RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C GAL2P13181 574 aa6.3□□□□□ -1.4
YPT52YKR014C NTH2P35172 780 aa6.3□□□□□ -1.4
YPT52YKR014C UTP7P40055 554 aaKnown RBP6.3□□□□□ -1.4
YPT52YKR014C SWI5P08153 709 aa6.29□□□□□ -1.4
YPT52YKR014C RPS6AP0CX37 236 aaKnown RBP6.29□□□□□ -1.4
YPT52YKR014C RPS6BP0CX38 236 aaPredicted RBP6.29□□□□□ -1.4
YPT52YKR014C SUM1P46676 1062 aa6.29□□□□□ -1.4
YPT52YKR014C VTC4P47075 721 aa6.29□□□□□ -1.4
YPT52YKR014C MSN5P52918 1224 aa6.29□□□□□ -1.4
YPT52YKR014C TAF7Q05021 590 aa6.29□□□□□ -1.4
YPT52YKR014C DAL1P32375 460 aa6.28□□□□□ -1.4
YPT52YKR014C AHP1P38013 176 aaKnown RBP6.28□□□□□ -1.4
YPT52YKR014C ECM23Q02710 187 aa6.28□□□□□ -1.4
YPT52YKR014C GAS4Q08271 471 aa6.28□□□□□ -1.4
YPT52YKR014C TY1A-BLQ12266 440 aa6.28□□□□□ -1.4
YPT52YKR014C ACS2P52910 683 aaKnown RBP6.27□□□□□ -1.41
YPT52YKR014C OSH7P38755 437 aa6.26□□□□□ -1.41
YPT52YKR014C CYT1P07143 309 aa6.25□□□□□ -1.41
YPT52YKR014C SSN3P39073 555 aa6.25□□□□□ -1.41
YPT52YKR014C VAN1P23642 535 aa6.24□□□□□ -1.41
YPT52YKR014C ACO2P39533 789 aa6.24□□□□□ -1.41
YPT52YKR014C CAF120P53836 1060 aa6.24□□□□□ -1.41
YPT52YKR014C UBX7P38349 436 aa6.23□□□□□ -1.41
YPT52YKR014C PUP1P25043 261 aa6.22□□□□□ -1.41
YPT52YKR014C CWH41P53008 833 aa6.22□□□□□ -1.41
YPT52YKR014C MCM1P11746 286 aa6.21□□□□□ -1.42
YPT52YKR014C JJJ2P46997 583 aa6.21□□□□□ -1.42
YPT52YKR014C UBP15P50101 1230 aa6.21□□□□□ -1.42
YPT52YKR014C ROM1P53046 1155 aa6.21□□□□□ -1.42
YPT52YKR014C SUB2Q07478 446 aaKnown RBP6.21□□□□□ -1.42
YPT52YKR014C TRS33Q99394 268 aa6.21□□□□□ -1.42
YPT52YKR014C IRE1P32361 1115 aa6.2□□□□□ -1.42
YPT52YKR014C YPQ2Q06328 317 aa6.2□□□□□ -1.42
YPT52YKR014C CDC19P00549 500 aaKnown RBP6.19□□□□□ -1.42
YPT52YKR014C UBP1P25037 809 aa6.19□□□□□ -1.42
YPT52YKR014C YTA6P40328 754 aa6.19□□□□□ -1.42
YPT52YKR014C YIR007WP40566 764 aa6.19□□□□□ -1.42
YPT52YKR014C ROG3P43602 733 aa6.19□□□□□ -1.42
YPT52YKR014C PUF6Q04373 656 aaKnown RBP6.19□□□□□ -1.42
YPT52YKR014C SLA1P32790 1244 aa6.18□□□□□ -1.42
YPT52YKR014C TY1A-MR1Q04215 440 aa6.18□□□□□ -1.42
YPT52YKR014C NGR1P32831 672 aaKnown RBP6.17□□□□□ -1.42
YPT52YKR014C RPL34AP87262 121 aaPredicted RBP6.17□□□□□ -1.42
YPT52YKR014C NOB1Q08444 459 aaKnown RBP6.17□□□□□ -1.42
YPT52YKR014C SCD5P34758 872 aa6.15□□□□□ -1.42
YPT52YKR014C YML083CQ04526 418 aa6.15□□□□□ -1.42
YPT52YKR014C TY1A-DR3Q12441 440 aa6.15□□□□□ -1.42
YPT52YKR014C NAM8Q00539 523 aaKnown RBP6.14□□□□□ -1.43
YPT52YKR014C PUN1Q06991 263 aa6.14□□□□□ -1.43
YPT52YKR014C Q0182Q9ZZW1 134 aa6.14□□□□□ -1.43
YPT52YKR014C RPP1AP05318 106 aaPredicted RBP6.13□□□□□ -1.43
YPT52YKR014C SSA1P10591 642 aaKnown RBP6.13□□□□□ -1.43
YPT52YKR014C YMR265CQ03508 461 aaKnown RBP6.13□□□□□ -1.43
YPT52YKR014C PDC6P26263 563 aaKnown RBP6.12□□□□□ -1.43
YPT52YKR014C SHM1P37292 490 aaPredicted RBP6.12□□□□□ -1.43
YPT52YKR014C LYS5P50113 272 aa6.12□□□□□ -1.43
YPT52YKR014C YGR035CP53222 116 aa6.12□□□□□ -1.43
YPT52YKR014C DIT1P21623 536 aa6.11□□□□□ -1.43
YPT52YKR014C MLF3P32047 452 aa6.11□□□□□ -1.43
YPT52YKR014C CEM1P39525 442 aa6.11□□□□□ -1.43
YPT52YKR014C CUZ1P53899 274 aa6.11□□□□□ -1.43
YPT52YKR014C UTP4Q06679 776 aaKnown RBP6.11□□□□□ -1.43
YPT52YKR014C PSH1Q12161 406 aa6.11□□□□□ -1.43
YPT52YKR014C SRS2P12954 1174 aa6.1□□□□□ -1.43
YPT52YKR014C TRK2P28584 889 aa6.1□□□□□ -1.43
YPT52YKR014C YNL165WP53891 406 aa6.1□□□□□ -1.43
YPT52YKR014C RPS31P05759 152 aaKnown RBP6.09□□□□□ -1.43
YPT52YKR014C MRPL16P38064 232 aa6.09□□□□□ -1.43
YPT52YKR014C ALD4P46367 519 aaKnown RBP6.09□□□□□ -1.43
YPT52YKR014C KRE33P53914 1056 aaKnown RBP6.09□□□□□ -1.43
YPT52YKR014C CWC15Q03772 175 aaKnown RBP6.09□□□□□ -1.43
YPT52YKR014C HPF1Q05164 967 aa6.09□□□□□ -1.43
YPT52YKR014C DPH6Q12429 685 aa6.09□□□□□ -1.43
YPT52YKR014C CCP1P00431 361 aa6.08□□□□□ -1.44
YPT52YKR014C RRN6P32786 894 aa6.08□□□□□ -1.44
YPT52YKR014C HXT5P38695 592 aa6.08□□□□□ -1.44
YPT52YKR014C MTO1P53070 669 aa6.08□□□□□ -1.44
YPT52YKR014C LEU1P07264 779 aaKnown RBP6.07□□□□□ -1.44
YPT52YKR014C FPS1P23900 669 aa6.07□□□□□ -1.44
YPT52YKR014C ADE12P80210 433 aaKnown RBP6.07□□□□□ -1.44
YPT52YKR014C FOX2Q02207 900 aaKnown RBP6.07□□□□□ -1.44
YPT52YKR014C STB3Q12427 513 aa6.07□□□□□ -1.44
YPT52YKR014C SUV3P32580 737 aa6.06□□□□□ -1.44
YPT52YKR014C KAP122P32767 1081 aa6.06□□□□□ -1.44
YPT52YKR014C MTC5Q03897 1148 aa6.06□□□□□ -1.44
YPT52YKR014C PNP1Q05788 311 aa6.06□□□□□ -1.44
YPT52YKR014C YDR461C-AQ2V2P7 80 aa6.06□□□□□ -1.44
YPT52YKR014C RGP1P16664 663 aa6.05□□□□□ -1.44
YPT52YKR014C GEF1P37020 779 aa6.05□□□□□ -1.44
YPT52YKR014C YBR197CP38306 217 aa6.05□□□□□ -1.44
YPT52YKR014C CAB1Q04430 367 aa6.05□□□□□ -1.44
YPT52YKR014C FUR4P05316 633 aaKnown RBP6.04□□□□□ -1.44
YPT52YKR014C MRPL33P20084 86 aa6.04□□□□□ -1.44
YPT52YKR014C SYT1Q06836 1226 aa6.04□□□□□ -1.44
YPT52YKR014C ISC10P32645 267 aa6.03□□□□□ -1.44
YPT52YKR014C DYS1P38791 387 aa6.03□□□□□ -1.44
YPT52YKR014C QDR2P40474 542 aa6.03□□□□□ -1.44
YPT52YKR014C SPR3P41901 512 aa6.03□□□□□ -1.44
YPT52YKR014C ALD2P47771 506 aa6.03□□□□□ -1.44
YPT52YKR014C LDH1P38139 375 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 87 ms