RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	PSO2	P30620	661 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	DPH5	P32469	300 aa	Predicted RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	OLA1	P38219	394 aa	Known RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	RFC1	P38630	861 aa	Known RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	YMR124W	P39523	943 aa	Known RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	PRP31	P49704	494 aa	Predicted RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	YGL081W	P53156	320 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	BNR1	P40450	1375 aa		5.46	□□□□□ -1.53
CLF1	YLR117C	TY1B-A	O13527	1196 aa	Known RBP	5.46	□□□□□ -1.53
CLF1	YLR117C	KEX1	P09620	729 aa		5.46	□□□□□ -1.53
CLF1	YLR117C	MRPL10	P36520	322 aa		5.46	□□□□□ -1.53
CLF1	YLR117C	VID30	P53076	958 aa		5.46	□□□□□ -1.53
CLF1	YLR117C	YGL082W	P53155	381 aa		5.46	□□□□□ -1.53
CLF1	YLR117C	SNU71	P53207	620 aa	Known RBP	5.46	□□□□□ -1.53
CLF1	YLR117C	DNM1	P54861	757 aa		5.46	□□□□□ -1.53
CLF1	YLR117C	YPL225W	Q08971	146 aa	Known RBP	5.46	□□□□□ -1.53
CLF1	YLR117C	PSK1	P31374	1356 aa		5.46	□□□□□ -1.54
CLF1	YLR117C	BNI1	P41832	1953 aa		5.46	□□□□□ -1.54
CLF1	YLR117C	HSP104	P31539	908 aa	Known RBP	5.46	□□□□□ -1.54
CLF1	YLR117C	DSF2	P38213	736 aa		5.46	□□□□□ -1.54
CLF1	YLR117C	IAH1	P41734	238 aa		5.46	□□□□□ -1.54
CLF1	YLR117C	GYL1	Q04322	720 aa		5.46	□□□□□ -1.54
CLF1	YLR117C	TRK1	P12685	1235 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	SAP1	P39955	897 aa	Known RBP	5.45	□□□□□ -1.54
CLF1	YLR117C	PEA2	P40091	420 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	MVP1	P40959	511 aa	Known RBP	5.45	□□□□□ -1.54
CLF1	YLR117C	SAP155	P43612	1002 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	CWH41	P53008	833 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	PUF6	Q04373	656 aa	Known RBP	5.45	□□□□□ -1.54
CLF1	YLR117C	HRQ1	Q05549	1077 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	NFI1	Q12216	726 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	NHA1	Q99271	985 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	YOR093C	Q12275	1648 aa		5.45	□□□□□ -1.54
CLF1	YLR117C	OXP1	P28273	1286 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	HOS4	P40480	1083 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	HYR1	P40581	163 aa	Known RBP	5.44	□□□□□ -1.54
CLF1	YLR117C	APC11	Q12157	165 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	GIN4	Q12263	1142 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	MSB4	Q12317	492 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	RAD50	P12753	1312 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	DID4	P36108	232 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	TPS3	P38426	1054 aa	Known RBP	5.44	□□□□□ -1.54
CLF1	YLR117C	YIL055C	P40523	627 aa	Known RBP	5.44	□□□□□ -1.54
CLF1	YLR117C	VPS20	Q04272	221 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	YOR389W	Q08912	624 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	HIF1	Q12373	385 aa		5.44	□□□□□ -1.54
CLF1	YLR117C	DLD1	P32891	587 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	SIT1	P39980	628 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	SSL2	Q00578	843 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	SSA1	P10591	642 aa	Known RBP	5.43	□□□□□ -1.54
CLF1	YLR117C	SSA2	P10592	639 aa	Known RBP	5.43	□□□□□ -1.54
CLF1	YLR117C	TAF13	P11747	167 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	SLD2	P34252	453 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	TAF5	P38129	798 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	PTP3	P40048	928 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	LEM3	P42838	414 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	UBX2	Q04228	584 aa		5.43	□□□□□ -1.54
CLF1	YLR117C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	RIP-Chip
CLF1	YLR117C	MCM1	P11746	286 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	YEF3	P16521	1044 aa	Known RBP	5.42	□□□□□ -1.54
CLF1	YLR117C	PHO87	P25360	923 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	RAD16	P31244	790 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	RTG3	P38165	486 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	SPO19	Q03029	223 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	HOT1	Q03213	719 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	AOS1	Q06624	347 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	YRF1-4	O13559	1382 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	YML133C	Q03099	1374 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	YLL067C	Q07888	1374 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	YLL066C	Q99208	1374 aa		5.42	□□□□□ -1.54
CLF1	YLR117C	SES1	P07284	462 aa	Known RBP	5.41	□□□□□ -1.54
CLF1	YLR117C	BIK1	P11709	440 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	PDI1	P17967	522 aa	Known RBP	5.41	□□□□□ -1.54
CLF1	YLR117C	SPT16	P32558	1035 aa	Known RBP	5.41	□□□□□ -1.54
CLF1	YLR117C	YME2	P32843	850 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	NUF2	P33895	451 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	MPH1	P40562	993 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	APL6	P46682	809 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	PDR11	P40550	1411 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	PET123	P17558	318 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	MAK11	P20484	414 aa	Known RBP	5.41	□□□□□ -1.54
CLF1	YLR117C	MRPS28	P21771	286 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
CLF1	YLR117C	ARO80	Q04052	950 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	ITT1	Q04638	464 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	COG4	Q06096	861 aa		5.41	□□□□□ -1.54
CLF1	YLR117C	MLP1	Q02455	1875 aa	Known RBP	5.4	□□□□□ -1.54
CLF1	YLR117C	NUP188	P52593	1655 aa	Known RBP	5.4	□□□□□ -1.54
CLF1	YLR117C	VMR1	P38735	1592 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	LYS2	P07702	1392 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	TY4B-P	A0A0B7P3V8	1104 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	ARD1	P07347	238 aa	Predicted RBP	5.4	□□□□□ -1.54
CLF1	YLR117C	CDC11	P32458	415 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	RFC5	P38251	354 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	AIM20	P40451	204 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	SEC26	P41810	973 aa	Known RBP	5.4	□□□□□ -1.54
CLF1	YLR117C	CTK3	P46963	296 aa	Predicted RBP	5.4	□□□□□ -1.54
CLF1	YLR117C	GCR2	Q01722	534 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	GGA1	Q06336	557 aa		5.4	□□□□□ -1.54
CLF1	YLR117C	TPD3	P31383	635 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms