RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C DAT1P13483 248 aaKnown RBP8.11□□□□□ -1.11
CTF18YMR078C SLD2P34252 453 aa8.11□□□□□ -1.11
CTF18YMR078C MDJ2P42834 146 aa8.11□□□□□ -1.11
CTF18YMR078C BDS1Q08347 646 aa8.1□□□□□ -1.11
CTF18YMR078C YPQ2Q06328 317 aa8.1□□□□□ -1.11
CTF18YMR078C BOI1P38041 980 aaKnown RBP8.08□□□□□ -1.12
CTF18YMR078C TBS1P38114 1094 aa8.08□□□□□ -1.12
CTF18YMR078C IPL1P38991 367 aa8.08□□□□□ -1.12
CTF18YMR078C ATG1P53104 897 aa8.08□□□□□ -1.12
CTF18YMR078C CAB1Q04430 367 aa8.08□□□□□ -1.12
CTF18YMR078C UTP7P40055 554 aaKnown RBP8.07□□□□□ -1.12
CTF18YMR078C FUR4P05316 633 aaKnown RBP8.06□□□□□ -1.12
CTF18YMR078C CDC4P07834 779 aa8.06□□□□□ -1.12
CTF18YMR078C GRS1P38088 690 aaKnown RBP8.06□□□□□ -1.12
CTF18YMR078C YBR197CP38306 217 aa8.06□□□□□ -1.12
CTF18YMR078C STM1P39015 273 aaKnown RBP8.06□□□□□ -1.12
CTF18YMR078C HXT5P38695 592 aa8.05□□□□□ -1.12
CTF18YMR078C QDR1P40475 563 aa8.05□□□□□ -1.12
CTF18YMR078C SUM1P46676 1062 aa8.05□□□□□ -1.12
CTF18YMR078C LSO1Q3E827 93 aa8.05□□□□□ -1.12
CTF18YMR078C AFT1P22149 690 aa8.04□□□□□ -1.12
CTF18YMR078C YHL050CP38721 697 aa8.04□□□□□ -1.12
CTF18YMR078C YHR219WP38900 624 aa8.04□□□□□ -1.12
CTF18YMR078C MSB3P48566 633 aaPredicted RBP8.04□□□□□ -1.12
CTF18YMR078C GLO3P38682 493 aaKnown RBP8.03□□□□□ -1.12
CTF18YMR078C RTT106P40161 455 aa8.03□□□□□ -1.12
CTF18YMR078C CWH41P53008 833 aa8.03□□□□□ -1.12
CTF18YMR078C MSC6Q08818 692 aaKnown RBP8.03□□□□□ -1.12
CTF18YMR078C ASH1P34233 588 aa8.03□□□□□ -1.12
CTF18YMR078C RPP2BP02400 110 aaKnown RBP8.02□□□□□ -1.13
CTF18YMR078C DPS1P04802 557 aaKnown RBP8.02□□□□□ -1.13
CTF18YMR078C MCM1P11746 286 aa8.02□□□□□ -1.13
CTF18YMR078C ISC10P32645 267 aa8.02□□□□□ -1.13
CTF18YMR078C FOX2Q02207 900 aaKnown RBP8.02□□□□□ -1.13
CTF18YMR078C FRT1Q99332 602 aa8.02□□□□□ -1.13
CTF18YMR078C UGA3P26370 528 aa8.01□□□□□ -1.13
CTF18YMR078C HEM3P28789 327 aa8.01□□□□□ -1.13
CTF18YMR078C RRN6P32786 894 aa8.01□□□□□ -1.13
CTF18YMR078C KTR2P33550 425 aa8.01□□□□□ -1.13
CTF18YMR078C DLD3P39976 496 aaKnown RBP8.01□□□□□ -1.13
CTF18YMR078C WHI5Q12416 295 aa8.01□□□□□ -1.13
CTF18YMR078C AAD14P42884 376 aa8□□□□□ -1.13
CTF18YMR078C ACF4P47129 309 aa8□□□□□ -1.13
CTF18YMR078C SSN3P39073 555 aa7.99□□□□□ -1.13
CTF18YMR078C YNL165WP53891 406 aa7.99□□□□□ -1.13
CTF18YMR078C NUT2Q06213 157 aa7.99□□□□□ -1.13
CTF18YMR078C APC11Q12157 165 aa7.99□□□□□ -1.13
CTF18YMR078C SEC20P28791 383 aa7.98□□□□□ -1.13
CTF18YMR078C HST3P53687 447 aa7.98□□□□□ -1.13
CTF18YMR078C RPB10P22139 70 aa7.97□□□□□ -1.13
CTF18YMR078C PPX1P38698 397 aa7.97□□□□□ -1.13
CTF18YMR078C MRPL33P20084 86 aa7.96□□□□□ -1.14
CTF18YMR078C PTK2P47116 818 aaKnown RBP7.95□□□□□ -1.14
CTF18YMR078C ARG82P07250 355 aa7.95□□□□□ -1.14
CTF18YMR078C SHM1P37292 490 aaPredicted RBP7.95□□□□□ -1.14
CTF18YMR078C YJR115WP47152 169 aa7.95□□□□□ -1.14
CTF18YMR078C RRP15Q06511 250 aaPredicted RBP7.95□□□□□ -1.14
CTF18YMR078C RPS31P05759 152 aaKnown RBP7.94□□□□□ -1.14
CTF18YMR078C SCD5P34758 872 aa7.94□□□□□ -1.14
CTF18YMR078C DLD1P32891 587 aa7.94□□□□□ -1.14
CTF18YMR078C MSN5P52918 1224 aa7.93□□□□□ -1.14
CTF18YMR078C TY1A-DR3Q12441 440 aa7.93□□□□□ -1.14
CTF18YMR078C Q0182Q9ZZW1 134 aa7.93□□□□□ -1.14
CTF18YMR078C ATE1P16639 503 aa7.93□□□□□ -1.14
CTF18YMR078C JJJ2P46997 583 aa7.93□□□□□ -1.14
CTF18YMR078C GPI13Q07830 1017 aa7.93□□□□□ -1.14
CTF18YMR078C MLF3P32047 452 aa7.92□□□□□ -1.14
CTF18YMR078C SLA1P32790 1244 aa7.92□□□□□ -1.14
CTF18YMR078C MNL2Q12205 849 aa7.92□□□□□ -1.14
CTF18YMR078C MET4P32389 672 aa7.91□□□□□ -1.14
CTF18YMR078C TRS120Q04183 1289 aa7.91□□□□□ -1.14
CTF18YMR078C VMA3P25515 160 aa7.91□□□□□ -1.14
CTF18YMR078C ALA1P40825 983 aaKnown RBP7.91□□□□□ -1.14
CTF18YMR078C UTP4Q06679 776 aaKnown RBP7.91□□□□□ -1.14
CTF18YMR078C SPR3P41901 512 aa7.9□□□□□ -1.14
CTF18YMR078C ALD2P47771 506 aa7.9□□□□□ -1.15
CTF18YMR078C SRC1Q03707 834 aa7.89□□□□□ -1.15
CTF18YMR078C YJR098CP47139 656 aa7.88□□□□□ -1.15
CTF18YMR078C SUT1P53032 299 aaKnown RBP7.88□□□□□ -1.15
CTF18YMR078C DAL1P32375 460 aa7.88□□□□□ -1.15
CTF18YMR078C THI12P42883 340 aa7.87□□□□□ -1.15
CTF18YMR078C THI5P43534 340 aa7.87□□□□□ -1.15
CTF18YMR078C VTC4P47075 721 aa7.87□□□□□ -1.15
CTF18YMR078C POL32P47110 350 aa7.87□□□□□ -1.15
CTF18YMR078C THI11P47183 340 aa7.87□□□□□ -1.15
CTF18YMR078C THI13Q07748 340 aa7.87□□□□□ -1.15
CTF18YMR078C NUP85P46673 744 aa7.87□□□□□ -1.15
CTF18YMR078C SRF1Q12516 437 aa7.87□□□□□ -1.15
CTF18YMR078C IRE1P32361 1115 aa7.86□□□□□ -1.15
CTF18YMR078C QDR2P40474 542 aa7.86□□□□□ -1.15
CTF18YMR078C UFD2P54860 961 aa7.84□□□□□ -1.15
CTF18YMR078C PSH1Q12161 406 aa7.84□□□□□ -1.15
CTF18YMR078C TRK1P12685 1235 aa7.84□□□□□ -1.15
CTF18YMR078C PAM1P37304 830 aaKnown RBP7.84□□□□□ -1.15
CTF18YMR078C HXT8P40886 569 aa7.84□□□□□ -1.15
CTF18YMR078C SNU71P53207 620 aaKnown RBP7.84□□□□□ -1.15
CTF18YMR078C PDC6P26263 563 aaKnown RBP7.83□□□□□ -1.16
CTF18YMR078C ASF1P32447 279 aa7.83□□□□□ -1.16
CTF18YMR078C STB3Q12427 513 aa7.83□□□□□ -1.16
CTF18YMR078C NAB2P32505 525 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms