RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	RGA1	P39083	1007 aa		5.06	□□□□□ -1.6
SPE1	YKL184W	YDL176W	Q12027	708 aa		5.06	□□□□□ -1.6
SPE1	YKL184W	SWI5	P08153	709 aa		5.05	□□□□□ -1.6
SPE1	YKL184W	HAP4	P14064	554 aa		5.05	□□□□□ -1.6
SPE1	YKL184W	NTH2	P35172	780 aa		5.05	□□□□□ -1.6
SPE1	YKL184W	YIR007W	P40566	764 aa		5.05	□□□□□ -1.6
SPE1	YKL184W	RPS6A	P0CX37	236 aa	Known RBP	5.04	□□□□□ -1.6
SPE1	YKL184W	RPS6B	P0CX38	236 aa	Predicted RBP	5.04	□□□□□ -1.6
SPE1	YKL184W	PHO87	P25360	923 aa		5.04	□□□□□ -1.6
SPE1	YKL184W	SSN3	P39073	555 aa		5.04	□□□□□ -1.6
SPE1	YKL184W	ROG3	P43602	733 aa		5.04	□□□□□ -1.6
SPE1	YKL184W	TTI1	P36097	1038 aa		5.03	□□□□□ -1.6
SPE1	YKL184W	RLF2	Q12495	606 aa		5.03	□□□□□ -1.6
SPE1	YKL184W	UBP15	P50101	1230 aa		5.02	□□□□□ -1.61
SPE1	YKL184W	TY1A-MR1	Q04215	440 aa		5.02	□□□□□ -1.61
SPE1	YKL184W	CDC19	P00549	500 aa	Known RBP	5.01	□□□□□ -1.61
SPE1	YKL184W	GAL2	P13181	574 aa		5.01	□□□□□ -1.61
SPE1	YKL184W	SSA4	P22202	642 aa	Known RBP	5.01	□□□□□ -1.61
SPE1	YKL184W	CPS1	P27614	576 aa		5.01	□□□□□ -1.61
SPE1	YKL184W	TGL4	P36165	910 aa		5.01	□□□□□ -1.61
SPE1	YKL184W	GAS4	Q08271	471 aa		5.01	□□□□□ -1.61
SPE1	YKL184W	CYT1	P07143	309 aa		5	□□□□□ -1.61
SPE1	YKL184W	IRE1	P32361	1115 aa		5	□□□□□ -1.61
SPE1	YKL184W	JJJ2	P46997	583 aa		5	□□□□□ -1.61
SPE1	YKL184W	ACS2	P52910	683 aa	Known RBP	5	□□□□□ -1.61
SPE1	YKL184W	YGR035C	P53222	116 aa		5	□□□□□ -1.61
SPE1	YKL184W	ECM23	Q02710	187 aa		5	□□□□□ -1.61
SPE1	YKL184W	SLA1	P32790	1244 aa		4.98	□□□□□ -1.61
SPE1	YKL184W	YTA6	P40328	754 aa		4.98	□□□□□ -1.61
SPE1	YKL184W	HPF1	Q05164	967 aa		4.98	□□□□□ -1.61
SPE1	YKL184W	MCM1	P11746	286 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	VAN1	P23642	535 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	LYS5	P50113	272 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	CWH41	P53008	833 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	UBX7	P38349	436 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	CUZ1	P53899	274 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	NAM8	Q00539	523 aa	Known RBP	4.97	□□□□□ -1.61
SPE1	YKL184W	YMR265C	Q03508	461 aa	Known RBP	4.97	□□□□□ -1.61
SPE1	YKL184W	YPQ2	Q06328	317 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	DPH6	Q12429	685 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	TY1A-DR3	Q12441	440 aa		4.97	□□□□□ -1.61
SPE1	YKL184W	DIT1	P21623	536 aa		4.96	□□□□□ -1.62
SPE1	YKL184W	TRK2	P28584	889 aa		4.96	□□□□□ -1.62
SPE1	YKL184W	CEM1	P39525	442 aa		4.96	□□□□□ -1.62
SPE1	YKL184W	TRS33	Q99394	268 aa		4.96	□□□□□ -1.62
SPE1	YKL184W	RPP1A	P05318	106 aa	Predicted RBP	4.95	□□□□□ -1.62
SPE1	YKL184W	ROM1	P53046	1155 aa		4.95	□□□□□ -1.62
SPE1	YKL184W	KRE33	P53914	1056 aa	Known RBP	4.95	□□□□□ -1.62
SPE1	YKL184W	CCP1	P00431	361 aa		4.94	□□□□□ -1.62
SPE1	YKL184W	UBP1	P25037	809 aa		4.94	□□□□□ -1.62
SPE1	YKL184W	Q0182	Q9ZZW1	134 aa		4.94	□□□□□ -1.62
SPE1	YKL184W	PUP1	P25043	261 aa		4.93	□□□□□ -1.62
SPE1	YKL184W	PDC6	P26263	563 aa	Known RBP	4.93	□□□□□ -1.62
SPE1	YKL184W	NGR1	P32831	672 aa	Known RBP	4.93	□□□□□ -1.62
SPE1	YKL184W	ADE12	P80210	433 aa	Known RBP	4.93	□□□□□ -1.62
SPE1	YKL184W	SCD5	P34758	872 aa		4.92	□□□□□ -1.62
SPE1	YKL184W	SHM1	P37292	490 aa	Predicted RBP	4.92	□□□□□ -1.62
SPE1	YKL184W	MRPL16	P38064	232 aa		4.92	□□□□□ -1.62
SPE1	YKL184W	FPS1	P23900	669 aa		4.91	□□□□□ -1.62
SPE1	YKL184W	PUF6	Q04373	656 aa	Known RBP	4.91	□□□□□ -1.62
SPE1	YKL184W	PSH1	Q12161	406 aa		4.91	□□□□□ -1.62
SPE1	YKL184W	STB3	Q12427	513 aa		4.91	□□□□□ -1.62
SPE1	YKL184W	RPS31	P05759	152 aa	Known RBP	4.9	□□□□□ -1.62
SPE1	YKL184W	MLF3	P32047	452 aa		4.9	□□□□□ -1.62
SPE1	YKL184W	UTP4	Q06679	776 aa	Known RBP	4.9	□□□□□ -1.62
SPE1	YKL184W	YDR461C-A	Q2V2P7	80 aa		4.9	□□□□□ -1.62
SPE1	YKL184W	JJJ3	P47138	172 aa		4.89	□□□□□ -1.63
SPE1	YKL184W	YNL165W	P53891	406 aa		4.89	□□□□□ -1.63
SPE1	YKL184W	SYT1	Q06836	1226 aa		4.89	□□□□□ -1.63
SPE1	YKL184W	PUN1	Q06991	263 aa		4.89	□□□□□ -1.63
SPE1	YKL184W	LEU1	P07264	779 aa	Known RBP	4.89	□□□□□ -1.63
SPE1	YKL184W	MTO1	P53070	669 aa		4.89	□□□□□ -1.63
SPE1	YKL184W	SUB2	Q07478	446 aa	Known RBP	4.88	□□□□□ -1.63
SPE1	YKL184W	NOB1	Q08444	459 aa	Known RBP	4.88	□□□□□ -1.63
SPE1	YKL184W	RGP1	P16664	663 aa		4.87	□□□□□ -1.63
SPE1	YKL184W	SPR3	P41901	512 aa		4.87	□□□□□ -1.63
SPE1	YKL184W	RPL34A	P87262	121 aa	Predicted RBP	4.87	□□□□□ -1.63
SPE1	YKL184W	SRS2	P12954	1174 aa		4.86	□□□□□ -1.63
SPE1	YKL184W	KAP122	P32767	1081 aa		4.86	□□□□□ -1.63
SPE1	YKL184W	HXT5	P38695	592 aa		4.86	□□□□□ -1.63
SPE1	YKL184W	FOX2	Q02207	900 aa	Known RBP	4.86	□□□□□ -1.63
SPE1	YKL184W	YML083C	Q04526	418 aa		4.86	□□□□□ -1.63
SPE1	YKL184W	AI1	P03875	834 aa		4.85	□□□□□ -1.63
SPE1	YKL184W	ALD4	P46367	519 aa	Known RBP	4.85	□□□□□ -1.63
SPE1	YKL184W	ALD2	P47771	506 aa		4.85	□□□□□ -1.63
SPE1	YKL184W	RRN6	P32786	894 aa		4.84	□□□□□ -1.63
SPE1	YKL184W	NCL1	P38205	684 aa	Known RBP	4.84	□□□□□ -1.63
SPE1	YKL184W	YBR197C	P38306	217 aa		4.83	□□□□□ -1.64
SPE1	YKL184W	DYS1	P38791	387 aa		4.83	□□□□□ -1.64
SPE1	YKL184W	HEH2	Q03281	663 aa		4.83	□□□□□ -1.64
SPE1	YKL184W	CAB1	Q04430	367 aa		4.83	□□□□□ -1.64
SPE1	YKL184W	RGA2	Q06407	1009 aa		4.83	□□□□□ -1.64
SPE1	YKL184W	MRPL33	P20084	86 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	SUV3	P32580	737 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	LDH1	P38139	375 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	YBR287W	P38355	427 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	ICP55	P40051	511 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	QDR2	P40474	542 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	CWC15	Q03772	175 aa	Known RBP	4.82	□□□□□ -1.64
SPE1	YKL184W	PNP1	Q05788	311 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms