RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C NTH2P35172 780 aa4.55□□□□□ -1.68
YIR040CYIR040C SIS2P36024 562 aa4.55□□□□□ -1.68
YIR040CYIR040C CAF120P53836 1060 aa4.55□□□□□ -1.68
YIR040CYIR040C UBP2Q01476 1272 aa4.55□□□□□ -1.68
YIR040CYIR040C RLF2Q12495 606 aa4.55□□□□□ -1.68
YIR040CYIR040C TSC13Q99190 310 aa4.55□□□□□ -1.68
YIR040CYIR040C CDC19P00549 500 aaKnown RBP4.54□□□□□ -1.68
YIR040CYIR040C RPS6AP0CX37 236 aaKnown RBP4.54□□□□□ -1.68
YIR040CYIR040C RPS6BP0CX38 236 aaPredicted RBP4.54□□□□□ -1.68
YIR040CYIR040C PHO87P25360 923 aa4.54□□□□□ -1.68
YIR040CYIR040C GBP2P25555 427 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
YIR040CYIR040C DAL1P32375 460 aa4.54□□□□□ -1.68
YIR040CYIR040C YIR007WP40566 764 aa4.54□□□□□ -1.68
YIR040CYIR040C SUM1P46676 1062 aa4.54□□□□□ -1.68
YIR040CYIR040C YPQ2Q06328 317 aa4.54□□□□□ -1.68
YIR040CYIR040C TY1A-DR3Q12441 440 aa4.54□□□□□ -1.68
YIR040CYIR040C GAL2P13181 574 aa4.53□□□□□ -1.68
YIR040CYIR040C PUP1P25043 261 aa4.53□□□□□ -1.68
YIR040CYIR040C SLA1P32790 1244 aa4.53□□□□□ -1.68
YIR040CYIR040C OSH7P38755 437 aa4.53□□□□□ -1.68
YIR040CYIR040C YFL034WP43564 1073 aa4.53□□□□□ -1.68
YIR040CYIR040C VTC4P47075 721 aa4.53□□□□□ -1.68
YIR040CYIR040C NAM8Q00539 523 aaKnown RBP4.53□□□□□ -1.68
YIR040CYIR040C ECM23Q02710 187 aa4.53□□□□□ -1.68
YIR040CYIR040C NAP1P25293 417 aaKnown RBP4.52□□□□□ -1.69
YIR040CYIR040C SHM1P37292 490 aaPredicted RBP4.52□□□□□ -1.69
YIR040CYIR040C MSN5P52918 1224 aa4.52□□□□□ -1.69
YIR040CYIR040C ROM1P53046 1155 aa4.52□□□□□ -1.69
YIR040CYIR040C YML083CQ04526 418 aa4.52□□□□□ -1.69
YIR040CYIR040C CCP1P00431 361 aa4.51□□□□□ -1.69
YIR040CYIR040C HAP4P14064 554 aa4.51□□□□□ -1.69
YIR040CYIR040C NOB1Q08444 459 aaKnown RBP4.51□□□□□ -1.69
YIR040CYIR040C CYT1P07143 309 aa4.5□□□□□ -1.69
YIR040CYIR040C CAB3P36076 571 aa4.5□□□□□ -1.69
YIR040CYIR040C ALA1P40825 983 aaKnown RBP4.5□□□□□ -1.69
YIR040CYIR040C ROG3P43602 733 aa4.5□□□□□ -1.69
YIR040CYIR040C TY1A-MR1Q04215 440 aa4.5□□□□□ -1.69
YIR040CYIR040C GAS4Q08271 471 aa4.5□□□□□ -1.69
YIR040CYIR040C RPS31P05759 152 aaKnown RBP4.49□□□□□ -1.69
YIR040CYIR040C UBX7P38349 436 aa4.49□□□□□ -1.69
YIR040CYIR040C JJJ2P46997 583 aa4.49□□□□□ -1.69
YIR040CYIR040C YNL165WP53891 406 aa4.49□□□□□ -1.69
YIR040CYIR040C SSA4P22202 642 aaKnown RBP4.48□□□□□ -1.69
YIR040CYIR040C UBP1P25037 809 aa4.48□□□□□ -1.69
YIR040CYIR040C SUB2Q07478 446 aaKnown RBP4.48□□□□□ -1.69
YIR040CYIR040C MCM1P11746 286 aa4.47□□□□□ -1.69
YIR040CYIR040C IRE1P32361 1115 aa4.47□□□□□ -1.69
YIR040CYIR040C AHP1P38013 176 aaKnown RBP4.47□□□□□ -1.69
YIR040CYIR040C UBP15P50101 1230 aa4.47□□□□□ -1.69
YIR040CYIR040C PSH1Q12161 406 aa4.47□□□□□ -1.69
YIR040CYIR040C PDC6P26263 563 aaKnown RBP4.46□□□□□ -1.7
YIR040CYIR040C SUV3P32580 737 aa4.46□□□□□ -1.7
YIR040CYIR040C EBP2P36049 427 aaKnown RBP4.46□□□□□ -1.7
YIR040CYIR040C VAN1P23642 535 aa4.45□□□□□ -1.7
YIR040CYIR040C NGR1P32831 672 aaKnown RBP4.45□□□□□ -1.7
YIR040CYIR040C MNN4P36044 1178 aa4.45□□□□□ -1.7
YIR040CYIR040C CUZ1P53899 274 aa4.45□□□□□ -1.7
YIR040CYIR040C HXT5P38695 592 aa4.44□□□□□ -1.7
YIR040CYIR040C HPF1Q05164 967 aa4.44□□□□□ -1.7
YIR040CYIR040C MLF3P32047 452 aa4.43□□□□□ -1.7
YIR040CYIR040C ALD2P47771 506 aa4.43□□□□□ -1.7
YIR040CYIR040C Q0182Q9ZZW1 134 aa4.43□□□□□ -1.7
YIR040CYIR040C LEU1P07264 779 aaKnown RBP4.42□□□□□ -1.7
YIR040CYIR040C TPS3P38426 1054 aaKnown RBP4.42□□□□□ -1.7
YIR040CYIR040C TRS33Q99394 268 aa4.42□□□□□ -1.7
YIR040CYIR040C DIT1P21623 536 aa4.41□□□□□ -1.7
YIR040CYIR040C RPS0BP46654 252 aaKnown RBP4.41□□□□□ -1.7
YIR040CYIR040C YGR035CP53222 116 aa4.41□□□□□ -1.7
YIR040CYIR040C YMR265CQ03508 461 aaKnown RBP4.41□□□□□ -1.7
YIR040CYIR040C CWC15Q03772 175 aaKnown RBP4.41□□□□□ -1.7
YIR040CYIR040C CAB1Q04430 367 aa4.41□□□□□ -1.7
YIR040CYIR040C MRPL16P38064 232 aa4.4□□□□□ -1.71
YIR040CYIR040C YFR016CP43597 1233 aaKnown RBP4.4□□□□□ -1.71
YIR040CYIR040C ALD4P46367 519 aaKnown RBP4.4□□□□□ -1.71
YIR040CYIR040C PUN1Q06991 263 aa4.4□□□□□ -1.71
YIR040CYIR040C SCD5P34758 872 aa4.39□□□□□ -1.71
YIR040CYIR040C YBR197CP38306 217 aa4.39□□□□□ -1.71
YIR040CYIR040C YTA6P40328 754 aa4.39□□□□□ -1.71
YIR040CYIR040C CWH41P53008 833 aa4.39□□□□□ -1.71
YIR040CYIR040C KRE33P53914 1056 aaKnown RBP4.39□□□□□ -1.71
YIR040CYIR040C FOX2Q02207 900 aaKnown RBP4.39□□□□□ -1.71
YIR040CYIR040C PUF6Q04373 656 aaKnown RBP4.39□□□□□ -1.71
YIR040CYIR040C SYT1Q06836 1226 aa4.39□□□□□ -1.71
YIR040CYIR040C STB3Q12427 513 aa4.39□□□□□ -1.71
YIR040CYIR040C SRS2P12954 1174 aa4.38□□□□□ -1.71
YIR040CYIR040C CEM1P39525 442 aa4.38□□□□□ -1.71
YIR040CYIR040C JJJ3P47138 172 aa4.38□□□□□ -1.71
YIR040CYIR040C LYS5P50113 272 aa4.38□□□□□ -1.71
YIR040CYIR040C ADE12P80210 433 aaKnown RBP4.38□□□□□ -1.71
YIR040CYIR040C UTP4Q06679 776 aaKnown RBP4.38□□□□□ -1.71
YIR040CYIR040C RGP1P16664 663 aa4.37□□□□□ -1.71
YIR040CYIR040C TRK2P28584 889 aa4.37□□□□□ -1.71
YIR040CYIR040C ISC10P32645 267 aa4.37□□□□□ -1.71
YIR040CYIR040C SPR3P41901 512 aa4.37□□□□□ -1.71
YIR040CYIR040C MTO1P53070 669 aa4.37□□□□□ -1.71
YIR040CYIR040C PNP1Q05788 311 aa4.37□□□□□ -1.71
YIR040CYIR040C YDR461C-AQ2V2P7 80 aa4.37□□□□□ -1.71
YIR040CYIR040C MRPL33P20084 86 aa4.36□□□□□ -1.71
YIR040CYIR040C KAP122P32767 1081 aa4.36□□□□□ -1.71
YIR040CYIR040C BOI1P38041 980 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms