RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C VTI1Q04338 217 aa6.76□□□□□ -1.33
LDB19YOR322C BRR1Q99177 341 aaPredicted RBP6.76□□□□□ -1.33
LDB19YOR322C SAC3P46674 1301 aa6.76□□□□□ -1.33
LDB19YOR322C TTI1P36097 1038 aa6.75□□□□□ -1.33
LDB19YOR322C BTN2P53286 410 aa6.75□□□□□ -1.33
LDB19YOR322C NSE3Q05541 303 aa6.75□□□□□ -1.33
LDB19YOR322C RKM4Q12504 494 aa6.75□□□□□ -1.33
LDB19YOR322C GEA2P39993 1459 aaKnown RBP6.75□□□□□ -1.33
LDB19YOR322C SIT4P20604 311 aa6.75□□□□□ -1.33
LDB19YOR322C SWI3P32591 825 aa6.75□□□□□ -1.33
LDB19YOR322C NIP100P33420 868 aa6.75□□□□□ -1.33
LDB19YOR322C YLF2P38746 405 aa6.75□□□□□ -1.33
LDB19YOR322C HEH2Q03281 663 aa6.75□□□□□ -1.33
LDB19YOR322C YPR097WQ06839 1073 aa6.75□□□□□ -1.33
LDB19YOR322C PSO2P30620 661 aa6.74□□□□□ -1.33
LDB19YOR322C ANP1P32629 500 aa6.74□□□□□ -1.33
LDB19YOR322C MED8P38304 223 aa6.74□□□□□ -1.33
LDB19YOR322C CCM1P48237 864 aaPredicted RBP6.74□□□□□ -1.33
LDB19YOR322C PMT7Q06644 662 aa6.74□□□□□ -1.33
LDB19YOR322C CLP1Q08685 445 aaPredicted RBP6.74□□□□□ -1.33
LDB19YOR322C SLP1Q12232 587 aa6.74□□□□□ -1.33
LDB19YOR322C TSR4P25040 408 aa6.74□□□□□ -1.33
LDB19YOR322C YKR023WP36119 530 aaKnown RBP6.74□□□□□ -1.33
LDB19YOR322C MET1P36150 593 aa6.74□□□□□ -1.33
LDB19YOR322C VPS41P38959 992 aa6.74□□□□□ -1.33
LDB19YOR322C SWD1P39706 426 aa6.74□□□□□ -1.33
LDB19YOR322C CWH41P53008 833 aa6.74□□□□□ -1.33
LDB19YOR322C RNH70P53331 553 aa6.74□□□□□ -1.33
LDB19YOR322C VPS20Q04272 221 aa6.74□□□□□ -1.33
LDB19YOR322C SGS1P35187 1447 aa6.73□□□□□ -1.33
LDB19YOR322C FUI1P38196 639 aa6.73□□□□□ -1.33
LDB19YOR322C RIC1P40395 1056 aa6.73□□□□□ -1.33
LDB19YOR322C PEX21P50091 288 aa6.73□□□□□ -1.33
LDB19YOR322C ARV1Q06541 321 aa6.73□□□□□ -1.33
LDB19YOR322C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
LDB19YOR322C GLO3P38682 493 aaKnown RBP6.73□□□□□ -1.33
LDB19YOR322C MRD1Q06106 887 aaKnown RBP6.73□□□□□ -1.33
LDB19YOR322C PCL8Q08966 492 aa6.73□□□□□ -1.33
LDB19YOR322C LSO1Q3E827 93 aa6.73□□□□□ -1.33
LDB19YOR322C PRI1P10363 409 aa6.72□□□□□ -1.33
LDB19YOR322C VMA1P17255 1071 aaKnown RBP6.72□□□□□ -1.33
LDB19YOR322C CIC1P38779 376 aaKnown RBP6.72□□□□□ -1.33
LDB19YOR322C GCD10P41814 478 aa6.72□□□□□ -1.33
LDB19YOR322C RPO31P04051 1460 aa6.72□□□□□ -1.33
LDB19YOR322C SSB1P11484 613 aaKnown RBP6.72□□□□□ -1.33
LDB19YOR322C ZUO1P32527 433 aaKnown RBP6.72□□□□□ -1.33
LDB19YOR322C GRX4P32642 244 aa6.72□□□□□ -1.33
LDB19YOR322C RPC37P36121 282 aa6.72□□□□□ -1.33
LDB19YOR322C TAF5P38129 798 aa6.72□□□□□ -1.33
LDB19YOR322C MEF2P39677 819 aa6.72□□□□□ -1.33
LDB19YOR322C ECM1P39715 212 aa6.72□□□□□ -1.33
LDB19YOR322C SSB2P40150 613 aaKnown RBP6.72□□□□□ -1.33
LDB19YOR322C SEC26P41810 973 aaKnown RBP6.72□□□□□ -1.33
LDB19YOR322C YDR338CQ05497 695 aa6.72□□□□□ -1.33
LDB19YOR322C ORM2Q06144 216 aa6.72□□□□□ -1.33
LDB19YOR322C YIL002W-AQ3E7Z5 69 aa6.72□□□□□ -1.33
LDB19YOR322C KAR1P11927 433 aa6.71□□□□□ -1.33
LDB19YOR322C SRP54P20424 541 aaKnown RBP6.71□□□□□ -1.33
LDB19YOR322C APN1P22936 367 aa6.71□□□□□ -1.33
LDB19YOR322C MRPL25P23369 157 aa6.71□□□□□ -1.33
LDB19YOR322C NUF2P33895 451 aa6.71□□□□□ -1.33
LDB19YOR322C KEL2P50090 882 aa6.71□□□□□ -1.33
LDB19YOR322C RSC1P53236 928 aa6.71□□□□□ -1.33
LDB19YOR322C RNH1Q04740 348 aa6.71□□□□□ -1.33
LDB19YOR322C YDL073WQ07454 984 aa6.71□□□□□ -1.33
LDB19YOR322C MRE11P32829 692 aa6.71□□□□□ -1.34
LDB19YOR322C DLD1P32891 587 aa6.71□□□□□ -1.34
LDB19YOR322C STM1P39015 273 aaKnown RBP6.71□□□□□ -1.34
LDB19YOR322C BUD27P43573 796 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
LDB19YOR322C KAR3P17119 729 aa6.7□□□□□ -1.34
LDB19YOR322C FAR1P21268 830 aa6.7□□□□□ -1.34
LDB19YOR322C UBP12P39538 1254 aa6.7□□□□□ -1.34
LDB19YOR322C CSR1Q06705 408 aaKnown RBP6.7□□□□□ -1.34
LDB19YOR322C DPH6Q12429 685 aa6.7□□□□□ -1.34
LDB19YOR322C RPN12P32496 274 aa6.69□□□□□ -1.34
LDB19YOR322C VPS24P36095 224 aaKnown RBP6.69□□□□□ -1.34
LDB19YOR322C MDM38Q08179 573 aa6.69□□□□□ -1.34
LDB19YOR322C SWI6P09959 803 aa6.69□□□□□ -1.34
LDB19YOR322C KIN1P13185 1064 aa6.69□□□□□ -1.34
LDB19YOR322C RPG1P38249 964 aaKnown RBP6.69□□□□□ -1.34
LDB19YOR322C YER034WP40022 185 aaKnown RBP6.69□□□□□ -1.34
LDB19YOR322C RTT106P40161 455 aa6.69□□□□□ -1.34
LDB19YOR322C IRR1P40541 1150 aa6.69□□□□□ -1.34
LDB19YOR322C YPP1P46951 817 aa6.69□□□□□ -1.34
LDB19YOR322C HOP2P53187 214 aa6.69□□□□□ -1.34
LDB19YOR322C RPN4Q03465 531 aa6.69□□□□□ -1.34
LDB19YOR322C ELM1P32801 640 aa6.68□□□□□ -1.34
LDB19YOR322C ETP1P38748 585 aaKnown RBP6.68□□□□□ -1.34
LDB19YOR322C ILV3P39522 585 aaKnown RBP6.68□□□□□ -1.34
LDB19YOR322C YNL050CP53952 270 aa6.68□□□□□ -1.34
LDB19YOR322C MTC5Q03897 1148 aa6.68□□□□□ -1.34
LDB19YOR322C ARR2Q06597 130 aa6.68□□□□□ -1.34
LDB19YOR322C RRP36Q12481 300 aaPredicted RBP6.68□□□□□ -1.34
LDB19YOR322C KRR1P25586 316 aaPredicted RBP6.68□□□□□ -1.34
LDB19YOR322C BUD2P33314 1104 aa6.68□□□□□ -1.34
LDB19YOR322C YTA6P40328 754 aa6.68□□□□□ -1.34
LDB19YOR322C YPL191CQ08930 360 aa6.68□□□□□ -1.34
LDB19YOR322C YBL111CQ3E7Y5 667 aa6.68□□□□□ -1.34
LDB19YOR322C KIP2P28743 706 aa6.67□□□□□ -1.34
LDB19YOR322C HEM3P28789 327 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms