RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C CST6P40535 587 aa7.91□□□□□ -1.14
SCS7YMR272C NOP2P40991 618 aaKnown RBP7.91□□□□□ -1.14
SCS7YMR272C RRP46P53256 223 aaPredicted RBP7.91□□□□□ -1.14
SCS7YMR272C COQ4O13525 335 aa7.9□□□□□ -1.14
SCS7YMR272C YBR287WP38355 427 aa7.9□□□□□ -1.14
SCS7YMR272C THS1P04801 734 aaKnown RBP7.89□□□□□ -1.15
SCS7YMR272C RPP0P05317 312 aaKnown RBP7.89□□□□□ -1.15
SCS7YMR272C ARG8P18544 423 aa7.89□□□□□ -1.15
SCS7YMR272C APL2P36000 726 aaPredicted RBP7.89□□□□□ -1.15
SCS7YMR272C YDL144CQ07589 356 aa7.89□□□□□ -1.15
SCS7YMR272C YPR204WQ08995 1032 aa7.89□□□□□ -1.15
SCS7YMR272C AIM7Q12156 149 aa7.89□□□□□ -1.15
SCS7YMR272C MAK21Q12176 1025 aaKnown RBP7.89□□□□□ -1.15
SCS7YMR272C TIM50Q02776 476 aa7.88□□□□□ -1.15
SCS7YMR272C DPH6Q12429 685 aa7.88□□□□□ -1.15
SCS7YMR272C GLC3P32775 704 aa7.87□□□□□ -1.15
SCS7YMR272C MPP10P47083 593 aaKnown RBP7.87□□□□□ -1.15
SCS7YMR272C SEN54Q02825 467 aaPredicted RBP7.87□□□□□ -1.15
SCS7YMR272C DPL1Q05567 589 aa7.87□□□□□ -1.15
SCS7YMR272C PSF3Q12146 194 aa7.87□□□□□ -1.15
SCS7YMR272C TPD3P31383 635 aa7.86□□□□□ -1.15
SCS7YMR272C MRP7P12687 371 aa7.85□□□□□ -1.15
SCS7YMR272C UBP16Q02863 499 aa7.85□□□□□ -1.15
SCS7YMR272C THI22Q06490 572 aa7.85□□□□□ -1.15
SCS7YMR272C CAF20P12962 161 aaKnown RBP7.84□□□□□ -1.15
SCS7YMR272C NUP133P36161 1157 aa7.84□□□□□ -1.15
SCS7YMR272C NUG1P40010 520 aaKnown RBP7.84□□□□□ -1.15
SCS7YMR272C VHR2P40041 505 aa7.84□□□□□ -1.15
SCS7YMR272C YJR008WP47085 338 aa7.84□□□□□ -1.15
SCS7YMR272C ZDS2P54786 942 aa7.84□□□□□ -1.15
SCS7YMR272C SRT1Q03175 343 aa7.84□□□□□ -1.15
SCS7YMR272C RTT109Q07794 436 aa7.84□□□□□ -1.15
SCS7YMR272C RRG1Q12167 365 aaPredicted RBP7.84□□□□□ -1.15
SCS7YMR272C DIP2Q12220 943 aaPredicted RBP7.84□□□□□ -1.15
SCS7YMR272C SNU66Q12420 587 aaPredicted RBP7.84□□□□□ -1.15
SCS7YMR272C VPS27P40343 622 aaKnown RBP7.83□□□□□ -1.16
SCS7YMR272C PSH1Q12161 406 aa7.83□□□□□ -1.16
SCS7YMR272C DCD1P06773 312 aa7.82□□□□□ -1.16
SCS7YMR272C FAS2P19097 1887 aaKnown RBP7.82□□□□□ -1.16
SCS7YMR272C PEA2P40091 420 aa7.82□□□□□ -1.16
SCS7YMR272C YRB30P53107 440 aaPredicted RBP7.82□□□□□ -1.16
SCS7YMR272C SRC1Q03707 834 aa7.82□□□□□ -1.16
SCS7YMR272C CWC15Q03772 175 aaKnown RBP7.82□□□□□ -1.16
SCS7YMR272C MTC5Q03897 1148 aa7.82□□□□□ -1.16
SCS7YMR272C SAC3P46674 1301 aa7.81□□□□□ -1.16
SCS7YMR272C KRE2P27809 442 aa7.81□□□□□ -1.16
SCS7YMR272C FET4P40988 552 aa7.81□□□□□ -1.16
SCS7YMR272C ITC1P53125 1264 aa7.81□□□□□ -1.16
SCS7YMR272C TRM44Q02648 567 aaKnown RBP7.81□□□□□ -1.16
SCS7YMR272C CDC45Q08032 650 aa7.81□□□□□ -1.16
SCS7YMR272C PMD1P32634 1753 aa7.81□□□□□ -1.16
SCS7YMR272C YLR278CQ05854 1341 aa7.8□□□□□ -1.16
SCS7YMR272C BSD2P38356 321 aa7.8□□□□□ -1.16
SCS7YMR272C ICP55P40051 511 aa7.8□□□□□ -1.16
SCS7YMR272C EMP47P43555 445 aa7.8□□□□□ -1.16
SCS7YMR272C ACK1Q07622 623 aaPredicted RBP7.8□□□□□ -1.16
SCS7YMR272C TYW1Q08960 810 aaKnown RBP7.8□□□□□ -1.16
SCS7YMR272C DAL5P15365 543 aa7.79□□□□□ -1.16
SCS7YMR272C RSC30P38781 883 aa7.79□□□□□ -1.16
SCS7YMR272C SET1P38827 1080 aaKnown RBP7.79□□□□□ -1.16
SCS7YMR272C RRT6P53117 311 aaPredicted RBP7.79□□□□□ -1.16
SCS7YMR272C YGR117CP53270 476 aa7.79□□□□□ -1.16
SCS7YMR272C YDR306CQ06640 478 aa7.79□□□□□ -1.16
SCS7YMR272C SWI1P09547 1314 aa7.78□□□□□ -1.16
SCS7YMR272C JJJ2P46997 583 aa7.78□□□□□ -1.16
SCS7YMR272C PRP42Q03776 544 aaKnown RBP7.78□□□□□ -1.16
SCS7YMR272C AFG2P32794 780 aa7.77□□□□□ -1.17
SCS7YMR272C NGR1P32831 672 aaKnown RBP7.77□□□□□ -1.17
SCS7YMR272C TFA1P36100 482 aa7.77□□□□□ -1.17
SCS7YMR272C YPP1P46951 817 aa7.77□□□□□ -1.17
SCS7YMR272C HEF3P53978 1044 aaKnown RBP7.77□□□□□ -1.17
SCS7YMR272C AAD16Q02895 342 aa7.77□□□□□ -1.17
SCS7YMR272C TIF6Q12522 245 aaKnown RBP7.77□□□□□ -1.17
SCS7YMR272C HKR1P41809 1802 aa7.76□□□□□ -1.17
SCS7YMR272C GAL2P13181 574 aa7.76□□□□□ -1.17
SCS7YMR272C HPR1P17629 752 aaKnown RBP7.76□□□□□ -1.17
SCS7YMR272C MGM1P32266 881 aa7.76□□□□□ -1.17
SCS7YMR272C UBP12P39538 1254 aa7.76□□□□□ -1.17
SCS7YMR272C TRP5P00931 707 aaKnown RBP7.75□□□□□ -1.17
SCS7YMR272C SSF1P38789 453 aaPredicted RBP7.75□□□□□ -1.17
SCS7YMR272C YIL089WP40500 205 aa7.75□□□□□ -1.17
SCS7YMR272C HGH1P48362 394 aaKnown RBP7.75□□□□□ -1.17
SCS7YMR272C DUS1P53759 423 aaKnown RBP7.75□□□□□ -1.17
SCS7YMR272C FCP1Q03254 732 aa7.75□□□□□ -1.17
SCS7YMR272C THI3Q07471 609 aa7.75□□□□□ -1.17
SCS7YMR272C SRF1Q12516 437 aa7.75□□□□□ -1.17
SCS7YMR272C RPT4P53549 437 aaKnown RBP7.74□□□□□ -1.17
SCS7YMR272C PIF1P07271 859 aa7.72□□□□□ -1.17
SCS7YMR272C RAD2P07276 1031 aa7.72□□□□□ -1.17
SCS7YMR272C GSM1P42950 618 aa7.72□□□□□ -1.17
SCS7YMR272C NCB2Q92317 146 aa7.72□□□□□ -1.17
SCS7YMR272C ETP1P38748 585 aaKnown RBP7.71□□□□□ -1.18
SCS7YMR272C VPS4P52917 437 aa7.71□□□□□ -1.18
SCS7YMR272C RRI2Q12348 645 aa7.71□□□□□ -1.18
SCS7YMR272C ARG82P07250 355 aa7.7□□□□□ -1.18
SCS7YMR272C CBP1P07252 654 aa7.7□□□□□ -1.18
SCS7YMR272C RPS19AP07280 144 aaKnown RBP7.7□□□□□ -1.18
SCS7YMR272C RPS19BP07281 144 aaPredicted RBP7.7□□□□□ -1.18
SCS7YMR272C NIT1P40447 199 aa7.7□□□□□ -1.18
SCS7YMR272C WRS1Q12109 432 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms