RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	CSR2	Q12734	1121 aa		2	□□□□□ -2.09
SSK2	YNR031C	TOR2	P32600	2474 aa	Known RBP	2	□□□□□ -2.09
SSK2	YNR031C	VID30	P53076	958 aa		2	□□□□□ -2.09
SSK2	YNR031C	ORC1	P54784	914 aa	Predicted RBP	2	□□□□□ -2.09
SSK2	YNR031C	COB	P00163	385 aa		2	□□□□□ -2.09
SSK2	YNR031C	IFH1	P39520	1085 aa		2	□□□□□ -2.09
SSK2	YNR031C	KRE5	P22023	1365 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	MOT1	P32333	1867 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	RBA50	Q04418	439 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	AIM7	Q12156	149 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	TOP1	P04786	769 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	AFG2	P32794	780 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	ENP1	P38333	483 aa	Known RBP	1.99	□□□□□ -2.09
SSK2	YNR031C	HGH1	P48362	394 aa	Known RBP	1.99	□□□□□ -2.09
SSK2	YNR031C	ULP1	Q02724	621 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	YDR034W-B	Q6Q5X2	51 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	PAF1	P38351	445 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	TCB1	Q12466	1186 aa		1.99	□□□□□ -2.09
SSK2	YNR031C	ECM29	P38737	1868 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	YKL133C	P36066	463 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	1.98	□□□□□ -2.09	not detected
SSK2	YNR031C	YLR225C	Q05948	407 aa	Known RBP	1.98	□□□□□ -2.09
SSK2	YNR031C	IXR1	P33417	597 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	CHZ1	P40019	153 aa	Predicted RBP	1.98	□□□□□ -2.09
SSK2	YNR031C	RAD4	P14736	754 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	MSM1	P22438	575 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	YPL034W	Q03083	165 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	TAP42	Q04372	366 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	SGD1	Q06132	899 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	VPS62	P53285	467 aa		1.98	□□□□□ -2.09
SSK2	YNR031C	PFF1	P38244	976 aa		1.97	□□□□□ -2.09
SSK2	YNR031C	PSF2	P40359	213 aa		1.97	□□□□□ -2.09
SSK2	YNR031C	NPL4	P33755	580 aa		1.97	□□□□□ -2.09
SSK2	YNR031C	CTF4	Q01454	927 aa		1.97	□□□□□ -2.09
SSK2	YNR031C	GCN1	P33892	2672 aa	Known RBP	1.97	□□□□□ -2.09
SSK2	YNR031C	SLX5	P32828	619 aa	Known RBP	1.97	□□□□□ -2.09
SSK2	YNR031C	CKB1	P43639	278 aa		1.97	□□□□□ -2.09
SSK2	YNR031C	YRB30	P53107	440 aa	Predicted RBP	1.97	□□□□□ -2.09
SSK2	YNR031C	CAN1	P04817	590 aa		1.96	□□□□□ -2.09
SSK2	YNR031C	EMP47	P43555	445 aa		1.96	□□□□□ -2.09
SSK2	YNR031C	YPR148C	Q06523	435 aa		1.96	□□□□□ -2.09
SSK2	YNR031C	YMR206W	Q03695	313 aa		1.96	□□□□□ -2.1
SSK2	YNR031C	NOP2	P40991	618 aa	Known RBP	1.96	□□□□□ -2.1
SSK2	YNR031C	RLP24	Q07915	199 aa	Known RBP	1.96	□□□□□ -2.1
SSK2	YNR031C	BUD21	Q08492	214 aa	Predicted RBP	1.96	□□□□□ -2.1
SSK2	YNR031C	GRX6	Q12438	231 aa		1.96	□□□□□ -2.1
SSK2	YNR031C	FAB1	P34756	2278 aa		1.96	□□□□□ -2.1
SSK2	YNR031C	TGL3	P40308	642 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	EPS1	P40557	701 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	FET4	P40988	552 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	RAD59	Q12223	238 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	HXT5	P38695	592 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	ALD4	P46367	519 aa	Known RBP	1.95	□□□□□ -2.1
SSK2	YNR031C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	1.95	□□□□□ -2.1	not detected
SSK2	YNR031C	SPR3	P41901	512 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	DMA1	P38823	416 aa		1.95	□□□□□ -2.1
SSK2	YNR031C	MCM6	P53091	1017 aa	Known RBP	1.95	□□□□□ -2.1
SSK2	YNR031C	SAC3	P46674	1301 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	TEL1	P38110	2787 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	YKU70	P32807	602 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	LEO1	P38439	464 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	RPP1A	P05318	106 aa	Predicted RBP	1.94	□□□□□ -2.1
SSK2	YNR031C	RDH54	P38086	958 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	SET1	P38827	1080 aa	Known RBP	1.94	□□□□□ -2.1
SSK2	YNR031C	OYE3	P41816	400 aa	Predicted RBP	1.94	□□□□□ -2.1
SSK2	YNR031C	RPS0B	P46654	252 aa	Known RBP	1.94	□□□□□ -2.1
SSK2	YNR031C	YBL029C-A	Q3E756	94 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	PRP8	P33334	2413 aa	Known RBP	1.94	□□□□□ -2.1
SSK2	YNR031C	DSF2	P38213	736 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	MEC3	Q02574	474 aa		1.94	□□□□□ -2.1
SSK2	YNR031C	MCM3	P24279	971 aa	Known RBP	1.93	□□□□□ -2.1
SSK2	YNR031C	FAA3	P39002	694 aa		1.93	□□□□□ -2.1
SSK2	YNR031C	YPR084W	Q06821	456 aa		1.93	□□□□□ -2.1
SSK2	YNR031C	MAM3	Q12296	706 aa		1.93	□□□□□ -2.1
SSK2	YNR031C	NUP145	P49687	1317 aa		1.93	□□□□□ -2.1
SSK2	YNR031C	POL5	P39985	1022 aa	Known RBP	1.93	□□□□□ -2.1
SSK2	YNR031C	ATG36	P46983	293 aa		1.93	□□□□□ -2.1
SSK2	YNR031C	ERO1	Q03103	563 aa		1.93	□□□□□ -2.1
SSK2	YNR031C	UBR2	Q07963	1872 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	ENV11	P53246	860 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	LAA1	P39526	2014 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	CPS1	P27614	576 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	GRE2	Q12068	342 aa	Known RBP	1.92	□□□□□ -2.1
SSK2	YNR031C	TUS1	Q06412	1307 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	JIP4	Q03361	876 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	FLO11	P08640	1367 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	IRE1	P32361	1115 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	AIM21	P40563	679 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	MSB3	P48566	633 aa	Predicted RBP	1.92	□□□□□ -2.1
SSK2	YNR031C	MFB1	Q04922	465 aa		1.92	□□□□□ -2.1
SSK2	YNR031C	MST1	P07236	462 aa		1.91	□□□□□ -2.1
SSK2	YNR031C	ICL1	P28240	557 aa	Predicted RBP	1.91	□□□□□ -2.1
SSK2	YNR031C	TIF4632	P39936	914 aa	Known RBP	1.91	□□□□□ -2.1
SSK2	YNR031C	NST1	P53935	1240 aa		1.91	□□□□□ -2.1
SSK2	YNR031C	PEX2	P32800	271 aa		1.91	□□□□□ -2.1
SSK2	YNR031C	ASH1	P34233	588 aa		1.91	□□□□□ -2.1
SSK2	YNR031C	SNU71	P53207	620 aa	Known RBP	1.91	□□□□□ -2.1
SSK2	YNR031C	IRC3	Q06683	689 aa		1.91	□□□□□ -2.1
SSK2	YNR031C	YGR117C	P53270	476 aa		1.91	□□□□□ -2.1
SSK2	YNR031C	YGR130C	P53278	816 aa		1.91	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms