RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C NYV1Q12255 253 aa11.06□□□□□ -0.64
SEC61YLR378C BUD31P25337 157 aaPredicted RBP11.05□□□□□ -0.64
SEC61YLR378C SSF1P38789 453 aaPredicted RBP11.05□□□□□ -0.64
SEC61YLR378C BDP1P46678 594 aa11.05□□□□□ -0.64
SEC61YLR378C PSH1Q12161 406 aa11.05□□□□□ -0.64
SEC61YLR378C ITC1P53125 1264 aa11.04□□□□□ -0.64
SEC61YLR378C RAD50P12753 1312 aa11.03□□□□□ -0.64
SEC61YLR378C DCD1P06773 312 aa11.02□□□□□ -0.64
SEC61YLR378C UTP10P42945 1769 aaKnown RBP11.02□□□□□ -0.65
SEC61YLR378C BDF1P35817 686 aa11.01□□□□□ -0.65
SEC61YLR378C LYS4P49367 693 aaPredicted RBP11.01□□□□□ -0.65
SEC61YLR378C CDC16P09798 840 aa11.01□□□□□ -0.65
SEC61YLR378C MTC5Q03897 1148 aa11.01□□□□□ -0.65
SEC61YLR378C YIR014WP40570 242 aa11□□□□□ -0.65
SEC61YLR378C UTP22P53254 1237 aaPredicted RBP11□□□□□ -0.65
SEC61YLR378C FCP1Q03254 732 aa11□□□□□ -0.65
SEC61YLR378C HAT1Q12341 374 aa11□□□□□ -0.65
SEC61YLR378C SNU66Q12420 587 aaPredicted RBP11□□□□□ -0.65
SEC61YLR378C ALD2P47771 506 aa10.99□□□□□ -0.65
SEC61YLR378C RAT1Q02792 1006 aaKnown RBP10.99□□□□□ -0.65
SEC61YLR378C ALD3P54114 506 aa10.98□□□□□ -0.65
SEC61YLR378C SSK22P25390 1331 aaPredicted RBP10.97□□□□□ -0.65
SEC61YLR378C PDR18P53756 1333 aa10.97□□□□□ -0.65
SEC61YLR378C VAS1P07806 1104 aaKnown RBP10.96□□□□□ -0.65
SEC61YLR378C PRI1P10363 409 aa10.96□□□□□ -0.65
SEC61YLR378C RPG1P38249 964 aaKnown RBP10.96□□□□□ -0.65
SEC61YLR378C GTT3P39996 337 aa10.96□□□□□ -0.65
SEC61YLR378C MLC1P53141 149 aa10.96□□□□□ -0.65
SEC61YLR378C DIB1Q06819 143 aaPredicted RBP10.96□□□□□ -0.65
SEC61YLR378C SAC3P46674 1301 aa10.94□□□□□ -0.66
SEC61YLR378C ECM21P38167 1117 aaKnown RBP10.94□□□□□ -0.66
SEC61YLR378C HXT10P43581 546 aa10.94□□□□□ -0.66
SEC61YLR378C HPC2Q01448 625 aa10.94□□□□□ -0.66
SEC61YLR378C GCR2Q01722 534 aa10.94□□□□□ -0.66
SEC61YLR378C CTI6Q08923 506 aa10.94□□□□□ -0.66
SEC61YLR378C NOT3P06102 836 aaKnown RBP10.93□□□□□ -0.66
SEC61YLR378C YGL242CP53066 181 aa10.93□□□□□ -0.66
SEC61YLR378C GYP5Q12344 894 aa10.93□□□□□ -0.66
SEC61YLR378C DLD1P32891 587 aa10.92□□□□□ -0.66
SEC61YLR378C UGA2P38067 497 aa10.92□□□□□ -0.66
SEC61YLR378C BRE1Q07457 700 aaKnown RBP10.92□□□□□ -0.66
SEC61YLR378C BRN1P38170 754 aa10.92□□□□□ -0.66
SEC61YLR378C YBL086CP38177 466 aa10.92□□□□□ -0.66
SEC61YLR378C CTH1P47976 325 aa10.92□□□□□ -0.66
SEC61YLR378C SSA2P10592 639 aaKnown RBP10.91□□□□□ -0.66
SEC61YLR378C RMD1Q03441 430 aa10.91□□□□□ -0.66
SEC61YLR378C OPY1P38271 328 aa10.9□□□□□ -0.66
SEC61YLR378C SLA1P32790 1244 aa10.89□□□□□ -0.67
SEC61YLR378C TOS1P38288 455 aa10.89□□□□□ -0.67
SEC61YLR378C FPR4Q06205 392 aaPredicted RBP10.89□□□□□ -0.67
SEC61YLR378C BDF2Q07442 638 aa10.89□□□□□ -0.67
SEC61YLR378C SEC18P18759 758 aaKnown RBP10.88□□□□□ -0.67
SEC61YLR378C ALO1P54783 526 aaKnown RBP10.88□□□□□ -0.67
SEC61YLR378C SYF1Q04048 859 aaPredicted RBP10.87□□□□□ -0.67
SEC61YLR378C RIX7Q07844 837 aaKnown RBP10.87□□□□□ -0.67
SEC61YLR378C UBP16Q02863 499 aa10.86□□□□□ -0.67
SEC61YLR378C SRC1Q03707 834 aa10.86□□□□□ -0.67
SEC61YLR378C RRI2Q12348 645 aa10.86□□□□□ -0.67
SEC61YLR378C RLF2Q12495 606 aa10.86□□□□□ -0.67
SEC61YLR378C ADR1P07248 1323 aa10.86□□□□□ -0.67
SEC61YLR378C KTR1P27810 393 aaKnown RBP10.85□□□□□ -0.67
SEC61YLR378C NGR1P32831 672 aaKnown RBP10.85□□□□□ -0.67
SEC61YLR378C KTR3P38130 404 aaPredicted RBP10.85□□□□□ -0.67
SEC61YLR378C MRPS35P53292 345 aa10.85□□□□□ -0.67
SEC61YLR378C IRC3Q06683 689 aa10.85□□□□□ -0.67
SEC61YLR378C RIM20Q12033 661 aa10.85□□□□□ -0.67
SEC61YLR378C DPH6Q12429 685 aa10.85□□□□□ -0.67
SEC61YLR378C PCT1P13259 424 aa10.84□□□□□ -0.67
SEC61YLR378C HXT13P39924 564 aa10.84□□□□□ -0.67
SEC61YLR378C PIF1P07271 859 aa10.84□□□□□ -0.67
SEC61YLR378C IME2P32581 645 aa10.84□□□□□ -0.67
SEC61YLR378C OSH3P38713 996 aaKnown RBP10.84□□□□□ -0.67
SEC61YLR378C STM1P39015 273 aaKnown RBP10.84□□□□□ -0.67
SEC61YLR378C YNL193WP53870 558 aa10.84□□□□□ -0.67
SEC61YLR378C EAF7P53911 425 aaKnown RBP10.84□□□□□ -0.67
SEC61YLR378C AI2P03876 854 aa10.83□□□□□ -0.68
SEC61YLR378C TPM1P17536 199 aaKnown RBP10.83□□□□□ -0.68
SEC61YLR378C PBY1P38254 753 aa10.83□□□□□ -0.68
SEC61YLR378C NUG1P40010 520 aaKnown RBP10.83□□□□□ -0.68
SEC61YLR378C HXT17P53631 564 aa10.83□□□□□ -0.68
SEC61YLR378C RPN7Q06103 429 aaKnown RBP10.83□□□□□ -0.68
SEC61YLR378C MGM1P32266 881 aa10.82□□□□□ -0.68
SEC61YLR378C THI3Q07471 609 aa10.82□□□□□ -0.68
SEC61YLR378C POM152P39685 1337 aa10.81□□□□□ -0.68
SEC61YLR378C RNR2P09938 399 aaKnown RBP10.81□□□□□ -0.68
SEC61YLR378C FRD1P32614 470 aaKnown RBP10.81□□□□□ -0.68
SEC61YLR378C AAP1P37898 856 aaKnown RBP10.81□□□□□ -0.68
SEC61YLR378C PFF1P38244 976 aa10.81□□□□□ -0.68
SEC61YLR378C RPN1P38764 993 aaKnown RBP10.81□□□□□ -0.68
SEC61YLR378C ICP55P40051 511 aa10.81□□□□□ -0.68
SEC61YLR378C KRI1P42846 591 aaKnown RBP10.81□□□□□ -0.68
SEC61YLR378C SAS4Q04003 481 aa10.81□□□□□ -0.68
SEC61YLR378C SIT4P20604 311 aa10.8□□□□□ -0.68
SEC61YLR378C SRS2P12954 1174 aa10.79□□□□□ -0.68
SEC61YLR378C VPS24P36095 224 aaKnown RBP10.79□□□□□ -0.68
SEC61YLR378C EPS1P40557 701 aa10.78□□□□□ -0.68
SEC61YLR378C ENP2P48234 707 aaKnown RBP10.78□□□□□ -0.68
SEC61YLR378C PIB2P53191 635 aa10.78□□□□□ -0.68
SEC61YLR378C OPI1P21957 404 aa10.77□□□□□ -0.68
SEC61YLR378C HAL5P38970 855 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms