RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W SSF1P38789 453 aaPredicted RBP11.3□□□□□ -0.6
BRR1YPR057W ITC1P53125 1264 aa11.3□□□□□ -0.6
BRR1YPR057W BUD31P25337 157 aaPredicted RBP11.28□□□□□ -0.6
BRR1YPR057W BDP1P46678 594 aa11.28□□□□□ -0.6
BRR1YPR057W FCP1Q03254 732 aa11.28□□□□□ -0.6
BRR1YPR057W MTC5Q03897 1148 aa11.28□□□□□ -0.6
BRR1YPR057W PSH1Q12161 406 aa11.28□□□□□ -0.6
BRR1YPR057W NCB2Q92317 146 aa11.28□□□□□ -0.6
BRR1YPR057W RIM15P43565 1770 aa11.27□□□□□ -0.61
BRR1YPR057W OPY1P38271 328 aa11.27□□□□□ -0.61
BRR1YPR057W SUP35P05453 685 aaKnown RBP11.26□□□□□ -0.61
BRR1YPR057W HXT10P43581 546 aa11.26□□□□□ -0.61
BRR1YPR057W LYS4P49367 693 aaPredicted RBP11.26□□□□□ -0.61
BRR1YPR057W BUG1Q12191 341 aa11.26□□□□□ -0.61
BRR1YPR057W GCR2Q01722 534 aa11.24□□□□□ -0.61
BRR1YPR057W ECM21P38167 1117 aaKnown RBP11.23□□□□□ -0.61
BRR1YPR057W HAT1Q12341 374 aa11.23□□□□□ -0.61
BRR1YPR057W SSK22P25390 1331 aaPredicted RBP11.23□□□□□ -0.61
BRR1YPR057W NOT3P06102 836 aaKnown RBP11.22□□□□□ -0.61
BRR1YPR057W DLD1P32891 587 aa11.22□□□□□ -0.61
BRR1YPR057W BDF1P35817 686 aa11.22□□□□□ -0.61
BRR1YPR057W BRN1P38170 754 aa11.22□□□□□ -0.61
BRR1YPR057W SAC3P46674 1301 aa11.22□□□□□ -0.61
BRR1YPR057W UTP22P53254 1237 aaPredicted RBP11.22□□□□□ -0.61
BRR1YPR057W PDR18P53756 1333 aa11.21□□□□□ -0.61
BRR1YPR057W YGL242CP53066 181 aa11.21□□□□□ -0.61
BRR1YPR057W VAS1P07806 1104 aaKnown RBP11.2□□□□□ -0.62
BRR1YPR057W IME2P32581 645 aa11.2□□□□□ -0.62
BRR1YPR057W CTH1P47976 325 aa11.2□□□□□ -0.62
BRR1YPR057W MLC1P53141 149 aa11.2□□□□□ -0.62
BRR1YPR057W SNU66Q12420 587 aaPredicted RBP11.2□□□□□ -0.62
BRR1YPR057W KTR3P38130 404 aaPredicted RBP11.19□□□□□ -0.62
BRR1YPR057W RAT1Q02792 1006 aaKnown RBP11.19□□□□□ -0.62
BRR1YPR057W GYP5Q12344 894 aa11.19□□□□□ -0.62
BRR1YPR057W RPG1P38249 964 aaKnown RBP11.18□□□□□ -0.62
BRR1YPR057W ALO1P54783 526 aaKnown RBP11.18□□□□□ -0.62
BRR1YPR057W BRE1Q07457 700 aaKnown RBP11.18□□□□□ -0.62
BRR1YPR057W PCT1P13259 424 aa11.17□□□□□ -0.62
BRR1YPR057W SLA1P32790 1244 aa11.17□□□□□ -0.62
BRR1YPR057W UBP16Q02863 499 aa11.17□□□□□ -0.62
BRR1YPR057W RMD1Q03441 430 aa11.17□□□□□ -0.62
BRR1YPR057W HXT13P39924 564 aa11.16□□□□□ -0.62
BRR1YPR057W ALD2P47771 506 aa11.16□□□□□ -0.62
BRR1YPR057W DIB1Q06819 143 aaPredicted RBP11.16□□□□□ -0.62
BRR1YPR057W CTI6Q08923 506 aa11.16□□□□□ -0.62
BRR1YPR057W SEC18P18759 758 aaKnown RBP11.15□□□□□ -0.62
BRR1YPR057W GTT3P39996 337 aa11.15□□□□□ -0.62
BRR1YPR057W MRPS35P53292 345 aa11.15□□□□□ -0.62
BRR1YPR057W HXT17P53631 564 aa11.15□□□□□ -0.62
BRR1YPR057W ALD3P54114 506 aa11.15□□□□□ -0.62
BRR1YPR057W TOS1P38288 455 aa11.14□□□□□ -0.63
BRR1YPR057W RIM20Q12033 661 aa11.14□□□□□ -0.63
BRR1YPR057W RLF2Q12495 606 aa11.14□□□□□ -0.63
BRR1YPR057W UTP10P42945 1769 aaKnown RBP11.13□□□□□ -0.63
BRR1YPR057W ADR1P07248 1323 aa11.13□□□□□ -0.63
BRR1YPR057W AI2P03876 854 aa11.13□□□□□ -0.63
BRR1YPR057W AAP1P37898 856 aaKnown RBP11.12□□□□□ -0.63
BRR1YPR057W YBL086CP38177 466 aa11.12□□□□□ -0.63
BRR1YPR057W FPR4Q06205 392 aaPredicted RBP11.12□□□□□ -0.63
BRR1YPR057W RIX7Q07844 837 aaKnown RBP11.12□□□□□ -0.63
BRR1YPR057W SSA2P10592 639 aaKnown RBP11.11□□□□□ -0.63
BRR1YPR057W KTR1P27810 393 aaKnown RBP11.11□□□□□ -0.63
BRR1YPR057W YNL193WP53870 558 aa11.11□□□□□ -0.63
BRR1YPR057W HPC2Q01448 625 aa11.11□□□□□ -0.63
BRR1YPR057W RPN7Q06103 429 aaKnown RBP11.11□□□□□ -0.63
BRR1YPR057W BDF2Q07442 638 aa11.11□□□□□ -0.63
BRR1YPR057W EPS1P40557 701 aa11.1□□□□□ -0.63
BRR1YPR057W PIB2P53191 635 aa11.1□□□□□ -0.63
BRR1YPR057W SYF1Q04048 859 aaPredicted RBP11.1□□□□□ -0.63
BRR1YPR057W PRI1P10363 409 aa11.09□□□□□ -0.63
BRR1YPR057W NGR1P32831 672 aaKnown RBP11.09□□□□□ -0.63
BRR1YPR057W UGA2P38067 497 aa11.09□□□□□ -0.63
BRR1YPR057W POM152P39685 1337 aa11.09□□□□□ -0.63
BRR1YPR057W TRL1P09880 827 aaKnown RBP11.08□□□□□ -0.64
BRR1YPR057W SRS2P12954 1174 aa11.08□□□□□ -0.64
BRR1YPR057W EAF7P53911 425 aaKnown RBP11.08□□□□□ -0.64
BRR1YPR057W DPH6Q12429 685 aa11.08□□□□□ -0.64
BRR1YPR057W OSH3P38713 996 aaKnown RBP11.07□□□□□ -0.64
BRR1YPR057W LSP1Q12230 341 aaKnown RBP11.07□□□□□ -0.64
BRR1YPR057W PIF1P07271 859 aa11.06□□□□□ -0.64
BRR1YPR057W RNR2P09938 399 aaKnown RBP11.06□□□□□ -0.64
BRR1YPR057W MGM1P32266 881 aa11.06□□□□□ -0.64
BRR1YPR057W VPS24P36095 224 aaKnown RBP11.06□□□□□ -0.64
BRR1YPR057W PBY1P38254 753 aa11.06□□□□□ -0.64
BRR1YPR057W HAL5P38970 855 aaKnown RBP11.06□□□□□ -0.64
BRR1YPR057W STM1P39015 273 aaKnown RBP11.06□□□□□ -0.64
BRR1YPR057W ICP55P40051 511 aa11.06□□□□□ -0.64
BRR1YPR057W SRC1Q03707 834 aa11.06□□□□□ -0.64
BRR1YPR057W THI3Q07471 609 aa11.06□□□□□ -0.64
BRR1YPR057W RRI2Q12348 645 aa11.06□□□□□ -0.64
BRR1YPR057W NUG1P40010 520 aaKnown RBP11.05□□□□□ -0.64
BRR1YPR057W GLO3P38682 493 aaKnown RBP11.04□□□□□ -0.64
BRR1YPR057W IRC3Q06683 689 aa11.04□□□□□ -0.64
BRR1YPR057W SIT4P20604 311 aa11.03□□□□□ -0.64
BRR1YPR057W OPI1P21957 404 aa11.03□□□□□ -0.64
BRR1YPR057W FRD1P32614 470 aaKnown RBP11.03□□□□□ -0.64
BRR1YPR057W PFF1P38244 976 aa11.03□□□□□ -0.64
BRR1YPR057W TPM1P17536 199 aaKnown RBP11.02□□□□□ -0.65
BRR1YPR057W AIM9P40053 627 aaKnown RBP11.02□□□□□ -0.65
BRR1YPR057W RPN1P38764 993 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms