RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W DCD1P06773 312 aa4.36□□□□□ -1.71
CHD1YER164W MRP7P12687 371 aa4.36□□□□□ -1.71
CHD1YER164W MAM1P40065 302 aa4.36□□□□□ -1.71
CHD1YER164W VPS60Q03390 229 aa4.36□□□□□ -1.71
CHD1YER164W PCT1P13259 424 aa4.35□□□□□ -1.71
CHD1YER164W DOT5P40553 215 aa4.35□□□□□ -1.71
CHD1YER164W BDP1P46678 594 aa4.35□□□□□ -1.71
CHD1YER164W YGL082WP53155 381 aa4.35□□□□□ -1.71
CHD1YER164W YOL057WQ08225 711 aa4.35□□□□□ -1.71
CHD1YER164W FKS3Q04952 1785 aa4.35□□□□□ -1.71
CHD1YER164W SIR4P11978 1358 aa4.35□□□□□ -1.71
CHD1YER164W RPS19AP07280 144 aaKnown RBP4.35□□□□□ -1.71
CHD1YER164W RPS19BP07281 144 aaPredicted RBP4.35□□□□□ -1.71
CHD1YER164W YBP2P53169 641 aa4.35□□□□□ -1.71
CHD1YER164W PIB2P53191 635 aa4.35□□□□□ -1.71
CHD1YER164W NSE3Q05541 303 aa4.35□□□□□ -1.71
CHD1YER164W AI2P03876 854 aa4.35□□□□□ -1.71
CHD1YER164W YGR130CP53278 816 aa4.35□□□□□ -1.71
CHD1YER164W LPD1P09624 499 aaKnown RBP4.34□□□□□ -1.71
CHD1YER164W ATG13Q06628 738 aa4.34□□□□□ -1.71
CHD1YER164W BOI2P39969 1040 aa4.34□□□□□ -1.71
CHD1YER164W BIK1P11709 440 aa4.34□□□□□ -1.72
CHD1YER164W MSP1P28737 362 aa4.34□□□□□ -1.72
CHD1YER164W RSC1P53236 928 aa4.34□□□□□ -1.72
CHD1YER164W YDR306CQ06640 478 aa4.34□□□□□ -1.72
CHD1YER164W YPR204WQ08995 1032 aa4.34□□□□□ -1.72
CHD1YER164W RSF2P46974 1380 aa4.34□□□□□ -1.72
CHD1YER164W TPM1P17536 199 aaKnown RBP4.33□□□□□ -1.72
CHD1YER164W CWC22P53333 577 aaKnown RBP4.33□□□□□ -1.72
CHD1YER164W FOX2Q02207 900 aaKnown RBP4.33□□□□□ -1.72
CHD1YER164W SWI1P09547 1314 aa4.33□□□□□ -1.72
CHD1YER164W UGA3P26370 528 aa4.33□□□□□ -1.72
CHD1YER164W CLB5P30283 435 aa4.33□□□□□ -1.72
CHD1YER164W DLD1P32891 587 aa4.33□□□□□ -1.72
CHD1YER164W SLN1P39928 1220 aaPredicted RBP4.33□□□□□ -1.72
CHD1YER164W CTR9P89105 1077 aa4.33□□□□□ -1.72
CHD1YER164W MEC3Q02574 474 aa4.33□□□□□ -1.72
CHD1YER164W ARG8P18544 423 aa4.33□□□□□ -1.72
CHD1YER164W CDC11P32458 415 aa4.33□□□□□ -1.72
CHD1YER164W RAD26P40352 1085 aa4.33□□□□□ -1.72
CHD1YER164W PRP3Q03338 469 aaPredicted RBP4.33□□□□□ -1.72
CHD1YER164W YRF1-3P0CX14 1859 aa4.33□□□□□ -1.72
CHD1YER164W YRF1-7P0CX15 1859 aa4.33□□□□□ -1.72
CHD1YER164W YRF1-6P53819 1859 aa4.33□□□□□ -1.72
CHD1YER164W KTR3P38130 404 aaPredicted RBP4.32□□□□□ -1.72
CHD1YER164W SRS2P12954 1174 aa4.32□□□□□ -1.72
CHD1YER164W SER1P33330 395 aaKnown RBP4.32□□□□□ -1.72
CHD1YER164W ENT3P47160 408 aa4.32□□□□□ -1.72
CHD1YER164W BTN2P53286 410 aa4.32□□□□□ -1.72
CHD1YER164W HOS3Q02959 697 aaKnown RBP4.32□□□□□ -1.72
CHD1YER164W PKH1Q03407 766 aa4.32□□□□□ -1.72
CHD1YER164W VAS1P07806 1104 aaKnown RBP4.32□□□□□ -1.72
CHD1YER164W IMH1Q06704 911 aaKnown RBP4.32□□□□□ -1.72
CHD1YER164W NNF2P53253 936 aa4.31□□□□□ -1.72
CHD1YER164W MDM38Q08179 573 aa4.31□□□□□ -1.72
CHD1YER164W NOT3P06102 836 aaKnown RBP4.31□□□□□ -1.72
CHD1YER164W LTV1P34078 463 aa4.31□□□□□ -1.72
CHD1YER164W RPN11P43588 306 aaKnown RBP4.31□□□□□ -1.72
CHD1YER164W RUD3Q12234 484 aaKnown RBP4.31□□□□□ -1.72
CHD1YER164W NUG1P40010 520 aaKnown RBP4.31□□□□□ -1.72
CHD1YER164W MRPS35P53292 345 aa4.31□□□□□ -1.72
CHD1YER164W ARP5P53946 755 aa4.31□□□□□ -1.72
CHD1YER164W CYC8P14922 966 aa4.3□□□□□ -1.72
CHD1YER164W UBP12P39538 1254 aa4.3□□□□□ -1.72
CHD1YER164W NPA3P47122 385 aa4.3□□□□□ -1.72
CHD1YER164W GCR2Q01722 534 aa4.3□□□□□ -1.72
CHD1YER164W RMT2Q03305 412 aa4.3□□□□□ -1.72
CHD1YER164W RPN7Q06103 429 aaKnown RBP4.3□□□□□ -1.72
CHD1YER164W YKR075CP36155 307 aa4.3□□□□□ -1.72
CHD1YER164W CTF4Q01454 927 aa4.3□□□□□ -1.72
CHD1YER164W NOP53Q12080 455 aaKnown RBP4.3□□□□□ -1.72
CHD1YER164W EDE1P34216 1381 aa4.3□□□□□ -1.72
CHD1YER164W SES1P07284 462 aaKnown RBP4.3□□□□□ -1.72
CHD1YER164W CAF20P12962 161 aaKnown RBP4.3□□□□□ -1.72
CHD1YER164W ALO1P54783 526 aaKnown RBP4.3□□□□□ -1.72
CHD1YER164W OSW7P43611 510 aa4.3□□□□□ -1.72
CHD1YER164W TEA1P47988 759 aa4.3□□□□□ -1.72
CHD1YER164W DNM1P54861 757 aa4.3□□□□□ -1.72
CHD1YER164W CTI6Q08923 506 aa4.3□□□□□ -1.72
CHD1YER164W LSP1Q12230 341 aaKnown RBP4.3□□□□□ -1.72
CHD1YER164W TAF13P11747 167 aa4.29□□□□□ -1.72
CHD1YER164W CAJ1P39101 391 aa4.29□□□□□ -1.72
CHD1YER164W CST6P40535 587 aa4.29□□□□□ -1.72
CHD1YER164W CWH41P53008 833 aa4.29□□□□□ -1.72
CHD1YER164W UBP16Q02863 499 aa4.29□□□□□ -1.72
CHD1YER164W PGA3Q12746 312 aaKnown RBP4.29□□□□□ -1.72
CHD1YER164W RAD50P12753 1312 aa4.29□□□□□ -1.72
CHD1YER164W TRL1P09880 827 aaKnown RBP4.29□□□□□ -1.72
CHD1YER164W RNR2P09938 399 aaKnown RBP4.29□□□□□ -1.72
CHD1YER164W YIR014WP40570 242 aa4.29□□□□□ -1.72
CHD1YER164W VPS20Q04272 221 aa4.29□□□□□ -1.72
CHD1YER164W GCD7P32502 381 aaPredicted RBP4.29□□□□□ -1.72
CHD1YER164W GDT1P38301 280 aaPredicted RBP4.29□□□□□ -1.72
CHD1YER164W KRE33P53914 1056 aaKnown RBP4.28□□□□□ -1.72
CHD1YER164W RPN1P38764 993 aaKnown RBP4.28□□□□□ -1.72
CHD1YER164W SWE1P32944 819 aa4.28□□□□□ -1.72
CHD1YER164W LYS4P49367 693 aaPredicted RBP4.28□□□□□ -1.72
CHD1YER164W TSR3Q12094 313 aaKnown RBP4.28□□□□□ -1.72
CHD1YER164W NCB2Q92317 146 aa4.28□□□□□ -1.72
CHD1YER164W YMR147WP40218 223 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms