RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	OLA1	P38219	394 aa	Known RBP	7.74	□□□□□ -1.17
VTS1	YOR359W	DMA1	P38823	416 aa		7.74	□□□□□ -1.17
VTS1	YOR359W	ILV3	P39522	585 aa	Known RBP	7.74	□□□□□ -1.17
VTS1	YOR359W	PDR5	P33302	1511 aa	Known RBP	7.74	□□□□□ -1.17
VTS1	YOR359W	SWI6	P09959	803 aa		7.73	□□□□□ -1.17
VTS1	YOR359W	BRF1	P29056	596 aa		7.73	□□□□□ -1.17
VTS1	YOR359W	EFB1	P32471	206 aa	Known RBP	7.73	□□□□□ -1.17
VTS1	YOR359W	TPS3	P38426	1054 aa	Known RBP	7.73	□□□□□ -1.17
VTS1	YOR359W	DNM1	P54861	757 aa		7.73	□□□□□ -1.17
VTS1	YOR359W	BPT1	P14772	1559 aa		7.73	□□□□□ -1.17
VTS1	YOR359W	TAF13	P11747	167 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	THR4	P16120	514 aa	Known RBP	7.72	□□□□□ -1.17
VTS1	YOR359W	PDI1	P17967	522 aa	Known RBP	7.72	□□□□□ -1.17
VTS1	YOR359W	RAD16	P31244	790 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	EXO84	P38261	753 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	XDJ1	P39102	459 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	SIT1	P39980	628 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	ARH1	P48360	493 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	HAP5	Q02516	242 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	RRB1	Q04225	511 aa	Known RBP	7.72	□□□□□ -1.17
VTS1	YOR359W	POL1	P13382	1468 aa		7.72	□□□□□ -1.17
VTS1	YOR359W	SEC14	P24280	304 aa	Known RBP	7.71	□□□□□ -1.17
VTS1	YOR359W	RPL5	P26321	297 aa	Known RBP	7.71	□□□□□ -1.17
VTS1	YOR359W	ASF1	P32447	279 aa		7.71	□□□□□ -1.17
VTS1	YOR359W	NUF2	P33895	451 aa		7.71	□□□□□ -1.17
VTS1	YOR359W	TOM71	P38825	639 aa	Known RBP	7.71	□□□□□ -1.17
VTS1	YOR359W	VPS41	P38959	992 aa		7.71	□□□□□ -1.17
VTS1	YOR359W	SAP1	P39955	897 aa	Known RBP	7.71	□□□□□ -1.17
VTS1	YOR359W	MPH1	P40562	993 aa		7.71	□□□□□ -1.17
VTS1	YOR359W	NUP145	P49687	1317 aa		7.71	□□□□□ -1.17
VTS1	YOR359W	MSH1	P25846	959 aa		7.71	□□□□□ -1.18
VTS1	YOR359W	SEC20	P28791	383 aa		7.71	□□□□□ -1.18
VTS1	YOR359W	GCD6	P32501	712 aa	Known RBP	7.71	□□□□□ -1.18
VTS1	YOR359W	PDS5	Q04264	1277 aa		7.71	□□□□□ -1.18
VTS1	YOR359W	YCF1	P39109	1515 aa	Known RBP	7.7	□□□□□ -1.18
VTS1	YOR359W	MET5	P47169	1442 aa		7.7	□□□□□ -1.18
VTS1	YOR359W	MIC60	P36112	540 aa		7.7	□□□□□ -1.18
VTS1	YOR359W	CCM1	P48237	864 aa	Predicted RBP	7.7	□□□□□ -1.18
VTS1	YOR359W	RPO31	P04051	1460 aa		7.7	□□□□□ -1.18
VTS1	YOR359W	MPH3	P0CE00	602 aa		7.69	□□□□□ -1.18
VTS1	YOR359W	PBY1	P38254	753 aa		7.69	□□□□□ -1.18
VTS1	YOR359W	LAM1	P38851	1228 aa		7.69	□□□□□ -1.18
VTS1	YOR359W	APL6	P46682	809 aa		7.69	□□□□□ -1.18
VTS1	YOR359W	UBX2	Q04228	584 aa		7.69	□□□□□ -1.18
VTS1	YOR359W	PSR1	Q07800	427 aa		7.69	□□□□□ -1.18
VTS1	YOR359W	AI4	P03878	556 aa		7.68	□□□□□ -1.18
VTS1	YOR359W	DAL5	P15365	543 aa		7.68	□□□□□ -1.18
VTS1	YOR359W	CDC3	P32457	520 aa	Known RBP	7.68	□□□□□ -1.18
VTS1	YOR359W	GDT1	P38301	280 aa	Predicted RBP	7.68	□□□□□ -1.18
VTS1	YOR359W	PEX29	Q03370	554 aa		7.68	□□□□□ -1.18
VTS1	YOR359W	YDR341C	Q05506	607 aa	Known RBP	7.68	□□□□□ -1.18
VTS1	YOR359W	NKP1	Q12493	238 aa		7.68	□□□□□ -1.18
VTS1	YOR359W	SHE4	P51534	789 aa		7.67	□□□□□ -1.18
VTS1	YOR359W	ARP5	P53946	755 aa		7.67	□□□□□ -1.18
VTS1	YOR359W	TIF3	P34167	436 aa	Known RBP	7.67	□□□□□ -1.18
VTS1	YOR359W	PET100	P38958	111 aa		7.67	□□□□□ -1.18
VTS1	YOR359W	HST2	P53686	357 aa		7.67	□□□□□ -1.18
VTS1	YOR359W	SYH1	Q02875	849 aa	Known RBP	7.67	□□□□□ -1.18
VTS1	YOR359W	ARO80	Q04052	950 aa		7.67	□□□□□ -1.18
VTS1	YOR359W	LSO1	Q3E827	93 aa		7.67	□□□□□ -1.18
VTS1	YOR359W	RFC1	P38630	861 aa	Known RBP	7.66	□□□□□ -1.18
VTS1	YOR359W	BEM4	P39011	633 aa		7.66	□□□□□ -1.18
VTS1	YOR359W	SEC26	P41810	973 aa	Known RBP	7.66	□□□□□ -1.18
VTS1	YOR359W	HUL5	P53119	910 aa		7.66	□□□□□ -1.18
VTS1	YOR359W	YNL247W	P53852	767 aa	Known RBP	7.66	□□□□□ -1.18
VTS1	YOR359W	SPO19	Q03029	223 aa		7.66	□□□□□ -1.18
VTS1	YOR359W	CYC8	P14922	966 aa		7.65	□□□□□ -1.18
VTS1	YOR359W	MRPS28	P21771	286 aa		7.65	□□□□□ -1.18
VTS1	YOR359W	SEC27	P41811	889 aa	Known RBP	7.65	□□□□□ -1.18
VTS1	YOR359W	INP52	P50942	1183 aa		7.65	□□□□□ -1.18
VTS1	YOR359W	IST1	P53843	298 aa	Predicted RBP	7.65	□□□□□ -1.18
VTS1	YOR359W	STE20	Q03497	939 aa	Known RBP	7.65	□□□□□ -1.18
VTS1	YOR359W	CLF1	Q12309	687 aa	Predicted RBP	7.65	□□□□□ -1.18
VTS1	YOR359W	ROM2	P51862	1356 aa	Known RBP	7.65	□□□□□ -1.18
VTS1	YOR359W	MRC1	P25588	1096 aa		7.64	□□□□□ -1.19
VTS1	YOR359W	YRB1	P41920	201 aa	Known RBP	7.64	□□□□□ -1.19
VTS1	YOR359W	TPO2	P53283	614 aa		7.64	□□□□□ -1.19
VTS1	YOR359W	ADE12	P80210	433 aa	Known RBP	7.64	□□□□□ -1.19
VTS1	YOR359W	VMS1	Q04311	632 aa	Known RBP	7.64	□□□□□ -1.19
VTS1	YOR359W	KOG1	P38873	1557 aa		7.64	□□□□□ -1.19
VTS1	YOR359W	HSP104	P31539	908 aa	Known RBP	7.63	□□□□□ -1.19
VTS1	YOR359W	INP2	Q03824	705 aa		7.63	□□□□□ -1.19
VTS1	YOR359W	ESC1	Q03661	1658 aa	Known RBP	7.63	□□□□□ -1.19
VTS1	YOR359W	YME2	P32843	850 aa		7.63	□□□□□ -1.19
VTS1	YOR359W	PKH1	Q03407	766 aa		7.63	□□□□□ -1.19
VTS1	YOR359W	TLG2	Q08144	397 aa		7.63	□□□□□ -1.19
VTS1	YOR359W	YPL225W	Q08971	146 aa	Known RBP	7.63	□□□□□ -1.19
VTS1	YOR359W	DPS1	P04802	557 aa	Known RBP	7.62	□□□□□ -1.19
VTS1	YOR359W	ARD1	P07347	238 aa	Predicted RBP	7.62	□□□□□ -1.19
VTS1	YOR359W	RRP1	P35178	278 aa	Predicted RBP	7.62	□□□□□ -1.19
VTS1	YOR359W	SPT23	P35210	1082 aa		7.62	□□□□□ -1.19
VTS1	YOR359W	BTN2	P53286	410 aa		7.62	□□□□□ -1.19
VTS1	YOR359W	YGR273C	P53329	174 aa		7.62	□□□□□ -1.19
VTS1	YOR359W	UTP4	Q06679	776 aa	Known RBP	7.62	□□□□□ -1.19
VTS1	YOR359W	SLX4	Q12098	748 aa		7.62	□□□□□ -1.19
VTS1	YOR359W	ARO1	P08566	1588 aa	Known RBP	7.61	□□□□□ -1.19
VTS1	YOR359W	SRS2	P12954	1174 aa		7.61	□□□□□ -1.19
VTS1	YOR359W	RPN12	P32496	274 aa		7.61	□□□□□ -1.19
VTS1	YOR359W	RPC37	P36121	282 aa		7.61	□□□□□ -1.19
VTS1	YOR359W	SUM1	P46676	1062 aa		7.61	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms