RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF667Q5HYK9 610 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 RHOT2Q8IXI1 618 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 ZMAT2Q96NC0 199 aaKnown RBP23.9■■□□□ 1.42
SIX3-201ENST00000260653 APOL6Q9BWW8 343 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 DPP3Q9NY33 737 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 CTTNBP2NLQ9P2B4 639 aa23.9■■□□□ 1.42
SIX3-201ENST00000260653 THAP12O43422 761 aa23.89■■□□□ 1.42
SIX3-201ENST00000260653 PASD1Q8IV76 773 aa23.89■■□□□ 1.42
SIX3-201ENST00000260653 PDCL3Q9H2J4 239 aa23.89■■□□□ 1.42
SIX3-201ENST00000260653 EHD2Q9NZN4 543 aa23.89■■□□□ 1.42
SIX3-201ENST00000260653 CDY2AQ9Y6F7 541 aa23.89■■□□□ 1.42
SIX3-201ENST00000260653 GRIN2DO15399 1336 aa23.89■■□□□ 1.42
SIX3-201ENST00000260653 CTSHP09668 335 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 CST5P28325 142 aaPredicted RBP23.89■■□□□ 1.41
SIX3-201ENST00000260653 CKAP4Q07065 602 aaKnown RBP23.89■■□□□ 1.41
SIX3-201ENST00000260653 SERINC5Q86VE9 423 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 FAM228AQ86W67 206 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 CD302Q8IX05 232 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 NOA1Q8NC60 698 aaKnown RBP23.89■■□□□ 1.41
SIX3-201ENST00000260653 CPA5Q8WXQ8 436 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 ZNF653Q96CK0 615 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 CYFIP2Q96F07 1278 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 SMARCAL1Q9NZC9 954 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 DDX20Q9UHI6 824 aaKnown RBP23.89■■□□□ 1.41
SIX3-201ENST00000260653 AGAP1Q9UPQ3 857 aa23.89■■□□□ 1.41
SIX3-201ENST00000260653 NOC2LQ9Y3T9 749 aaKnown RBP23.89■■□□□ 1.41
SIX3-201ENST00000260653 RECQL4O94761 1208 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 ZSCAN20P17040 1043 aaPredicted RBP23.88■■□□□ 1.41
SIX3-201ENST00000260653 AKAP5P24588 427 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 YARSP54577 528 aaKnown RBP23.88■■□□□ 1.41
SIX3-201ENST00000260653 UBXN11Q5T124 520 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 NAA35Q5VZE5 725 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 PEX26Q7Z412 305 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 NT5DC4Q86YG4 428 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 PLEKHA5Q9HAU0 1116 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 RNF19AQ9NV58 838 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 ITGA11Q9UKX5 1188 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 M0QZ92 97 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 GLRA4Q5JXX5 417 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 SYCE1Q8N0S2 351 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 RABGGTAQ92696 567 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 BCO2Q9BYV7 579 aa23.88■■□□□ 1.41
SIX3-201ENST00000260653 KIF4AO95239 1232 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 CYP1A1P04798 512 aaPredicted RBP23.87■■□□□ 1.41
SIX3-201ENST00000260653 CDH8P55286 799 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 RPS6KA1Q15418 735 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 NT5DC3Q86UY8 548 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 HPDLQ96IR7 371 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 SDCBP2Q9H190 292 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 SMYD3Q9H7B4 428 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 GTF3C4Q9UKN8 822 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 ZNF606Q8WXB4 792 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 MS4A14Q96JA4 679 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 STXBP5LQ9Y2K9 1186 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 TRPV2Q9Y5S1 764 aa23.87■■□□□ 1.41
SIX3-201ENST00000260653 CYP1A2P05177 515 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 ATICP31939 592 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 HADHBP55084 474 aaKnown RBP23.86■■□□□ 1.41
SIX3-201ENST00000260653 CENPCQ03188 943 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 TCEAL1Q15170 157 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 RSPH3Q86UC2 560 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 ZSWIM1Q9BR11 485 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 RNF39Q9H2S5 420 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 VRTNQ9H8Y1 702 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 SCN1AP35498 2009 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 C2CD6Q53TS8 623 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 ALKAL1Q6UXT8 129 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 SESTD1Q86VW0 696 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 PCSK9Q8NBP7 692 aaKnown RBP23.86■■□□□ 1.41
SIX3-201ENST00000260653 NUP85Q9BW27 656 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 ABCB6Q9NP58 842 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 TUBGCP4Q9UGJ1 667 aa23.86■■□□□ 1.41
SIX3-201ENST00000260653 CHRNA1P02708 482 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 NOMO3P69849 1222 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 RBP5P82980 135 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 MCOLN2Q8IZK6 566 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 PXYLP1Q8TE99 480 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 C18orf25Q96B23 403 aaPredicted RBP23.85■■□□□ 1.41
SIX3-201ENST00000260653 SENP6Q9GZR1 1112 aaPredicted RBP23.85■■□□□ 1.41
SIX3-201ENST00000260653 KLK14Q9P0G3 267 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 CNTN3Q9P232 1028 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 DERAQ9Y315 318 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 KCNK3O14649 394 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 NSFP46459 744 aaKnown RBP23.85■■□□□ 1.41
SIX3-201ENST00000260653 FBXO38Q6PIJ6 1188 aa23.85■■□□□ 1.41
SIX3-201ENST00000260653 GPR161Q8N6U8 529 aaKnown RBP23.85■■□□□ 1.41
SIX3-201ENST00000260653 CNOT8Q9UFF9 292 aaKnown RBP23.85■■□□□ 1.41
SIX3-201ENST00000260653 YWHAEP62258 255 aaKnown RBP23.84■■□□□ 1.41
SIX3-201ENST00000260653 PTGISQ16647 500 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 CCDC181Q5TID7 509 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 TWF2Q6IBS0 349 aaKnown RBP23.84■■□□□ 1.41
SIX3-201ENST00000260653 TRIM72Q6ZMU5 477 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 RNF180Q86T96 592 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 ZNF296Q8WUU4 475 aaPredicted RBP23.84■■□□□ 1.41
SIX3-201ENST00000260653 TFAP2BQ92481 460 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 IPPQ9Y573 584 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 PDCD11Q14690 1871 aaKnown RBP23.84■■□□□ 1.41
SIX3-201ENST00000260653 PPEF2O14830 753 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 INHAP05111 366 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 ZBTB6Q15916 424 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms