RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W PKH1Q03407 766 aa13.37□□□□□ -0.27
TRM5YHR070W YBL086CP38177 466 aa13.36□□□□□ -0.27
TRM5YHR070W GTT3P39996 337 aa13.36□□□□□ -0.27
TRM5YHR070W ALD2P47771 506 aa13.36□□□□□ -0.27
TRM5YHR070W HGH1P48362 394 aaKnown RBP13.36□□□□□ -0.27
TRM5YHR070W ITC1P53125 1264 aa13.35□□□□□ -0.27
TRM5YHR070W SSA2P10592 639 aaKnown RBP13.33□□□□□ -0.28
TRM5YHR070W NMD2P38798 1089 aaKnown RBP13.33□□□□□ -0.28
TRM5YHR070W RPC31P17890 251 aa13.32□□□□□ -0.28
TRM5YHR070W TOS1P38288 455 aa13.32□□□□□ -0.28
TRM5YHR070W PSH1Q12161 406 aa13.32□□□□□ -0.28
TRM5YHR070W HXT10P43581 546 aa13.31□□□□□ -0.28
TRM5YHR070W ALD3P54114 506 aa13.31□□□□□ -0.28
TRM5YHR070W CTI6Q08923 506 aa13.3□□□□□ -0.28
TRM5YHR070W HAT1Q12341 374 aa13.3□□□□□ -0.28
TRM5YHR070W SSK22P25390 1331 aaPredicted RBP13.3□□□□□ -0.28
TRM5YHR070W UGA2P38067 497 aa13.29□□□□□ -0.28
TRM5YHR070W RAT1Q02792 1006 aaKnown RBP13.29□□□□□ -0.28
TRM5YHR070W MTC5Q03897 1148 aa13.29□□□□□ -0.28
TRM5YHR070W RIX7Q07844 837 aaKnown RBP13.29□□□□□ -0.28
TRM5YHR070W ECM16Q04217 1267 aaKnown RBP13.29□□□□□ -0.28
TRM5YHR070W RFC1P38630 861 aaKnown RBP13.27□□□□□ -0.29
TRM5YHR070W NKP2Q06162 153 aa13.27□□□□□ -0.29
TRM5YHR070W SSF1P38789 453 aaPredicted RBP13.26□□□□□ -0.29
TRM5YHR070W SAC3P46674 1301 aa13.26□□□□□ -0.29
TRM5YHR070W HPC2Q01448 625 aa13.25□□□□□ -0.29
TRM5YHR070W SUP35P05453 685 aaKnown RBP13.24□□□□□ -0.29
TRM5YHR070W CDC16P09798 840 aa13.23□□□□□ -0.29
TRM5YHR070W BDP1P46678 594 aa13.23□□□□□ -0.29
TRM5YHR070W DIB1Q06819 143 aaPredicted RBP13.23□□□□□ -0.29
TRM5YHR070W NCB2Q92317 146 aa13.23□□□□□ -0.29
TRM5YHR070W UBP16Q02863 499 aa13.2□□□□□ -0.3
TRM5YHR070W BDF2Q07442 638 aa13.2□□□□□ -0.3
TRM5YHR070W SNU66Q12420 587 aaPredicted RBP13.2□□□□□ -0.3
TRM5YHR070W RAD50P12753 1312 aa13.19□□□□□ -0.3
TRM5YHR070W SLA1P32790 1244 aa13.19□□□□□ -0.3
TRM5YHR070W GYP5Q12344 894 aa13.18□□□□□ -0.3
TRM5YHR070W NOT3P06102 836 aaKnown RBP13.18□□□□□ -0.3
TRM5YHR070W KTR3P38130 404 aaPredicted RBP13.18□□□□□ -0.3
TRM5YHR070W YGL242CP53066 181 aa13.18□□□□□ -0.3
TRM5YHR070W SYF1Q04048 859 aaPredicted RBP13.18□□□□□ -0.3
TRM5YHR070W ECM21P38167 1117 aaKnown RBP13.17□□□□□ -0.3
TRM5YHR070W ADR1P07248 1323 aa13.15□□□□□ -0.3
TRM5YHR070W PDR18P53756 1333 aa13.15□□□□□ -0.3
TRM5YHR070W PMD1P32634 1753 aa13.15□□□□□ -0.3
TRM5YHR070W SEC18P18759 758 aaKnown RBP13.15□□□□□ -0.3
TRM5YHR070W AI2P03876 854 aa13.14□□□□□ -0.31
TRM5YHR070W PFF1P38244 976 aa13.14□□□□□ -0.31
TRM5YHR070W MLC1P53141 149 aa13.14□□□□□ -0.31
TRM5YHR070W ALO1P54783 526 aaKnown RBP13.14□□□□□ -0.31
TRM5YHR070W NGR1P32831 672 aaKnown RBP13.13□□□□□ -0.31
TRM5YHR070W IRC3Q06683 689 aa13.13□□□□□ -0.31
TRM5YHR070W CAF20P12962 161 aaKnown RBP13.12□□□□□ -0.31
TRM5YHR070W DPH6Q12429 685 aa13.12□□□□□ -0.31
TRM5YHR070W SIT4P20604 311 aa13.11□□□□□ -0.31
TRM5YHR070W FRD1P32614 470 aaKnown RBP13.11□□□□□ -0.31
TRM5YHR070W BRN1P38170 754 aa13.11□□□□□ -0.31
TRM5YHR070W ICP55P40051 511 aa13.11□□□□□ -0.31
TRM5YHR070W GCR2Q01722 534 aa13.11□□□□□ -0.31
TRM5YHR070W RMD1Q03441 430 aa13.11□□□□□ -0.31
TRM5YHR070W RPN7Q06103 429 aaKnown RBP13.11□□□□□ -0.31
TRM5YHR070W MGM1P32266 881 aa13.1□□□□□ -0.31
TRM5YHR070W YIR014WP40570 242 aa13.1□□□□□ -0.31
TRM5YHR070W MRPS35P53292 345 aa13.1□□□□□ -0.31
TRM5YHR070W YNL193WP53870 558 aa13.1□□□□□ -0.31
TRM5YHR070W THI3Q07471 609 aa13.1□□□□□ -0.31
TRM5YHR070W SMY1P32364 656 aaKnown RBP13.09□□□□□ -0.31
TRM5YHR070W ERT1P38140 529 aa13.09□□□□□ -0.31
TRM5YHR070W MSN5P52918 1224 aa13.09□□□□□ -0.31
TRM5YHR070W BRE1Q07457 700 aaKnown RBP13.09□□□□□ -0.31
TRM5YHR070W DUR1,2P32528 1835 aaKnown RBP13.09□□□□□ -0.31
TRM5YHR070W POM152P39685 1337 aa13.09□□□□□ -0.31
TRM5YHR070W VAS1P07806 1104 aaKnown RBP13.08□□□□□ -0.31
TRM5YHR070W RPN1P38764 993 aaKnown RBP13.08□□□□□ -0.31
TRM5YHR070W ERO1Q03103 563 aa13.08□□□□□ -0.31
TRM5YHR070W DLD1P32891 587 aa13.08□□□□□ -0.32
TRM5YHR070W SRC1Q03707 834 aa13.08□□□□□ -0.32
TRM5YHR070W EAF6P47128 113 aa13.07□□□□□ -0.32
TRM5YHR070W PIB2P53191 635 aa13.07□□□□□ -0.32
TRM5YHR070W SAS4Q04003 481 aa13.07□□□□□ -0.32
TRM5YHR070W SPL2P38839 148 aa13.06□□□□□ -0.32
TRM5YHR070W EPS1P40557 701 aa13.06□□□□□ -0.32
TRM5YHR070W YKL222CP35995 705 aa13.05□□□□□ -0.32
TRM5YHR070W GLO3P38682 493 aaKnown RBP13.05□□□□□ -0.32
TRM5YHR070W HAL5P38970 855 aaKnown RBP13.05□□□□□ -0.32
TRM5YHR070W CWH41P53008 833 aa13.05□□□□□ -0.32
TRM5YHR070W HXT13P39924 564 aa13.04□□□□□ -0.32
TRM5YHR070W NUG1P40010 520 aaKnown RBP13.04□□□□□ -0.32
TRM5YHR070W HXT17P53631 564 aa13.04□□□□□ -0.32
TRM5YHR070W RIM20Q12033 661 aa13.04□□□□□ -0.32
TRM5YHR070W KRE2P27809 442 aa13.03□□□□□ -0.32
TRM5YHR070W KTR1P27810 393 aaKnown RBP13.03□□□□□ -0.32
TRM5YHR070W RRI2Q12348 645 aa13.03□□□□□ -0.32
TRM5YHR070W RPT4P53549 437 aaKnown RBP13.03□□□□□ -0.32
TRM5YHR070W FIG2P25653 1609 aa13.02□□□□□ -0.32
TRM5YHR070W PIF1P07271 859 aa13.02□□□□□ -0.33
TRM5YHR070W AAP1P37898 856 aaKnown RBP13.02□□□□□ -0.33
TRM5YHR070W OPY1P38271 328 aa13.02□□□□□ -0.33
TRM5YHR070W CTT1P06115 562 aa13.01□□□□□ -0.33
TRM5YHR070W KIN4Q01919 800 aa13.01□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms