RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	EFT1	P32324	842 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	FES1	P38260	290 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	SUR2	P38992	349 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	PHB1	P40961	287 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	DPB4	Q04603	196 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	TAF13	P11747	167 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	CLB5	P30283	435 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	HSP78	P33416	811 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	VPS51	P36116	164 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	JNM1	P36224	373 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	SIP3	P38717	1229 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	RGA1	P39083	1007 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	FYV8	P46949	817 aa	Known RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	NNF1	P47149	201 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	ULP1	Q02724	621 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	VTA1	Q06263	330 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	ARL1	P38116	183 aa	Known RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	SUP35	P05453	685 aa	Known RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	MET18	P40469	1032 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	OPY2	Q06810	360 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	CDC16	P09798	840 aa		5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	STM1	P39015	273 aa	Known RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	TMA22	P47089	198 aa	Predicted RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	UTP5	Q04177	643 aa	Known RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	CFT2	Q12102	859 aa	Predicted RBP	5.03	□□□□□ -1.6
YDR261C-D	YDR261C-D	HEM3	P28789	327 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	GGA2	P38817	585 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	MTR4	P47047	1073 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	YPL225W	Q08971	146 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	RPC19	P28000	142 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	YNR021W	P53723	404 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	ATG17	Q06410	417 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	YME2	P32843	850 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	ARC19	P33204	171 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	EGD1	Q02642	157 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	GYP5	Q12344	894 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	NHA1	Q99271	985 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	SES1	P07284	462 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	ABP1	P15891	592 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	CPR5	P35176	225 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	MUM2	P38236	366 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	ATG14	P38270	344 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	RRP3	P38712	501 aa	Known RBP	5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	APC5	Q08683	685 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	IOC2	Q12072	812 aa		5.02	□□□□□ -1.61
YDR261C-D	YDR261C-D	YGR054W	P53235	642 aa	Known RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	IST1	P53843	298 aa	Predicted RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	BNI5	P53890	448 aa	Known RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	SUI3	P09064	285 aa	Known RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	YCR016W	P25617	290 aa	Known RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	GLG2	P47011	380 aa		5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	ILM1	P47155	203 aa		5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	MNP1	P53163	194 aa	Predicted RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	COG6	P53959	839 aa		5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	NOB1	Q08444	459 aa	Known RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	RBK1	P25332	333 aa		5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	VMA8	P32610	256 aa	Known RBP	5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	ISW1	P38144	1129 aa		5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	YOR389W	Q08912	624 aa		5.01	□□□□□ -1.61
YDR261C-D	YDR261C-D	HIR2	P32480	875 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	DBP9	Q06218	594 aa	Known RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	SEC39	Q12745	709 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	LSO2	Q3E772	92 aa	Known RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	HSP104	P31539	908 aa	Known RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	SNF7	P39929	240 aa	Known RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	RSM25	P40496	264 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	RAD9	P14737	1309 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	PTA1	Q01329	785 aa	Predicted RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	SAC3	P46674	1301 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	SPB1	P25582	841 aa	Predicted RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	VMA10	P48836	114 aa	Known RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	SXM1	Q04175	944 aa	Known RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	JIP5	Q06214	492 aa	Predicted RBP	5	□□□□□ -1.61
YDR261C-D	YDR261C-D	AOS1	Q06624	347 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	TCB1	Q12466	1186 aa		5	□□□□□ -1.61
YDR261C-D	YDR261C-D	SEN2	P16658	377 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	MSH3	P25336	1018 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	SRB4	P32569	687 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	BRN1	P38170	754 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	ESF1	Q06344	628 aa	Known RBP	4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	CLB4	P24871	460 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	NUF2	P33895	451 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	YEL1	P34225	687 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	RTG3	P38165	486 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	OLA1	P38219	394 aa	Known RBP	4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	SPC72	P39723	622 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	RSP5	P39940	809 aa	Known RBP	4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	BUD6	P41697	788 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	MDG1	P53885	366 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	RUP1	Q12242	671 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	FAR1	P21268	830 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	MSH1	P25846	959 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	YHR218W	P38899	603 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	SNX41	Q04053	625 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	LCB5	Q06147	687 aa	Known RBP	4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	MPC54	Q08550	464 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	CHS5	Q12114	671 aa	Known RBP	4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	NCB2	Q92317	146 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	SPS1	P08458	490 aa		4.99	□□□□□ -1.61
YDR261C-D	YDR261C-D	VMA2	P16140	517 aa	Known RBP	4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms