RNA–Protein interactions for RNA: YHR191C

CTF8, Transcript of Subunit of a complex with Ctf18p, yeastyeast

Gene CTF8, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF8YHR191C RTT107P38850 1070 aa7.59□□□□□ -1.19
CTF8YHR191C YGL140CP53120 1219 aa7.59□□□□□ -1.19
CTF8YHR191C SPO1P53541 631 aa7.59□□□□□ -1.19
CTF8YHR191C HXT17P53631 564 aa7.59□□□□□ -1.19
CTF8YHR191C HIM1Q06674 414 aa7.59□□□□□ -1.19
CTF8YHR191C RPO41P13433 1351 aaKnown RBP7.59□□□□□ -1.2
CTF8YHR191C RPS19AP07280 144 aaKnown RBP7.58□□□□□ -1.2
CTF8YHR191C RPS19BP07281 144 aaPredicted RBP7.58□□□□□ -1.2
CTF8YHR191C SIC1P38634 284 aa7.58□□□□□ -1.2
CTF8YHR191C NPR3P38742 1146 aa7.58□□□□□ -1.2
CTF8YHR191C MRX12P47084 519 aa7.58□□□□□ -1.2
CTF8YHR191C RTF1P53064 558 aa7.58□□□□□ -1.2
CTF8YHR191C SES1P07284 462 aaKnown RBP7.57□□□□□ -1.2
CTF8YHR191C SWE1P32944 819 aa7.57□□□□□ -1.2
CTF8YHR191C MNR2P35724 969 aa7.57□□□□□ -1.2
CTF8YHR191C VPS41P38959 992 aa7.57□□□□□ -1.2
CTF8YHR191C CSI1Q04368 295 aa7.57□□□□□ -1.2
CTF8YHR191C VAS1P07806 1104 aaKnown RBP7.56□□□□□ -1.2
CTF8YHR191C ATE1P16639 503 aa7.56□□□□□ -1.2
CTF8YHR191C MAM1P40065 302 aa7.56□□□□□ -1.2
CTF8YHR191C YMR102CQ03177 834 aa7.56□□□□□ -1.2
CTF8YHR191C CAB1Q04430 367 aa7.56□□□□□ -1.2
CTF8YHR191C SWI3P32591 825 aa7.55□□□□□ -1.2
CTF8YHR191C IPL1P38991 367 aa7.55□□□□□ -1.2
CTF8YHR191C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
CTF8YHR191C YNL050CP53952 270 aa7.55□□□□□ -1.2
CTF8YHR191C SSL2Q00578 843 aa7.55□□□□□ -1.2
CTF8YHR191C SRT1Q03175 343 aa7.55□□□□□ -1.2
CTF8YHR191C COG4Q06096 861 aa7.55□□□□□ -1.2
CTF8YHR191C GIN4Q12263 1142 aa7.55□□□□□ -1.2
CTF8YHR191C RPL19AP0CX82 189 aaKnown RBP7.54□□□□□ -1.2
CTF8YHR191C RPL19BP0CX83 189 aaPredicted RBP7.54□□□□□ -1.2
CTF8YHR191C MSH3P25336 1018 aa7.54□□□□□ -1.2
CTF8YHR191C TTI1P36097 1038 aa7.54□□□□□ -1.2
CTF8YHR191C TYS1P36421 394 aaKnown RBP7.54□□□□□ -1.2
CTF8YHR191C MVP1P40959 511 aaKnown RBP7.54□□□□□ -1.2
CTF8YHR191C PRP31P49704 494 aaPredicted RBP7.54□□□□□ -1.2
CTF8YHR191C DSD1P53095 428 aa7.54□□□□□ -1.2
CTF8YHR191C PEX14P53112 341 aa7.54□□□□□ -1.2
CTF8YHR191C VPS72Q03388 795 aa7.54□□□□□ -1.2
CTF8YHR191C MSB4Q12317 492 aa7.54□□□□□ -1.2
CTF8YHR191C YKL068W-AQ3E826 78 aa7.54□□□□□ -1.2
CTF8YHR191C SPT2P06843 333 aaPredicted RBP7.53□□□□□ -1.2
CTF8YHR191C GCD7P32502 381 aaPredicted RBP7.53□□□□□ -1.2
CTF8YHR191C VPS4P52917 437 aa7.53□□□□□ -1.2
CTF8YHR191C RPN7Q06103 429 aaKnown RBP7.53□□□□□ -1.2
CTF8YHR191C TFC8Q12308 588 aa7.53□□□□□ -1.2
CTF8YHR191C HSP82P02829 709 aaKnown RBP7.52□□□□□ -1.21
CTF8YHR191C LEU2P04173 364 aaPredicted RBP7.52□□□□□ -1.21
CTF8YHR191C STE11P23561 717 aa7.52□□□□□ -1.21
CTF8YHR191C HSP104P31539 908 aaKnown RBP7.52□□□□□ -1.21
CTF8YHR191C PRX1P34227 261 aaKnown RBP7.52□□□□□ -1.21
CTF8YHR191C HGH1P48362 394 aaKnown RBP7.52□□□□□ -1.21
CTF8YHR191C ZDS1P50111 915 aaKnown RBP7.52□□□□□ -1.21
CTF8YHR191C TLG2Q08144 397 aa7.52□□□□□ -1.21
CTF8YHR191C FRS2P15625 503 aaKnown RBP7.51□□□□□ -1.21
CTF8YHR191C SIS1P25294 352 aaKnown RBP7.51□□□□□ -1.21
CTF8YHR191C AKL1P38080 1108 aaKnown RBP7.51□□□□□ -1.21
CTF8YHR191C TIF4632P39936 914 aaKnown RBP7.51□□□□□ -1.21
CTF8YHR191C YGL082WP53155 381 aa7.51□□□□□ -1.21
CTF8YHR191C DDP1Q99321 188 aaKnown RBP7.51□□□□□ -1.21
CTF8YHR191C TPM1P17536 199 aaKnown RBP7.5□□□□□ -1.21
CTF8YHR191C MBR1P23493 339 aa7.5□□□□□ -1.21
CTF8YHR191C SWH1P35845 1188 aa7.5□□□□□ -1.21
CTF8YHR191C UBP9P39967 754 aa7.5□□□□□ -1.21
CTF8YHR191C TGL3P40308 642 aa7.5□□□□□ -1.21
CTF8YHR191C TFG2P41896 400 aaPredicted RBP7.5□□□□□ -1.21
CTF8YHR191C MTR4P47047 1073 aaKnown RBP7.5□□□□□ -1.21
CTF8YHR191C CTH1P47976 325 aa7.5□□□□□ -1.21
CTF8YHR191C SGD1Q06132 899 aa7.5□□□□□ -1.21
CTF8YHR191C TRS33Q99394 268 aa7.5□□□□□ -1.21
CTF8YHR191C DCD1P06773 312 aa7.49□□□□□ -1.21
CTF8YHR191C HOP09932 586 aa7.49□□□□□ -1.21
CTF8YHR191C PET123P17558 318 aa7.49□□□□□ -1.21
CTF8YHR191C RRP1P35178 278 aaPredicted RBP7.49□□□□□ -1.21
CTF8YHR191C TAN1P53072 289 aaPredicted RBP7.49□□□□□ -1.21
CTF8YHR191C RIA1P53893 1110 aa7.49□□□□□ -1.21
CTF8YHR191C PLP2Q12017 286 aa7.49□□□□□ -1.21
CTF8YHR191C PSH1Q12161 406 aa7.49□□□□□ -1.21
CTF8YHR191C TY1B-NL2Q99337 1749 aaKnown RBP7.49□□□□□ -1.21
CTF8YHR191C GDT1P38301 280 aaPredicted RBP7.48□□□□□ -1.21
CTF8YHR191C AIM9P40053 627 aaKnown RBP7.48□□□□□ -1.21
CTF8YHR191C RIO2P40160 425 aaKnown RBP7.48□□□□□ -1.21
CTF8YHR191C RCM1P53972 490 aa7.48□□□□□ -1.21
CTF8YHR191C YNL011CP53980 444 aa7.48□□□□□ -1.21
CTF8YHR191C SEC39Q12745 709 aa7.48□□□□□ -1.21
CTF8YHR191C YRF1-2P40105 1681 aa7.47□□□□□ -1.21
CTF8YHR191C PPH3P32345 308 aa7.47□□□□□ -1.21
CTF8YHR191C SAP190P36123 1033 aa7.47□□□□□ -1.21
CTF8YHR191C BBC1P47068 1157 aa7.47□□□□□ -1.21
CTF8YHR191C GYL1Q04322 720 aa7.47□□□□□ -1.21
CTF8YHR191C PUS1Q12211 544 aaKnown RBP7.47□□□□□ -1.21
CTF8YHR191C SWI1P09547 1314 aa7.47□□□□□ -1.21
CTF8YHR191C ADE6P38972 1358 aaKnown RBP7.46□□□□□ -1.21
CTF8YHR191C PSE1P32337 1089 aaKnown RBP7.46□□□□□ -1.22
CTF8YHR191C RRM3P38766 723 aa7.46□□□□□ -1.22
CTF8YHR191C BDP1P46678 594 aa7.46□□□□□ -1.22
CTF8YHR191C YPL150WQ12152 901 aa7.46□□□□□ -1.22
CTF8YHR191C RAD3P06839 778 aa7.45□□□□□ -1.22
CTF8YHR191C CBF5P33322 483 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms