RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TWF1Q12792 350 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 STARD3Q14849 445 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 ZSCAN26Q16670 478 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 PADI6Q6TGC4 694 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 LPCAT2Q7L5N7 544 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 SETD7Q8WTS6 366 aaKnown RBP8.23□□□□□ -1.09
GNE-205ENST00000539815 VWCEQ96DN2 955 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 ABI2Q9NYB9 513 aaPredicted RBP8.23□□□□□ -1.09
GNE-205ENST00000539815 FNIP2Q9P278 1114 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 EPS15L1Q9UBC2 864 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 MYH4Q9Y623 1939 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 TMEM150BA6NC51 233 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 GOLGA8CPA6NN73 597 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 I3L4J1 428 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 SLC30A4O14863 429 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 FSCN2O14926 492 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 LRP3O75074 770 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 GPR32O75388 356 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 DDHD2O94830 711 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 IFNAR1P17181 557 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 ABCD1P33897 745 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 DPP6P42658 865 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 PEX3P56589 373 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 RPL10AP62906 217 aaKnown RBP8.23□□□□□ -1.09
GNE-205ENST00000539815 SIM1P81133 766 aaPredicted RBP8.23□□□□□ -1.09
GNE-205ENST00000539815 DSC3Q14574 896 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 FBXO43Q4G163 708 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 TAF1BQ53T94 588 aaPredicted RBP8.23□□□□□ -1.09
GNE-205ENST00000539815 SWT1Q5T5J6 900 aaKnown RBP8.23□□□□□ -1.09
GNE-205ENST00000539815 TPGS2Q68CL5 300 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 ANO7Q6IWH7 933 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 C4orf19Q8IY42 314 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 MIR1-1HGQ9H1L0 117 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 DEF6Q9H4E7 631 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 RMI1Q9H9A7 625 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.094e-6■■■■■ 139.7
GNE-205ENST00000539815 PCDHB6Q9Y5E3 794 aa8.23□□□□□ -1.09
GNE-205ENST00000539815 CNTNAP5Q8WYK1 1306 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 TBX3O15119 743 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 NAP1L1P55209 391 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 E2F5Q15329 346 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 CCDC6Q16204 474 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 SYCP2LQ5T4T6 812 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 OVOS1Q6IE37 1185 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 SNX19Q92543 992 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 TMEM209Q96SK2 561 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 GPR62Q9BZJ7 368 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 LHX6Q9UPM6 363 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 KRBA1A5PL33 1030 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 MEI4A8MW99 385 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 HUS1O60921 280 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 KRT37O76014 449 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 ODC1P11926 461 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 CALRP27797 417 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 HTR4Q13639 388 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 ZNF461Q8TAF7 563 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 ZCCHC14Q8WYQ9 949 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 EIF2AK1Q9BQI3 630 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 SCN5AQ14524 2016 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 TBC1D3BA6NDS4 549 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 PODXLO00592 558 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 SLC9A3R1O14745 358 aaPredicted RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 ZNF862O60290 1169 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 SYPP08247 313 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 ARF4P18085 180 aaPredicted RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 TARSP26639 723 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 BRCC3P46736 316 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 PDE6CP51160 858 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 HMGN5P82970 282 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 NFE2Q16621 373 aaPredicted RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 STPG1Q5TH74 334 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 RTL10Q7L3V2 364 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 UCMAQ8WVF2 138 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 ANKRD7Q92527 254 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 SLC2A4RGQ9NR83 387 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 UXTQ9UBK9 157 aaPredicted RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 APOBEC2Q9Y235 224 aaKnown RBP8.22□□□□□ -1.09
GNE-205ENST00000539815 TELO2Q9Y4R8 837 aa8.22□□□□□ -1.09
GNE-205ENST00000539815 ATG7O95352 703 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 IDEP14735 1019 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 HOXC8P31273 242 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 LMAN2Q12907 356 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 KYAT1Q16773 422 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 TRIM74Q86UV6 250 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 TRIM73Q86UV7 250 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 PACS2Q86VP3 889 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 ARL10Q8N8L6 244 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 ITFG1Q8TB96 612 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.09
GNE-205ENST00000539815 GKN1Q9NS71 199 aa8.21□□□□□ -1.09
GNE-205ENST00000539815 UBQLN1Q9UMX0 589 aaKnown RBP8.21□□□□□ -1.09
GNE-205ENST00000539815 A0A1B0GUL6 1792 aa8.21□□□□□ -1.1
GNE-205ENST00000539815 TTLL13PA6NNM8 815 aa8.21□□□□□ -1.1
GNE-205ENST00000539815 C4orf47A7E2U8 309 aa8.21□□□□□ -1.1
GNE-205ENST00000539815 ECI2O75521 394 aa8.21□□□□□ -1.1
GNE-205ENST00000539815 GJA1P17302 382 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms