RNA–Protein interactions for RNA: tA(AGC)J

tA(AGC)J, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)J, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)JtA(AGC)J RPN1P38764 993 aaKnown RBP10.65□□□□□ -0.7
tA(AGC)JtA(AGC)J SYF1Q04048 859 aaPredicted RBP10.65□□□□□ -0.7
tA(AGC)JtA(AGC)J YLR271WQ06152 274 aa10.64□□□□□ -0.71
tA(AGC)JtA(AGC)J GRX6Q12438 231 aa10.64□□□□□ -0.71
tA(AGC)JtA(AGC)J SAS4Q04003 481 aa10.63□□□□□ -0.71
tA(AGC)JtA(AGC)J RPS9BP05755 195 aaKnown RBP10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J RET1P22276 1149 aaKnown RBP10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J DNM1P54861 757 aa10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J SRT1Q03175 343 aa10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J FCP1Q03254 732 aa10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J PKH1Q03407 766 aa10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J DIP2Q12220 943 aaPredicted RBP10.62□□□□□ -0.71
tA(AGC)JtA(AGC)J SWI1P09547 1314 aa10.61□□□□□ -0.71
tA(AGC)JtA(AGC)J THS1P04801 734 aaKnown RBP10.6□□□□□ -0.71
tA(AGC)JtA(AGC)J YDR306CQ06640 478 aa10.6□□□□□ -0.71
tA(AGC)JtA(AGC)J CST6P40535 587 aa10.59□□□□□ -0.71
tA(AGC)JtA(AGC)J YJR008WP47085 338 aa10.58□□□□□ -0.72
tA(AGC)JtA(AGC)J DPL1Q05567 589 aa10.58□□□□□ -0.72
tA(AGC)JtA(AGC)J NUP133P36161 1157 aa10.57□□□□□ -0.72
tA(AGC)JtA(AGC)J YLR278CQ05854 1341 aa10.57□□□□□ -0.72
tA(AGC)JtA(AGC)J MRP7P12687 371 aa10.56□□□□□ -0.72
tA(AGC)JtA(AGC)J GAP1P19145 602 aaPredicted RBP10.56□□□□□ -0.72
tA(AGC)JtA(AGC)J RTG2P32608 588 aaKnown RBP10.56□□□□□ -0.72
tA(AGC)JtA(AGC)J SUI2P20459 304 aaKnown RBP10.55□□□□□ -0.72
tA(AGC)JtA(AGC)J YGR122WP53272 402 aa10.55□□□□□ -0.72
tA(AGC)JtA(AGC)J FAS2P19097 1887 aaKnown RBP10.55□□□□□ -0.72
tA(AGC)JtA(AGC)J SET4P42948 560 aa10.54□□□□□ -0.72
tA(AGC)JtA(AGC)J ITC1P53125 1264 aa10.54□□□□□ -0.72
tA(AGC)JtA(AGC)J MSM1P22438 575 aa10.53□□□□□ -0.72
tA(AGC)JtA(AGC)J ICP55P40051 511 aa10.53□□□□□ -0.72
tA(AGC)JtA(AGC)J NSR1P27476 414 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
tA(AGC)JtA(AGC)J KRE2P27809 442 aa10.52□□□□□ -0.73
tA(AGC)JtA(AGC)J SET1P38827 1080 aaKnown RBP10.52□□□□□ -0.73
tA(AGC)JtA(AGC)J FET4P40988 552 aa10.52□□□□□ -0.73
tA(AGC)JtA(AGC)J DPH6Q12429 685 aa10.52□□□□□ -0.73
tA(AGC)JtA(AGC)J TRP5P00931 707 aaKnown RBP10.51□□□□□ -0.73
tA(AGC)JtA(AGC)J GLC3P32775 704 aa10.51□□□□□ -0.73
tA(AGC)JtA(AGC)J GAS5Q08193 484 aa10.51□□□□□ -0.73
tA(AGC)JtA(AGC)J PSH1Q12161 406 aa10.51□□□□□ -0.73
tA(AGC)JtA(AGC)J RPP0P05317 312 aaKnown RBP10.5□□□□□ -0.73
tA(AGC)JtA(AGC)J SWC3P31376 625 aa10.5□□□□□ -0.73
tA(AGC)JtA(AGC)J SPL2P38839 148 aa10.5□□□□□ -0.73
tA(AGC)JtA(AGC)J VHR2P40041 505 aa10.49□□□□□ -0.73
tA(AGC)JtA(AGC)J RPT4P53549 437 aaKnown RBP10.49□□□□□ -0.73
tA(AGC)JtA(AGC)J HKR1P41809 1802 aa10.49□□□□□ -0.73
tA(AGC)JtA(AGC)J MGM1P32266 881 aa10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J RAD24P32641 659 aa10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J NGR1P32831 672 aaKnown RBP10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J VPS27P40343 622 aaKnown RBP10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J HXT10P43581 546 aa10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J TRM44Q02648 567 aaKnown RBP10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J AIM7Q12156 149 aa10.48□□□□□ -0.73
tA(AGC)JtA(AGC)J AFG2P32794 780 aa10.47□□□□□ -0.73
tA(AGC)JtA(AGC)J TIF4632P39936 914 aaKnown RBP10.47□□□□□ -0.73
tA(AGC)JtA(AGC)J TIM50Q02776 476 aa10.47□□□□□ -0.73
tA(AGC)JtA(AGC)J THI3Q07471 609 aa10.47□□□□□ -0.73
tA(AGC)JtA(AGC)J SAC3P46674 1301 aa10.47□□□□□ -0.73
tA(AGC)JtA(AGC)J TOM1Q03280 3268 aa10.47□□□□□ -0.73
tA(AGC)JtA(AGC)J UBP12P39538 1254 aa10.46□□□□□ -0.73
tA(AGC)JtA(AGC)J VPS4P52917 437 aa10.46□□□□□ -0.73
tA(AGC)JtA(AGC)J NOP8Q08287 484 aaPredicted RBP10.46□□□□□ -0.73
tA(AGC)JtA(AGC)J RRG1Q12167 365 aaPredicted RBP10.46□□□□□ -0.73
tA(AGC)JtA(AGC)J GSM1P42950 618 aa10.45□□□□□ -0.74
tA(AGC)JtA(AGC)J YPP1P46951 817 aa10.45□□□□□ -0.74
tA(AGC)JtA(AGC)J YGR117CP53270 476 aa10.45□□□□□ -0.74
tA(AGC)JtA(AGC)J MTC5Q03897 1148 aa10.45□□□□□ -0.74
tA(AGC)JtA(AGC)J UBX2Q04228 584 aa10.45□□□□□ -0.74
tA(AGC)JtA(AGC)J FIG2P25653 1609 aa10.44□□□□□ -0.74
tA(AGC)JtA(AGC)J STV1P37296 890 aa10.44□□□□□ -0.74
tA(AGC)JtA(AGC)J CSI1Q04368 295 aa10.44□□□□□ -0.74
tA(AGC)JtA(AGC)J YIL089WP40500 205 aa10.43□□□□□ -0.74
tA(AGC)JtA(AGC)J HPR1P17629 752 aaKnown RBP10.42□□□□□ -0.74
tA(AGC)JtA(AGC)J LCB1P25045 558 aaKnown RBP10.42□□□□□ -0.74
tA(AGC)JtA(AGC)J EMP47P43555 445 aa10.42□□□□□ -0.74
tA(AGC)JtA(AGC)J CRF1Q04930 467 aa10.42□□□□□ -0.74
tA(AGC)JtA(AGC)J TOS4Q06266 489 aa10.42□□□□□ -0.74
tA(AGC)JtA(AGC)J CDC45Q08032 650 aa10.42□□□□□ -0.74
tA(AGC)JtA(AGC)J BOI2P39969 1040 aa10.41□□□□□ -0.74
tA(AGC)JtA(AGC)J PEA2P40091 420 aa10.41□□□□□ -0.74
tA(AGC)JtA(AGC)J IRC4Q03036 179 aa10.41□□□□□ -0.74
tA(AGC)JtA(AGC)J SRC1Q03707 834 aa10.41□□□□□ -0.74
tA(AGC)JtA(AGC)J MAK21Q12176 1025 aaKnown RBP10.41□□□□□ -0.74
tA(AGC)JtA(AGC)J RVB2Q12464 471 aaKnown RBP10.41□□□□□ -0.74
tA(AGC)JtA(AGC)J FLO11P08640 1367 aa10.4□□□□□ -0.74
tA(AGC)JtA(AGC)J SUP35P05453 685 aaKnown RBP10.4□□□□□ -0.74
tA(AGC)JtA(AGC)J ETP1P38748 585 aaKnown RBP10.4□□□□□ -0.74
tA(AGC)JtA(AGC)J PRP42Q03776 544 aaKnown RBP10.4□□□□□ -0.74
tA(AGC)JtA(AGC)J SNU66Q12420 587 aaPredicted RBP10.4□□□□□ -0.74
tA(AGC)JtA(AGC)J DUS1P53759 423 aaKnown RBP10.38□□□□□ -0.75
tA(AGC)JtA(AGC)J RPS19AP07280 144 aaKnown RBP10.37□□□□□ -0.75
tA(AGC)JtA(AGC)J RPS19BP07281 144 aaPredicted RBP10.37□□□□□ -0.75
tA(AGC)JtA(AGC)J CWC15Q03772 175 aaKnown RBP10.37□□□□□ -0.75
tA(AGC)JtA(AGC)J DAL5P15365 543 aa10.36□□□□□ -0.75
tA(AGC)JtA(AGC)J SEN54Q02825 467 aaPredicted RBP10.36□□□□□ -0.75
tA(AGC)JtA(AGC)J ADR1P07248 1323 aa10.35□□□□□ -0.75
tA(AGC)JtA(AGC)J ARG82P07250 355 aa10.35□□□□□ -0.75
tA(AGC)JtA(AGC)J RPS7AP26786 190 aaKnown RBP10.35□□□□□ -0.75
tA(AGC)JtA(AGC)J NUG1P40010 520 aaKnown RBP10.35□□□□□ -0.75
tA(AGC)JtA(AGC)J YIL092WP40497 633 aa10.35□□□□□ -0.75
tA(AGC)JtA(AGC)J NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.35□□□□□ -0.75not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms