RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W DAT1P13483 248 aaKnown RBP5.91□□□□□ -1.46
LOC1YFR001W PDI1P17967 522 aaKnown RBP5.91□□□□□ -1.46
LOC1YFR001W YFL034WP43564 1073 aa5.91□□□□□ -1.46
LOC1YFR001W ECM23Q02710 187 aa5.91□□□□□ -1.46
LOC1YFR001W WTM2Q12206 467 aa5.91□□□□□ -1.46
LOC1YFR001W TBS1P38114 1094 aa5.9□□□□□ -1.46
LOC1YFR001W OSH7P38755 437 aa5.9□□□□□ -1.46
LOC1YFR001W AIM9P40053 627 aaKnown RBP5.9□□□□□ -1.46
LOC1YFR001W SLX8P40072 274 aa5.9□□□□□ -1.46
LOC1YFR001W ACS2P52910 683 aaKnown RBP5.9□□□□□ -1.46
LOC1YFR001W HAP4P14064 554 aa5.89□□□□□ -1.47
LOC1YFR001W TRK2P28584 889 aa5.89□□□□□ -1.47
LOC1YFR001W YML083CQ04526 418 aa5.89□□□□□ -1.47
LOC1YFR001W NTH2P35172 780 aa5.88□□□□□ -1.47
LOC1YFR001W DLD3P39976 496 aaKnown RBP5.87□□□□□ -1.47
LOC1YFR001W ROG3P43602 733 aa5.87□□□□□ -1.47
LOC1YFR001W YGR035CP53222 116 aa5.87□□□□□ -1.47
LOC1YFR001W TY1A-MR1Q04215 440 aa5.87□□□□□ -1.47
LOC1YFR001W HPF1Q05164 967 aa5.87□□□□□ -1.47
LOC1YFR001W CCP1P00431 361 aa5.86□□□□□ -1.47
LOC1YFR001W SWI5P08153 709 aa5.86□□□□□ -1.47
LOC1YFR001W RPS6AP0CX37 236 aaKnown RBP5.86□□□□□ -1.47
LOC1YFR001W RPS6BP0CX38 236 aaPredicted RBP5.86□□□□□ -1.47
LOC1YFR001W VTC4P47075 721 aa5.86□□□□□ -1.47
LOC1YFR001W ROM1P53046 1155 aa5.86□□□□□ -1.47
LOC1YFR001W GAS4Q08271 471 aa5.86□□□□□ -1.47
LOC1YFR001W CDC19P00549 500 aaKnown RBP5.85□□□□□ -1.47
LOC1YFR001W UBX7P38349 436 aa5.85□□□□□ -1.47
LOC1YFR001W UTP7P40055 554 aaKnown RBP5.84□□□□□ -1.47
LOC1YFR001W CYT1P07143 309 aa5.83□□□□□ -1.48
LOC1YFR001W SSA1P10591 642 aaKnown RBP5.83□□□□□ -1.48
LOC1YFR001W SUM1P46676 1062 aa5.83□□□□□ -1.48
LOC1YFR001W NAM8Q00539 523 aaKnown RBP5.83□□□□□ -1.48
LOC1YFR001W DAL1P32375 460 aa5.82□□□□□ -1.48
LOC1YFR001W YPQ2Q06328 317 aa5.82□□□□□ -1.48
LOC1YFR001W SSN3P39073 555 aa5.81□□□□□ -1.48
LOC1YFR001W NRD1P53617 575 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48 RIP-Chip
LOC1YFR001W VAN1P23642 535 aa5.8□□□□□ -1.48
LOC1YFR001W UBP1P25037 809 aa5.8□□□□□ -1.48
LOC1YFR001W LSB3P43603 459 aaKnown RBP5.8□□□□□ -1.48
LOC1YFR001W MSN5P52918 1224 aa5.79□□□□□ -1.48
LOC1YFR001W RPL34AP87262 121 aaPredicted RBP5.79□□□□□ -1.48
LOC1YFR001W PUF6Q04373 656 aaKnown RBP5.79□□□□□ -1.48
LOC1YFR001W MCM1P11746 286 aa5.78□□□□□ -1.48
LOC1YFR001W NGR1P32831 672 aaKnown RBP5.78□□□□□ -1.48
LOC1YFR001W GEF1P37020 779 aa5.78□□□□□ -1.48
LOC1YFR001W ALA1P40825 983 aaKnown RBP5.78□□□□□ -1.48
LOC1YFR001W CWC15Q03772 175 aaKnown RBP5.78□□□□□ -1.48
LOC1YFR001W DPH6Q12429 685 aa5.78□□□□□ -1.48
LOC1YFR001W TRS33Q99394 268 aa5.78□□□□□ -1.48
LOC1YFR001W SLA1P32790 1244 aa5.77□□□□□ -1.49
LOC1YFR001W LYS5P50113 272 aa5.77□□□□□ -1.49
LOC1YFR001W SUV3P32580 737 aa5.76□□□□□ -1.49
LOC1YFR001W JJJ3P47138 172 aa5.76□□□□□ -1.49
LOC1YFR001W CWH41P53008 833 aa5.75□□□□□ -1.49
LOC1YFR001W PUN1Q06991 263 aa5.75□□□□□ -1.49
LOC1YFR001W TY1A-DR3Q12441 440 aa5.75□□□□□ -1.49
LOC1YFR001W SRS2P12954 1174 aa5.74□□□□□ -1.49
LOC1YFR001W SHM1P37292 490 aaPredicted RBP5.74□□□□□ -1.49
LOC1YFR001W TPS3P38426 1054 aaKnown RBP5.74□□□□□ -1.49
LOC1YFR001W JJJ2P46997 583 aa5.74□□□□□ -1.49
LOC1YFR001W UBP15P50101 1230 aa5.74□□□□□ -1.49
LOC1YFR001W CUZ1P53899 274 aa5.74□□□□□ -1.49
LOC1YFR001W RPS31P05759 152 aaKnown RBP5.73□□□□□ -1.49
LOC1YFR001W IRE1P32361 1115 aa5.73□□□□□ -1.49
LOC1YFR001W AHP1P38013 176 aaKnown RBP5.73□□□□□ -1.49
LOC1YFR001W HXT5P38695 592 aa5.73□□□□□ -1.49
LOC1YFR001W CDC3P32457 520 aaKnown RBP5.72□□□□□ -1.49
LOC1YFR001W ALD4P46367 519 aaKnown RBP5.72□□□□□ -1.49
LOC1YFR001W YNL165WP53891 406 aa5.72□□□□□ -1.49
LOC1YFR001W PNP1Q05788 311 aa5.72□□□□□ -1.49
LOC1YFR001W ICP55P40051 511 aa5.71□□□□□ -1.5
LOC1YFR001W Q0182Q9ZZW1 134 aa5.71□□□□□ -1.5
LOC1YFR001W SCD5P34758 872 aa5.7□□□□□ -1.5
LOC1YFR001W YBR197CP38306 217 aa5.7□□□□□ -1.5
LOC1YFR001W CAB1Q04430 367 aa5.7□□□□□ -1.5
LOC1YFR001W DIT1P21623 536 aa5.69□□□□□ -1.5
LOC1YFR001W PDC6P26263 563 aaKnown RBP5.69□□□□□ -1.5
LOC1YFR001W PSH1Q12161 406 aa5.69□□□□□ -1.5
LOC1YFR001W PUS1Q12211 544 aaKnown RBP5.69□□□□□ -1.5
LOC1YFR001W MLF3P32047 452 aa5.68□□□□□ -1.5
LOC1YFR001W CEM1P39525 442 aa5.68□□□□□ -1.5
LOC1YFR001W YMR265CQ03508 461 aaKnown RBP5.68□□□□□ -1.5
LOC1YFR001W UTP4Q06679 776 aaKnown RBP5.68□□□□□ -1.5
LOC1YFR001W ISC10P32645 267 aa5.67□□□□□ -1.5
LOC1YFR001W YTA6P40328 754 aa5.67□□□□□ -1.5
LOC1YFR001W FOX2Q02207 900 aaKnown RBP5.67□□□□□ -1.5
LOC1YFR001W SYT1Q06836 1226 aa5.67□□□□□ -1.5
LOC1YFR001W LEU1P07264 779 aaKnown RBP5.66□□□□□ -1.5
LOC1YFR001W MRPL33P20084 86 aa5.66□□□□□ -1.5
LOC1YFR001W RRN6P32786 894 aa5.66□□□□□ -1.5
LOC1YFR001W BOL3P39724 118 aa5.66□□□□□ -1.5
LOC1YFR001W KAR5Q04746 504 aa5.66□□□□□ -1.5
LOC1YFR001W FUR4P05316 633 aaKnown RBP5.65□□□□□ -1.5
LOC1YFR001W ALD2P47771 506 aa5.65□□□□□ -1.5
LOC1YFR001W KRE33P53914 1056 aaKnown RBP5.65□□□□□ -1.5
LOC1YFR001W YDR461C-AQ2V2P7 80 aa5.65□□□□□ -1.5
LOC1YFR001W LSO1Q3E827 93 aa5.65□□□□□ -1.5
LOC1YFR001W MDJ1P35191 511 aa5.64□□□□□ -1.51
LOC1YFR001W BOI1P38041 980 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms