RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W PDC5P16467 563 aaKnown RBP3.87□□□□□ -1.79
CUL3YGR003W STE20Q03497 939 aaKnown RBP3.86□□□□□ -1.79
CUL3YGR003W ALA1P40825 983 aaKnown RBP3.86□□□□□ -1.79
CUL3YGR003W CSN12P47130 423 aa3.86□□□□□ -1.79
CUL3YGR003W MRPL16P38064 232 aa3.85□□□□□ -1.79
CUL3YGR003W INP52P50942 1183 aa3.85□□□□□ -1.79
CUL3YGR003W GLC3P32775 704 aa3.85□□□□□ -1.79
CUL3YGR003W FRA1Q07825 749 aa3.85□□□□□ -1.79
CUL3YGR003W IRE1P32361 1115 aa3.84□□□□□ -1.79
CUL3YGR003W UTR2P32623 467 aa3.84□□□□□ -1.79
CUL3YGR003W UTP7P40055 554 aaKnown RBP3.84□□□□□ -1.79
CUL3YGR003W SPT2P06843 333 aaPredicted RBP3.83□□□□□ -1.8
CUL3YGR003W TBS1P38114 1094 aa3.83□□□□□ -1.8
CUL3YGR003W JJJ2P46997 583 aa3.83□□□□□ -1.8
CUL3YGR003W YNR021WP53723 404 aaKnown RBP3.83□□□□□ -1.8
CUL3YGR003W MAK16P10962 306 aaPredicted RBP3.82□□□□□ -1.8
CUL3YGR003W ISR1Q06098 443 aaKnown RBP3.82□□□□□ -1.8
CUL3YGR003W STB3Q12427 513 aa3.82□□□□□ -1.8
CUL3YGR003W SUM1P46676 1062 aa3.81□□□□□ -1.8
CUL3YGR003W AVT1P47082 602 aa3.81□□□□□ -1.8
CUL3YGR003W TY1A-DR2Q03964 440 aaKnown RBP3.8□□□□□ -1.8
CUL3YGR003W TPS3P38426 1054 aaKnown RBP3.79□□□□□ -1.8
CUL3YGR003W SPR3P41901 512 aa3.79□□□□□ -1.8
CUL3YGR003W SHM1P37292 490 aaPredicted RBP3.79□□□□□ -1.8
CUL3YGR003W PSH1Q12161 406 aa3.79□□□□□ -1.8
CUL3YGR003W PDC6P26263 563 aaKnown RBP3.78□□□□□ -1.8
CUL3YGR003W MRX12P47084 519 aa3.78□□□□□ -1.8
CUL3YGR003W BUD9P53226 547 aa3.76□□□□□ -1.81
CUL3YGR003W NHA1Q99271 985 aa3.76□□□□□ -1.81
CUL3YGR003W RPP1AP05318 106 aaPredicted RBP3.75□□□□□ -1.81
CUL3YGR003W AIM7Q12156 149 aa3.75□□□□□ -1.81
CUL3YGR003W EMP47P43555 445 aa3.75□□□□□ -1.81
CUL3YGR003W APL6P46682 809 aa3.75□□□□□ -1.81
CUL3YGR003W MSC7P38694 644 aa3.74□□□□□ -1.81
CUL3YGR003W HAL5P38970 855 aaKnown RBP3.74□□□□□ -1.81
CUL3YGR003W SLX8P40072 274 aa3.74□□□□□ -1.81
CUL3YGR003W ISF1P32488 338 aa3.73□□□□□ -1.81
CUL3YGR003W PGM2P37012 569 aaKnown RBP3.73□□□□□ -1.81
CUL3YGR003W ALG14P38242 237 aa3.72□□□□□ -1.81
CUL3YGR003W RPS31P05759 152 aaKnown RBP3.72□□□□□ -1.81
CUL3YGR003W AI3P03877 415 aa3.71□□□□□ -1.82
CUL3YGR003W LEU1P07264 779 aaKnown RBP3.71□□□□□ -1.82
CUL3YGR003W SSA2P10592 639 aaKnown RBP3.71□□□□□ -1.82
CUL3YGR003W PGM1P33401 570 aaKnown RBP3.71□□□□□ -1.82
CUL3YGR003W AOS1Q06624 347 aa3.71□□□□□ -1.82
CUL3YGR003W DMA1P38823 416 aa3.7□□□□□ -1.82
CUL3YGR003W HDA3Q06623 655 aa3.7□□□□□ -1.82
CUL3YGR003W MED7Q08278 222 aa3.7□□□□□ -1.82
CUL3YGR003W MCM16Q12262 181 aa3.7□□□□□ -1.82
CUL3YGR003W SAC7P17121 654 aa3.69□□□□□ -1.82
CUL3YGR003W RGP1P16664 663 aa3.68□□□□□ -1.82
CUL3YGR003W NAB2P32505 525 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
CUL3YGR003W LIP5P32875 414 aa3.68□□□□□ -1.82
CUL3YGR003W HPC2Q01448 625 aa3.68□□□□□ -1.82
CUL3YGR003W TRP3P00937 484 aa3.67□□□□□ -1.82
CUL3YGR003W COQ2P32378 372 aa3.67□□□□□ -1.82
CUL3YGR003W YKR073CP36153 106 aa3.67□□□□□ -1.82
CUL3YGR003W ALD2P47771 506 aa3.67□□□□□ -1.82
CUL3YGR003W ARI1P53111 347 aaKnown RBP3.67□□□□□ -1.82
CUL3YGR003W CSE4P36012 229 aa3.67□□□□□ -1.82
CUL3YGR003W KAE1P36132 386 aa3.67□□□□□ -1.82
CUL3YGR003W SOH1P38633 127 aa3.67□□□□□ -1.82
CUL3YGR003W HEH2Q03281 663 aa3.67□□□□□ -1.82
CUL3YGR003W YPQ2Q06328 317 aa3.67□□□□□ -1.82
CUL3YGR003W GAS5Q08193 484 aa3.67□□□□□ -1.82
CUL3YGR003W ELM1P32801 640 aa3.66□□□□□ -1.82
CUL3YGR003W YTA6P40328 754 aa3.66□□□□□ -1.82
CUL3YGR003W ATG3P40344 310 aa3.66□□□□□ -1.82
CUL3YGR003W UTP13Q05946 817 aaKnown RBP3.66□□□□□ -1.82
CUL3YGR003W NAR1P23503 491 aaKnown RBP3.66□□□□□ -1.82
CUL3YGR003W RRM3P38766 723 aa3.66□□□□□ -1.82
CUL3YGR003W TFB3Q03290 321 aa3.66□□□□□ -1.82
CUL3YGR003W SPT5P27692 1063 aaKnown RBP3.64□□□□□ -1.83
CUL3YGR003W TOS1P38288 455 aa3.64□□□□□ -1.83
CUL3YGR003W GIS4Q04233 774 aa3.64□□□□□ -1.83
CUL3YGR003W PUB1P32588 453 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
CUL3YGR003W SFA1P32771 386 aa3.64□□□□□ -1.83
CUL3YGR003W PRK1P40494 810 aa3.64□□□□□ -1.83
CUL3YGR003W SWI5P08153 709 aa3.63□□□□□ -1.83
CUL3YGR003W YLR122CQ12312 125 aa3.63□□□□□ -1.83
CUL3YGR003W CTH1P47976 325 aa3.63□□□□□ -1.83
CUL3YGR003W YNL165WP53891 406 aa3.63□□□□□ -1.83
CUL3YGR003W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CUL3YGR003W UBP5P39944 805 aa3.62□□□□□ -1.83
CUL3YGR003W YDJ1P25491 409 aaKnown RBP3.62□□□□□ -1.83
CUL3YGR003W BRE4Q07660 1125 aa3.62□□□□□ -1.83
CUL3YGR003W MLF3P32047 452 aa3.6□□□□□ -1.83
CUL3YGR003W NCL1P38205 684 aaKnown RBP3.6□□□□□ -1.83
CUL3YGR003W MCM1P11746 286 aa3.59□□□□□ -1.83
CUL3YGR003W YGR130CP53278 816 aa3.59□□□□□ -1.83
CUL3YGR003W CHS2P14180 963 aa3.59□□□□□ -1.84
CUL3YGR003W RSC6P25632 483 aa3.59□□□□□ -1.84
CUL3YGR003W YPP1P46951 817 aa3.59□□□□□ -1.84
CUL3YGR003W Q0182Q9ZZW1 134 aa3.59□□□□□ -1.84
CUL3YGR003W SAF1P38352 637 aa3.58□□□□□ -1.84
CUL3YGR003W AIM9P40053 627 aaKnown RBP3.58□□□□□ -1.84
CUL3YGR003W YBL036CP38197 257 aa3.58□□□□□ -1.84
CUL3YGR003W RPS6AP0CX37 236 aaKnown RBP3.57□□□□□ -1.84
CUL3YGR003W RPS6BP0CX38 236 aaPredicted RBP3.57□□□□□ -1.84
CUL3YGR003W MTO1P53070 669 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms