RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C EDE1P34216 1381 aa6.18□□□□□ -1.42
SPN1YPR133C YPL062WQ02781 134 aa6.18□□□□□ -1.42
SPN1YPR133C UGA2P38067 497 aa6.17□□□□□ -1.42
SPN1YPR133C TAF5P38129 798 aa6.17□□□□□ -1.42
SPN1YPR133C RPN1P38764 993 aaKnown RBP6.17□□□□□ -1.42
SPN1YPR133C RTC1Q08281 1341 aa6.17□□□□□ -1.42
SPN1YPR133C YIL177CP40434 1758 aa6.16□□□□□ -1.42
SPN1YPR133C YJL225CP40889 1758 aa6.16□□□□□ -1.42
SPN1YPR133C CPS1P27614 576 aa6.16□□□□□ -1.42
SPN1YPR133C DOT5P40553 215 aa6.16□□□□□ -1.42
SPN1YPR133C BRE2P43132 505 aa6.16□□□□□ -1.42
SPN1YPR133C NIS1P53939 407 aa6.16□□□□□ -1.42
SPN1YPR133C PSK1P31374 1356 aa6.16□□□□□ -1.42
SPN1YPR133C GCD11P32481 527 aaKnown RBP6.15□□□□□ -1.42
SPN1YPR133C CST6P40535 587 aa6.15□□□□□ -1.42
SPN1YPR133C TY1A-DR4O74302 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-HP0C2I4 478 aaKnown RBP6.14□□□□□ -1.43
SPN1YPR133C TY1A-AP0CX57 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-PR1P0CX58 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-ORP0CX59 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-PR2P0CX60 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-DR5P0CX65 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-ER2P0CX66 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-GR3P0CX67 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-LR1P0CX68 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-MR2P0CX69 440 aa6.14□□□□□ -1.43
SPN1YPR133C KEX2P13134 814 aa6.14□□□□□ -1.43
SPN1YPR133C SIT4P20604 311 aa6.14□□□□□ -1.43
SPN1YPR133C PRP5P21372 849 aaPredicted RBP6.14□□□□□ -1.43
SPN1YPR133C PAF1P38351 445 aa6.14□□□□□ -1.43
SPN1YPR133C NPR2P39923 615 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-JR2P47099 440 aa6.14□□□□□ -1.43
SPN1YPR133C LYS4P49367 693 aaPredicted RBP6.14□□□□□ -1.43
SPN1YPR133C GCR2Q01722 534 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-DR1Q03856 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-ML1Q04706 440 aaKnown RBP6.14□□□□□ -1.43
SPN1YPR133C TY1A-BRQ12217 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-NL2Q12470 440 aa6.14□□□□□ -1.43
SPN1YPR133C TY1A-GR2Q12485 440 aa6.14□□□□□ -1.43
SPN1YPR133C ROM2P51862 1356 aaKnown RBP6.14□□□□□ -1.43
SPN1YPR133C SSA2P10592 639 aaKnown RBP6.13□□□□□ -1.43
SPN1YPR133C SPT16P32558 1035 aaKnown RBP6.13□□□□□ -1.43
SPN1YPR133C RTF1P53064 558 aa6.13□□□□□ -1.43
SPN1YPR133C FOX2Q02207 900 aaKnown RBP6.13□□□□□ -1.43
SPN1YPR133C LAM6Q08001 693 aa6.13□□□□□ -1.43
SPN1YPR133C SNF2P22082 1703 aa6.13□□□□□ -1.43
SPN1YPR133C SEC2P17065 759 aa6.12□□□□□ -1.43
SPN1YPR133C AIR1P40507 360 aaKnown RBP6.12□□□□□ -1.43
SPN1YPR133C ALD2P47771 506 aa6.12□□□□□ -1.43
SPN1YPR133C MSB3P48566 633 aaPredicted RBP6.12□□□□□ -1.43
SPN1YPR133C FPK1P53739 893 aa6.12□□□□□ -1.43
SPN1YPR133C YNL115CP53925 644 aa6.12□□□□□ -1.43
SPN1YPR133C RRD1P40454 393 aaKnown RBP6.11□□□□□ -1.43
SPN1YPR133C RCM1P53972 490 aa6.11□□□□□ -1.43
SPN1YPR133C ERF2Q06551 359 aa6.11□□□□□ -1.43
SPN1YPR133C APC1P53886 1748 aa6.11□□□□□ -1.43
SPN1YPR133C ADE6P38972 1358 aaKnown RBP6.1□□□□□ -1.43
SPN1YPR133C RSF2P46974 1380 aa6.1□□□□□ -1.43
SPN1YPR133C KIN1P13185 1064 aa6.1□□□□□ -1.43
SPN1YPR133C CTH1P47976 325 aa6.1□□□□□ -1.43
SPN1YPR133C CLA4P48562 842 aa6.1□□□□□ -1.43
SPN1YPR133C RIM15P43565 1770 aa6.1□□□□□ -1.43
SPN1YPR133C NAP1P25293 417 aaKnown RBP6.09□□□□□ -1.43
SPN1YPR133C PPH3P32345 308 aa6.09□□□□□ -1.43
SPN1YPR133C YJL181WP46987 611 aa6.09□□□□□ -1.43
SPN1YPR133C HST2P53686 357 aa6.09□□□□□ -1.43
SPN1YPR133C CDC4P07834 779 aa6.08□□□□□ -1.44
SPN1YPR133C PAT1P25644 796 aaKnown RBP6.08□□□□□ -1.44
SPN1YPR133C RRN7P40992 514 aa6.07□□□□□ -1.44
SPN1YPR133C FRK1Q03002 865 aaPredicted RBP6.07□□□□□ -1.44
SPN1YPR133C TAF8Q03750 510 aa6.07□□□□□ -1.44
SPN1YPR133C TCB1Q12466 1186 aa6.07□□□□□ -1.44
SPN1YPR133C YEF3P16521 1044 aaKnown RBP6.06□□□□□ -1.44
SPN1YPR133C PRP40P33203 583 aaKnown RBP6.06□□□□□ -1.44
SPN1YPR133C SLY41P22215 453 aa6.05□□□□□ -1.44
SPN1YPR133C BDP1P46678 594 aa6.05□□□□□ -1.44
SPN1YPR133C AGE1Q04412 482 aa6.05□□□□□ -1.44
SPN1YPR133C MMP1Q12372 583 aa6.05□□□□□ -1.44
SPN1YPR133C SCJ1P25303 377 aa6.04□□□□□ -1.44
SPN1YPR133C GBP2P25555 427 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SPN1YPR133C GAR1P28007 205 aaKnown RBP6.04□□□□□ -1.44
SPN1YPR133C TUB4P53378 473 aa6.04□□□□□ -1.44
SPN1YPR133C YKR075CP36155 307 aa6.03□□□□□ -1.44
SPN1YPR133C CSN12P47130 423 aa6.03□□□□□ -1.44
SPN1YPR133C HED1Q03937 162 aa6.03□□□□□ -1.44
SPN1YPR133C SLM3Q12093 417 aa6.03□□□□□ -1.44
SPN1YPR133C COBP00163 385 aa6.02□□□□□ -1.45
SPN1YPR133C ESL2P36168 1195 aa6.02□□□□□ -1.45
SPN1YPR133C PAC1P39946 494 aaKnown RBP6.02□□□□□ -1.45
SPN1YPR133C TYW1Q08960 810 aaKnown RBP6.02□□□□□ -1.45
SPN1YPR133C ESS1P22696 170 aa6.01□□□□□ -1.45
SPN1YPR133C KTR1P27810 393 aaKnown RBP6.01□□□□□ -1.45
SPN1YPR133C YKL133CP36066 463 aa6.01□□□□□ -1.45
SPN1YPR133C NOP7P53261 605 aaKnown RBP6.01□□□□□ -1.45
SPN1YPR133C YRF1-4O13559 1382 aa6.01□□□□□ -1.45
SPN1YPR133C PUS6P53294 404 aa6□□□□□ -1.45
SPN1YPR133C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
SPN1YPR133C TRM1P15565 570 aaKnown RBP5.98□□□□□ -1.45
SPN1YPR133C YJU3P28321 313 aa5.98□□□□□ -1.45
SPN1YPR133C MET22P32179 357 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms