RNA–Protein interactions for RNA: tA(AGC)D

tA(AGC)D, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)D, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)DtA(AGC)D RPN1P38764 993 aaKnown RBP10.65□□□□□ -0.7
tA(AGC)DtA(AGC)D SYF1Q04048 859 aaPredicted RBP10.65□□□□□ -0.7
tA(AGC)DtA(AGC)D YLR271WQ06152 274 aa10.64□□□□□ -0.71
tA(AGC)DtA(AGC)D GRX6Q12438 231 aa10.64□□□□□ -0.71
tA(AGC)DtA(AGC)D SAS4Q04003 481 aa10.63□□□□□ -0.71
tA(AGC)DtA(AGC)D RPS9BP05755 195 aaKnown RBP10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D RET1P22276 1149 aaKnown RBP10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D DNM1P54861 757 aa10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D SRT1Q03175 343 aa10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D FCP1Q03254 732 aa10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D PKH1Q03407 766 aa10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D DIP2Q12220 943 aaPredicted RBP10.62□□□□□ -0.71
tA(AGC)DtA(AGC)D SWI1P09547 1314 aa10.61□□□□□ -0.71
tA(AGC)DtA(AGC)D THS1P04801 734 aaKnown RBP10.6□□□□□ -0.71
tA(AGC)DtA(AGC)D YDR306CQ06640 478 aa10.6□□□□□ -0.71
tA(AGC)DtA(AGC)D CST6P40535 587 aa10.59□□□□□ -0.71
tA(AGC)DtA(AGC)D YJR008WP47085 338 aa10.58□□□□□ -0.72
tA(AGC)DtA(AGC)D DPL1Q05567 589 aa10.58□□□□□ -0.72
tA(AGC)DtA(AGC)D NUP133P36161 1157 aa10.57□□□□□ -0.72
tA(AGC)DtA(AGC)D YLR278CQ05854 1341 aa10.57□□□□□ -0.72
tA(AGC)DtA(AGC)D MRP7P12687 371 aa10.56□□□□□ -0.72
tA(AGC)DtA(AGC)D GAP1P19145 602 aaPredicted RBP10.56□□□□□ -0.72
tA(AGC)DtA(AGC)D RTG2P32608 588 aaKnown RBP10.56□□□□□ -0.72
tA(AGC)DtA(AGC)D SUI2P20459 304 aaKnown RBP10.55□□□□□ -0.72
tA(AGC)DtA(AGC)D YGR122WP53272 402 aa10.55□□□□□ -0.72
tA(AGC)DtA(AGC)D FAS2P19097 1887 aaKnown RBP10.55□□□□□ -0.72
tA(AGC)DtA(AGC)D SET4P42948 560 aa10.54□□□□□ -0.72
tA(AGC)DtA(AGC)D ITC1P53125 1264 aa10.54□□□□□ -0.72
tA(AGC)DtA(AGC)D MSM1P22438 575 aa10.53□□□□□ -0.72
tA(AGC)DtA(AGC)D ICP55P40051 511 aa10.53□□□□□ -0.72
tA(AGC)DtA(AGC)D NSR1P27476 414 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
tA(AGC)DtA(AGC)D KRE2P27809 442 aa10.52□□□□□ -0.73
tA(AGC)DtA(AGC)D SET1P38827 1080 aaKnown RBP10.52□□□□□ -0.73
tA(AGC)DtA(AGC)D FET4P40988 552 aa10.52□□□□□ -0.73
tA(AGC)DtA(AGC)D DPH6Q12429 685 aa10.52□□□□□ -0.73
tA(AGC)DtA(AGC)D TRP5P00931 707 aaKnown RBP10.51□□□□□ -0.73
tA(AGC)DtA(AGC)D GLC3P32775 704 aa10.51□□□□□ -0.73
tA(AGC)DtA(AGC)D GAS5Q08193 484 aa10.51□□□□□ -0.73
tA(AGC)DtA(AGC)D PSH1Q12161 406 aa10.51□□□□□ -0.73
tA(AGC)DtA(AGC)D RPP0P05317 312 aaKnown RBP10.5□□□□□ -0.73
tA(AGC)DtA(AGC)D SWC3P31376 625 aa10.5□□□□□ -0.73
tA(AGC)DtA(AGC)D SPL2P38839 148 aa10.5□□□□□ -0.73
tA(AGC)DtA(AGC)D VHR2P40041 505 aa10.49□□□□□ -0.73
tA(AGC)DtA(AGC)D RPT4P53549 437 aaKnown RBP10.49□□□□□ -0.73
tA(AGC)DtA(AGC)D HKR1P41809 1802 aa10.49□□□□□ -0.73
tA(AGC)DtA(AGC)D MGM1P32266 881 aa10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D RAD24P32641 659 aa10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D NGR1P32831 672 aaKnown RBP10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D VPS27P40343 622 aaKnown RBP10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D HXT10P43581 546 aa10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D TRM44Q02648 567 aaKnown RBP10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D AIM7Q12156 149 aa10.48□□□□□ -0.73
tA(AGC)DtA(AGC)D AFG2P32794 780 aa10.47□□□□□ -0.73
tA(AGC)DtA(AGC)D TIF4632P39936 914 aaKnown RBP10.47□□□□□ -0.73
tA(AGC)DtA(AGC)D TIM50Q02776 476 aa10.47□□□□□ -0.73
tA(AGC)DtA(AGC)D THI3Q07471 609 aa10.47□□□□□ -0.73
tA(AGC)DtA(AGC)D SAC3P46674 1301 aa10.47□□□□□ -0.73
tA(AGC)DtA(AGC)D TOM1Q03280 3268 aa10.47□□□□□ -0.73
tA(AGC)DtA(AGC)D UBP12P39538 1254 aa10.46□□□□□ -0.73
tA(AGC)DtA(AGC)D VPS4P52917 437 aa10.46□□□□□ -0.73
tA(AGC)DtA(AGC)D NOP8Q08287 484 aaPredicted RBP10.46□□□□□ -0.73
tA(AGC)DtA(AGC)D RRG1Q12167 365 aaPredicted RBP10.46□□□□□ -0.73
tA(AGC)DtA(AGC)D GSM1P42950 618 aa10.45□□□□□ -0.74
tA(AGC)DtA(AGC)D YPP1P46951 817 aa10.45□□□□□ -0.74
tA(AGC)DtA(AGC)D YGR117CP53270 476 aa10.45□□□□□ -0.74
tA(AGC)DtA(AGC)D MTC5Q03897 1148 aa10.45□□□□□ -0.74
tA(AGC)DtA(AGC)D UBX2Q04228 584 aa10.45□□□□□ -0.74
tA(AGC)DtA(AGC)D FIG2P25653 1609 aa10.44□□□□□ -0.74
tA(AGC)DtA(AGC)D STV1P37296 890 aa10.44□□□□□ -0.74
tA(AGC)DtA(AGC)D CSI1Q04368 295 aa10.44□□□□□ -0.74
tA(AGC)DtA(AGC)D YIL089WP40500 205 aa10.43□□□□□ -0.74
tA(AGC)DtA(AGC)D HPR1P17629 752 aaKnown RBP10.42□□□□□ -0.74
tA(AGC)DtA(AGC)D LCB1P25045 558 aaKnown RBP10.42□□□□□ -0.74
tA(AGC)DtA(AGC)D EMP47P43555 445 aa10.42□□□□□ -0.74
tA(AGC)DtA(AGC)D CRF1Q04930 467 aa10.42□□□□□ -0.74
tA(AGC)DtA(AGC)D TOS4Q06266 489 aa10.42□□□□□ -0.74
tA(AGC)DtA(AGC)D CDC45Q08032 650 aa10.42□□□□□ -0.74
tA(AGC)DtA(AGC)D BOI2P39969 1040 aa10.41□□□□□ -0.74
tA(AGC)DtA(AGC)D PEA2P40091 420 aa10.41□□□□□ -0.74
tA(AGC)DtA(AGC)D IRC4Q03036 179 aa10.41□□□□□ -0.74
tA(AGC)DtA(AGC)D SRC1Q03707 834 aa10.41□□□□□ -0.74
tA(AGC)DtA(AGC)D MAK21Q12176 1025 aaKnown RBP10.41□□□□□ -0.74
tA(AGC)DtA(AGC)D RVB2Q12464 471 aaKnown RBP10.41□□□□□ -0.74
tA(AGC)DtA(AGC)D FLO11P08640 1367 aa10.4□□□□□ -0.74
tA(AGC)DtA(AGC)D SUP35P05453 685 aaKnown RBP10.4□□□□□ -0.74
tA(AGC)DtA(AGC)D ETP1P38748 585 aaKnown RBP10.4□□□□□ -0.74
tA(AGC)DtA(AGC)D PRP42Q03776 544 aaKnown RBP10.4□□□□□ -0.74
tA(AGC)DtA(AGC)D SNU66Q12420 587 aaPredicted RBP10.4□□□□□ -0.74
tA(AGC)DtA(AGC)D DUS1P53759 423 aaKnown RBP10.38□□□□□ -0.75
tA(AGC)DtA(AGC)D RPS19AP07280 144 aaKnown RBP10.37□□□□□ -0.75
tA(AGC)DtA(AGC)D RPS19BP07281 144 aaPredicted RBP10.37□□□□□ -0.75
tA(AGC)DtA(AGC)D CWC15Q03772 175 aaKnown RBP10.37□□□□□ -0.75
tA(AGC)DtA(AGC)D DAL5P15365 543 aa10.36□□□□□ -0.75
tA(AGC)DtA(AGC)D SEN54Q02825 467 aaPredicted RBP10.36□□□□□ -0.75
tA(AGC)DtA(AGC)D ADR1P07248 1323 aa10.35□□□□□ -0.75
tA(AGC)DtA(AGC)D ARG82P07250 355 aa10.35□□□□□ -0.75
tA(AGC)DtA(AGC)D RPS7AP26786 190 aaKnown RBP10.35□□□□□ -0.75
tA(AGC)DtA(AGC)D NUG1P40010 520 aaKnown RBP10.35□□□□□ -0.75
tA(AGC)DtA(AGC)D YIL092WP40497 633 aa10.35□□□□□ -0.75
tA(AGC)DtA(AGC)D NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.35□□□□□ -0.75not detected
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms