 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 RNF19AQ9NV58 838 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 EHD2Q9NZN4 543 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 CNTN3Q9P232 1028 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 CNOT8Q9UFF9 292 aaKnown RBP12.52□□□□□ -0.41
BBS4-213ENST00000567279 AMFRQ9UKV5 643 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 IPPQ9Y573 584 aa12.52□□□□□ -0.41
BBS4-213ENST00000567279 RPLP2P05387 115 aaKnown RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 THPOP40225 353 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 ACLYP53396 1101 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 HADHBP55084 474 aaKnown RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 CDH8P55286 799 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 TNNC1P63316 161 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 NOMO3P69849 1222 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 CENPCQ03188 943 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 MGAT3Q09327 533 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 CREG2Q8IUH2 290 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 ZNF564Q8TBZ8 553 aaPredicted RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 RABGGTAQ92696 567 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 TRIM11Q96F44 468 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 EPC1Q9H2F5 836 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 SCN1AP35498 2009 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 KCNK3O14649 394 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 PPEF2O14830 753 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 CABYRO75952 493 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 CHRNA1P02708 482 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 CD19P15391 556 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 C2orf54Q08AI8 447 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
BBS4-213ENST00000567279 NFX1Q12986 1120 aaKnown RBP12.51□□□□□ -0.41
BBS4-213ENST00000567279 ORC1Q13415 861 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms