RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 NCALDP61601 193 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 ELMO2Q96JJ3 720 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 CNDP1Q96KN2 507 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 MTA3Q9BTC8 594 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 PLEKHA5Q9HAU0 1116 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 PCMTD2Q9NV79 361 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 STMN3Q9NZ72 180 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 IQGAP3Q86VI3 1631 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 LRRIQ3A6PVS8 624 aaPredicted RBP11.74□□□□□ -0.53
RAD50-201ENST00000378823 CYTH3O43739 400 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 RGS4P49798 205 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 PTK7Q13308 1070 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 APOBEC3FQ8IUX4 373 aaKnown RBP11.74□□□□□ -0.53
RAD50-201ENST00000378823 CCDC103Q8IW40 242 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 APPL2Q8NEU8 664 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 APPL1Q9UKG1 709 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 PCDHA10Q9Y5I2 948 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 CPDO75976 1380 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 ENO4A6NNW6 628 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 CACNB3P54284 484 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 HAUS6Q7Z4H7 955 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 SH2D3CQ8N5H7 860 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 ERP27Q96DN0 273 aa11.74□□□□□ -0.53
RAD50-201ENST00000378823 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
RAD50-201ENST00000378823 EVPLLA8MZ36 301 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 CPB1P15086 417 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 AKT1P31749 480 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SULT1E1P49888 294 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 MRPS35P82673 323 aaKnown RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 HPCAP84074 193 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 CPA5Q8WXQ8 436 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 FAM129AQ9BZQ8 928 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 ALBP02768 609 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SOX6P35712 828 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 PLOD1Q02809 727 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 MTF1Q14872 753 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 ANGPT1Q15389 498 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 VPS37AQ8NEZ2 397 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 CALML6Q8TD86 181 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 KDM6BO15054 1643 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 ZCCHC11Q5TAX3 1644 aaKnown RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 CYP2D6P10635 497 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 TCN1P20061 433 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 NCKAP1LP55160 1127 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 TWF1Q12792 350 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 PDIA5Q14554 519 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 KIZQ2M2Z5 673 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 WDR72Q3MJ13 1102 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 TRIM69Q86WT6 500 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SPATA2LQ8IUW3 424 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 TMEM260Q9NX78 707 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 SERPINB3P29508 390 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 TP53BP2Q13625 1128 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 USP10Q14694 798 aaKnown RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 SYCP2LQ5T4T6 812 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SUPT3HB4E1H0 165 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 EIF3DO15371 548 aaKnown RBP eCLIP11.73□□□□□ -0.53
RAD50-201ENST00000378823 TRIP4Q15650 581 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 GJC2Q5T442 439 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 TRAPPC11Q7Z392 1133 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 LUZP2Q86TE4 346 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 PSMA4P25789 261 aaKnown RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 PRDX5P30044 214 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SPRP35270 261 aaPredicted RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 COPB2P35606 906 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 DSG1Q02413 1049 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SHC4Q6S5L8 630 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.73□□□□□ -0.534e-6■■■■■ 32.9
RAD50-201ENST00000378823 ADGRL3Q9HAR2 1447 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 FMO5P49326 533 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 GPSM2P81274 684 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 KRR1Q13601 381 aaKnown RBP11.73□□□□□ -0.53
RAD50-201ENST00000378823 TRIP10Q15642 601 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 IFNEQ86WN2 208 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 WNK4Q96J92 1243 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 CNBD2Q96M20 576 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 CPVLQ9H3G5 476 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 CD274Q9NZQ7 290 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 GRID1Q9ULK0 1009 aa11.73□□□□□ -0.53
RAD50-201ENST00000378823 SSU72P8A0A1W2PR75 194 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 F5H6K3 240 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 NBNO60934 754 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 HSPA13P48723 471 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 KLRC3Q07444 240 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 NCOA4Q13772 614 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms