RNA–Protein interactions for RNA: YLR073C

RFU1, Transcript of Protein that inhibits Doa4p deubiquitinating activity, yeastyeast

Gene RFU1, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFU1YLR073C TY1A-BRQ12217 440 aa6.18□□□□□ -1.42
RFU1YLR073C TY1A-NL2Q12470 440 aa6.18□□□□□ -1.42
RFU1YLR073C TY1A-GR2Q12485 440 aa6.18□□□□□ -1.42
RFU1YLR073C NUP192P47054 1683 aa6.17□□□□□ -1.42
RFU1YLR073C SEC2P17065 759 aa6.17□□□□□ -1.42
RFU1YLR073C TRK2P28584 889 aa6.17□□□□□ -1.42
RFU1YLR073C RAD9P14737 1309 aa6.17□□□□□ -1.42
RFU1YLR073C AFT1P22149 690 aa6.16□□□□□ -1.42
RFU1YLR073C RAD54P32863 898 aa6.16□□□□□ -1.42
RFU1YLR073C DOT5P40553 215 aa6.16□□□□□ -1.42
RFU1YLR073C GCD11P32481 527 aaKnown RBP6.15□□□□□ -1.42
RFU1YLR073C TAF5P38129 798 aa6.15□□□□□ -1.42
RFU1YLR073C NPR2P39923 615 aa6.15□□□□□ -1.42
RFU1YLR073C PEX21P50091 288 aa6.15□□□□□ -1.42
RFU1YLR073C NOP7P53261 605 aaKnown RBP6.15□□□□□ -1.42
RFU1YLR073C YML020WQ03722 664 aa6.15□□□□□ -1.42
RFU1YLR073C MET32Q12041 191 aa6.15□□□□□ -1.42
RFU1YLR073C SSA2P10592 639 aaKnown RBP6.14□□□□□ -1.43
RFU1YLR073C NPL4P33755 580 aa6.14□□□□□ -1.43
RFU1YLR073C VHR2P40041 505 aa6.14□□□□□ -1.43
RFU1YLR073C CAF120P53836 1060 aa6.14□□□□□ -1.43
RFU1YLR073C URB1P34241 1764 aaKnown RBP6.13□□□□□ -1.43
RFU1YLR073C ALD4P46367 519 aaKnown RBP6.13□□□□□ -1.43
RFU1YLR073C ALD2P47771 506 aa6.13□□□□□ -1.43
RFU1YLR073C PRP5P21372 849 aaPredicted RBP6.12□□□□□ -1.43
RFU1YLR073C ACO2P39533 789 aa6.12□□□□□ -1.43
RFU1YLR073C HST3P53687 447 aa6.12□□□□□ -1.43
RFU1YLR073C SPB4P25808 606 aaPredicted RBP6.11□□□□□ -1.43
RFU1YLR073C GAP1P19145 602 aaPredicted RBP6.1□□□□□ -1.43
RFU1YLR073C RRN7P40992 514 aa6.1□□□□□ -1.43
RFU1YLR073C YJL181WP46987 611 aa6.1□□□□□ -1.43
RFU1YLR073C CTH1P47976 325 aa6.1□□□□□ -1.43
RFU1YLR073C SNU71P53207 620 aaKnown RBP6.1□□□□□ -1.43
RFU1YLR073C FOX2Q02207 900 aaKnown RBP6.1□□□□□ -1.43
RFU1YLR073C TY4B-HP0C2J7 1802 aa6.1□□□□□ -1.43
RFU1YLR073C TY4B-JP47024 1803 aa6.1□□□□□ -1.43
RFU1YLR073C IES2P40154 320 aa6.09□□□□□ -1.43
RFU1YLR073C TUM1Q08686 304 aaKnown RBP6.09□□□□□ -1.43
RFU1YLR073C TFB4Q12004 338 aa6.09□□□□□ -1.43
RFU1YLR073C PSK1P31374 1356 aa6.08□□□□□ -1.44
RFU1YLR073C YJR115WP47152 169 aa6.08□□□□□ -1.44
RFU1YLR073C MSB3P48566 633 aaPredicted RBP6.08□□□□□ -1.44
RFU1YLR073C FKS3Q04952 1785 aa6.08□□□□□ -1.44
RFU1YLR073C CPS1P27614 576 aa6.07□□□□□ -1.44
RFU1YLR073C BRL1P38770 471 aa6.07□□□□□ -1.44
RFU1YLR073C YGR035CP53222 116 aa6.07□□□□□ -1.44
RFU1YLR073C PAT1P25644 796 aaKnown RBP6.06□□□□□ -1.44
RFU1YLR073C RCM1P53972 490 aa6.06□□□□□ -1.44
RFU1YLR073C NOP8Q08287 484 aaPredicted RBP6.06□□□□□ -1.44
RFU1YLR073C SLX8P40072 274 aa6.05□□□□□ -1.44
RFU1YLR073C CSC1Q06538 782 aa6.05□□□□□ -1.44
RFU1YLR073C RAV1P47104 1357 aa6.05□□□□□ -1.44
RFU1YLR073C YRF1-3P0CX14 1859 aa6.04□□□□□ -1.44
RFU1YLR073C YRF1-7P0CX15 1859 aa6.04□□□□□ -1.44
RFU1YLR073C YRF1-6P53819 1859 aa6.04□□□□□ -1.44
RFU1YLR073C PRP40P33203 583 aaKnown RBP6.03□□□□□ -1.44
RFU1YLR073C LSB3P43603 459 aaKnown RBP6.03□□□□□ -1.44
RFU1YLR073C EDE1P34216 1381 aa6.03□□□□□ -1.44
RFU1YLR073C ROM2P51862 1356 aaKnown RBP6.03□□□□□ -1.44
RFU1YLR073C SSM4P40318 1319 aa6.02□□□□□ -1.45
RFU1YLR073C COBP00163 385 aa6.02□□□□□ -1.45
RFU1YLR073C PPH3P32345 308 aa6.02□□□□□ -1.45
RFU1YLR073C PAF1P38351 445 aa6.02□□□□□ -1.45
RFU1YLR073C TCB1Q12466 1186 aa6.02□□□□□ -1.45
RFU1YLR073C NRD1P53617 575 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
RFU1YLR073C YEF3P16521 1044 aaKnown RBP6□□□□□ -1.45
RFU1YLR073C ICP55P40051 511 aa6□□□□□ -1.45
RFU1YLR073C HPF1Q05164 967 aa6□□□□□ -1.45
RFU1YLR073C RTC1Q08281 1341 aa5.99□□□□□ -1.45
RFU1YLR073C YKR075CP36155 307 aa5.99□□□□□ -1.45
RFU1YLR073C GEF1P37020 779 aa5.99□□□□□ -1.45
RFU1YLR073C EAF6P47128 113 aa5.99□□□□□ -1.45
RFU1YLR073C TAF8Q03750 510 aa5.99□□□□□ -1.45
RFU1YLR073C IKI3Q06706 1349 aaKnown RBP5.99□□□□□ -1.45
RFU1YLR073C RSF2P46974 1380 aa5.98□□□□□ -1.45
RFU1YLR073C YKL133CP36066 463 aa5.98□□□□□ -1.45
RFU1YLR073C SUB1P54000 292 aaKnown RBP5.98□□□□□ -1.45
RFU1YLR073C KIN1P13185 1064 aa5.97□□□□□ -1.45
RFU1YLR073C SLM3Q12093 417 aa5.97□□□□□ -1.45
RFU1YLR073C YRF1-4O13559 1382 aa5.96□□□□□ -1.45
RFU1YLR073C SSA4P22202 642 aaKnown RBP5.96□□□□□ -1.46
RFU1YLR073C YDR090CQ03193 310 aa5.96□□□□□ -1.46
RFU1YLR073C PUS1Q12211 544 aaKnown RBP5.96□□□□□ -1.46
RFU1YLR073C ADE6P38972 1358 aaKnown RBP5.95□□□□□ -1.46
RFU1YLR073C MOD5P07884 428 aa5.95□□□□□ -1.46
RFU1YLR073C ASF1P32447 279 aa5.95□□□□□ -1.46
RFU1YLR073C SLD2P34252 453 aa5.95□□□□□ -1.46
RFU1YLR073C ALD3P54114 506 aa5.95□□□□□ -1.46
RFU1YLR073C OPT2Q06593 877 aa5.95□□□□□ -1.46
RFU1YLR073C BRN1P38170 754 aa5.94□□□□□ -1.46
RFU1YLR073C ENP1P38333 483 aaKnown RBP5.94□□□□□ -1.46
RFU1YLR073C NUG1P40010 520 aaKnown RBP5.93□□□□□ -1.46
RFU1YLR073C XKS1P42826 600 aa5.93□□□□□ -1.46
RFU1YLR073C VPS72Q03388 795 aa5.93□□□□□ -1.46
RFU1YLR073C PUS5Q06244 254 aa5.93□□□□□ -1.46
RFU1YLR073C SNF2P22082 1703 aa5.93□□□□□ -1.46
RFU1YLR073C TOM1Q03280 3268 aa5.93□□□□□ -1.46
RFU1YLR073C MNN4P36044 1178 aa5.92□□□□□ -1.46
RFU1YLR073C KIC1P38692 1080 aa5.92□□□□□ -1.46
RFU1YLR073C YIR007WP40566 764 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms