RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W ACF4P47129 309 aa5.13□□□□□ -1.59
PTR3YFR029W DAN4P47179 1161 aa5.13□□□□□ -1.59
PTR3YFR029W ACS2P52910 683 aaKnown RBP5.13□□□□□ -1.59
PTR3YFR029W SPR28Q04921 423 aa5.13□□□□□ -1.59
PTR3YFR029W BDF2Q07442 638 aa5.13□□□□□ -1.59
PTR3YFR029W BOI1P38041 980 aaKnown RBP5.13□□□□□ -1.59
PTR3YFR029W RTF1P53064 558 aa5.13□□□□□ -1.59
PTR3YFR029W GPI13Q07830 1017 aa5.13□□□□□ -1.59
PTR3YFR029W NKP1Q12493 238 aa5.13□□□□□ -1.59
PTR3YFR029W THS1P04801 734 aaKnown RBP5.12□□□□□ -1.59
PTR3YFR029W CHL1P22516 861 aaPredicted RBP5.12□□□□□ -1.59
PTR3YFR029W PHO87P25360 923 aa5.12□□□□□ -1.59
PTR3YFR029W MCM2P29469 868 aa5.12□□□□□ -1.59
PTR3YFR029W VPS24P36095 224 aaKnown RBP5.12□□□□□ -1.59
PTR3YFR029W YNL115CP53925 644 aa5.12□□□□□ -1.59
PTR3YFR029W YPR084WQ06821 456 aa5.12□□□□□ -1.59
PTR3YFR029W CDC53Q12018 815 aaKnown RBP5.12□□□□□ -1.59
PTR3YFR029W PIN2Q12057 282 aa5.12□□□□□ -1.59
PTR3YFR029W YGR161W-CQ3E744 92 aa5.12□□□□□ -1.59
PTR3YFR029W GRX7P38068 203 aa5.11□□□□□ -1.59
PTR3YFR029W VPS27P40343 622 aaKnown RBP5.11□□□□□ -1.59
PTR3YFR029W EMP47P43555 445 aa5.11□□□□□ -1.59
PTR3YFR029W PPM2Q08282 695 aa5.11□□□□□ -1.59
PTR3YFR029W DCW1P36091 449 aa5.11□□□□□ -1.59
PTR3YFR029W NOC2P39744 710 aaKnown RBP5.11□□□□□ -1.59
PTR3YFR029W QDR1P40475 563 aa5.11□□□□□ -1.59
PTR3YFR029W NOP2P40991 618 aaKnown RBP5.11□□□□□ -1.59
PTR3YFR029W ITC1P53125 1264 aa5.11□□□□□ -1.59
PTR3YFR029W FOL1P53848 824 aa5.11□□□□□ -1.59
PTR3YFR029W TUM1Q08686 304 aaKnown RBP5.11□□□□□ -1.59
PTR3YFR029W STI1P15705 589 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
PTR3YFR029W CDC11P32458 415 aa5.1□□□□□ -1.59
PTR3YFR029W FRA1Q07825 749 aa5.1□□□□□ -1.59
PTR3YFR029W SRS2P12954 1174 aa5.09□□□□□ -1.59
PTR3YFR029W PWP2P25635 923 aaKnown RBP5.09□□□□□ -1.59
PTR3YFR029W MGE1P38523 228 aa5.09□□□□□ -1.59
PTR3YFR029W ENT2Q05785 613 aa5.09□□□□□ -1.59
PTR3YFR029W PHO4P07270 312 aaKnown RBP5.09□□□□□ -1.6
PTR3YFR029W TAF13P11747 167 aa5.09□□□□□ -1.6
PTR3YFR029W SUV3P32580 737 aa5.09□□□□□ -1.6
PTR3YFR029W RPS0AP32905 252 aaKnown RBP5.09□□□□□ -1.6
PTR3YFR029W PEX8P53248 589 aa5.09□□□□□ -1.6
PTR3YFR029W ERF2Q06551 359 aa5.09□□□□□ -1.6
PTR3YFR029W YDL129WQ07555 291 aa5.09□□□□□ -1.6
PTR3YFR029W MET6P05694 767 aaKnown RBP5.08□□□□□ -1.6
PTR3YFR029W RAD27P26793 382 aa5.08□□□□□ -1.6
PTR3YFR029W PRE3P38624 215 aa5.08□□□□□ -1.6
PTR3YFR029W PUS6P53294 404 aa5.08□□□□□ -1.6
PTR3YFR029W YOR378WQ08902 515 aa5.08□□□□□ -1.6
PTR3YFR029W SNU66Q12420 587 aaPredicted RBP5.08□□□□□ -1.6
PTR3YFR029W ERP4Q12450 207 aa5.08□□□□□ -1.6
PTR3YFR029W LSO1Q3E827 93 aa5.08□□□□□ -1.6
PTR3YFR029W HAP4P14064 554 aa5.07□□□□□ -1.6
PTR3YFR029W YGL081WP53156 320 aa5.07□□□□□ -1.6
PTR3YFR029W JIP4Q03361 876 aa5.07□□□□□ -1.6
PTR3YFR029W ENV9Q08651 330 aa5.07□□□□□ -1.6
PTR3YFR029W TIM23P32897 222 aa5.07□□□□□ -1.6
PTR3YFR029W NUP82P40368 713 aa5.07□□□□□ -1.6
PTR3YFR029W MPP10P47083 593 aaKnown RBP5.07□□□□□ -1.6
PTR3YFR029W HUL5P53119 910 aa5.07□□□□□ -1.6
PTR3YFR029W MIP1P15801 1254 aa5.06□□□□□ -1.6
PTR3YFR029W HOS4P40480 1083 aa5.06□□□□□ -1.6
PTR3YFR029W YJL049WP47048 450 aa5.06□□□□□ -1.6
PTR3YFR029W TUB4P53378 473 aa5.06□□□□□ -1.6
PTR3YFR029W CEF1Q03654 590 aaPredicted RBP5.06□□□□□ -1.6
PTR3YFR029W AGE1Q04412 482 aa5.06□□□□□ -1.6
PTR3YFR029W UTP13Q05946 817 aaKnown RBP5.06□□□□□ -1.6
PTR3YFR029W FUR4P05316 633 aaKnown RBP5.06□□□□□ -1.6
PTR3YFR029W MAD1P40957 749 aa5.06□□□□□ -1.6
PTR3YFR029W PUN1Q06991 263 aa5.06□□□□□ -1.6
PTR3YFR029W PSK2Q08217 1101 aa5.06□□□□□ -1.6
PTR3YFR029W GAS4Q08271 471 aa5.06□□□□□ -1.6
PTR3YFR029W WRS1Q12109 432 aaKnown RBP5.06□□□□□ -1.6
PTR3YFR029W TSC13Q99190 310 aa5.06□□□□□ -1.6
PTR3YFR029W HTA1P04911 132 aaKnown RBP5.05□□□□□ -1.6
PTR3YFR029W HTA2P04912 132 aa5.05□□□□□ -1.6
PTR3YFR029W PIF1P07271 859 aa5.05□□□□□ -1.6
PTR3YFR029W MAL31P38156 614 aa5.05□□□□□ -1.6
PTR3YFR029W RTT106P40161 455 aa5.05□□□□□ -1.6
PTR3YFR029W FIG4P42837 879 aa5.05□□□□□ -1.6
PTR3YFR029W NHA1Q99271 985 aa5.05□□□□□ -1.6
PTR3YFR029W RPN12P32496 274 aa5.04□□□□□ -1.6
PTR3YFR029W MFT1P33441 392 aaKnown RBP5.04□□□□□ -1.6
PTR3YFR029W KTR2P33550 425 aa5.04□□□□□ -1.6
PTR3YFR029W IES5P40060 125 aa5.04□□□□□ -1.6
PTR3YFR029W DAK2P43550 591 aa5.04□□□□□ -1.6
PTR3YFR029W KEX2P13134 814 aa5.04□□□□□ -1.6
PTR3YFR029W GRX1P25373 110 aaKnown RBP5.04□□□□□ -1.6
PTR3YFR029W PAF1P38351 445 aa5.04□□□□□ -1.6
PTR3YFR029W CRP1P38845 465 aaKnown RBP5.04□□□□□ -1.6
PTR3YFR029W MSH4P40965 878 aaPredicted RBP5.04□□□□□ -1.6
PTR3YFR029W BDP1P46678 594 aa5.04□□□□□ -1.6
PTR3YFR029W MEH1Q02205 184 aa5.04□□□□□ -1.6
PTR3YFR029W TRS120Q04183 1289 aa5.04□□□□□ -1.6
PTR3YFR029W RPP1BP10622 106 aaKnown RBP5.03□□□□□ -1.6
PTR3YFR029W RPT1P33299 467 aaKnown RBP5.03□□□□□ -1.6
PTR3YFR029W EBP2P36049 427 aaKnown RBP5.03□□□□□ -1.6
PTR3YFR029W ESF2P53743 316 aaKnown RBP5.03□□□□□ -1.6
PTR3YFR029W RMD1Q03441 430 aa5.03□□□□□ -1.6
PTR3YFR029W MTC5Q03897 1148 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms