RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	TY1B-MR1	Q04214	1755 aa		4.28	□□□□□ -1.72
PSF1	YDR013W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.28	□□□□□ -1.72
PSF1	YDR013W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.28	□□□□□ -1.72
PSF1	YDR013W	TY1B-NL1	Q12112	1755 aa		4.28	□□□□□ -1.72
PSF1	YDR013W	TY1B-GR1	Q12141	1755 aa		4.28	□□□□□ -1.72
PSF1	YDR013W	TY1B-BL	Q12490	1755 aa		4.28	□□□□□ -1.72
PSF1	YDR013W	FPR3	P38911	411 aa	Known RBP	4.28	□□□□□ -1.72
PSF1	YDR013W	URN1	Q06525	465 aa	Known RBP	4.28	□□□□□ -1.72
PSF1	YDR013W	BUD3	P25558	1636 aa		4.28	□□□□□ -1.72
PSF1	YDR013W	GCN2	P15442	1659 aa		4.27	□□□□□ -1.73
PSF1	YDR013W	IQG1	Q12280	1495 aa		4.27	□□□□□ -1.73
PSF1	YDR013W	PDC1	P06169	563 aa	Known RBP	4.27	□□□□□ -1.73
PSF1	YDR013W	ESL2	P36168	1195 aa		4.27	□□□□□ -1.73
PSF1	YDR013W	RTF1	P53064	558 aa		4.27	□□□□□ -1.73
PSF1	YDR013W	KIP3	P53086	805 aa	Known RBP	4.27	□□□□□ -1.73
PSF1	YDR013W	YNL115C	P53925	644 aa		4.27	□□□□□ -1.73
PSF1	YDR013W	PDS5	Q04264	1277 aa		4.26	□□□□□ -1.73
PSF1	YDR013W	MET5	P47169	1442 aa		4.26	□□□□□ -1.73
PSF1	YDR013W	DRS2	P39524	1355 aa		4.26	□□□□□ -1.73
PSF1	YDR013W	PHM7	Q12252	991 aa		4.25	□□□□□ -1.73
PSF1	YDR013W	SPO14	P36126	1683 aa		4.25	□□□□□ -1.73
PSF1	YDR013W	PDR12	Q02785	1511 aa		4.24	□□□□□ -1.73
PSF1	YDR013W	KIP2	P28743	706 aa		4.23	□□□□□ -1.73
PSF1	YDR013W	MRT4	P33201	236 aa	Known RBP	4.23	□□□□□ -1.73
PSF1	YDR013W	VPS70	P47161	811 aa		4.23	□□□□□ -1.73
PSF1	YDR013W	DPH6	Q12429	685 aa		4.23	□□□□□ -1.73
PSF1	YDR013W	ROG3	P43602	733 aa		4.22	□□□□□ -1.73
PSF1	YDR013W	MRX12	P47084	519 aa		4.22	□□□□□ -1.73
PSF1	YDR013W	CCP1	P00431	361 aa		4.21	□□□□□ -1.74
PSF1	YDR013W	PSE1	P32337	1089 aa	Known RBP	4.21	□□□□□ -1.74
PSF1	YDR013W	IXR1	P33417	597 aa		4.21	□□□□□ -1.74
PSF1	YDR013W	LSC2	P53312	427 aa		4.21	□□□□□ -1.74
PSF1	YDR013W	UBP2	Q01476	1272 aa		4.21	□□□□□ -1.74
PSF1	YDR013W	YSP2	Q06681	1438 aa		4.21	□□□□□ -1.74
PSF1	YDR013W	SIT4	P20604	311 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	SPE2	P21182	396 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	CLB5	P30283	435 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	TY1A-MR1	Q04215	440 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	LTE1	P07866	1435 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	TRM3	Q07527	1436 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	RTC1	Q08281	1341 aa		4.2	□□□□□ -1.74
PSF1	YDR013W	RAV1	P47104	1357 aa		4.19	□□□□□ -1.74
PSF1	YDR013W	CHZ1	P40019	153 aa	Predicted RBP	4.19	□□□□□ -1.74
PSF1	YDR013W	AAD14	P42884	376 aa		4.19	□□□□□ -1.74
PSF1	YDR013W	NSG2	P53898	299 aa		4.19	□□□□□ -1.74
PSF1	YDR013W	TAF8	Q03750	510 aa		4.19	□□□□□ -1.74
PSF1	YDR013W	YOR093C	Q12275	1648 aa		4.18	□□□□□ -1.74
PSF1	YDR013W	DLD1	P32891	587 aa		4.18	□□□□□ -1.74
PSF1	YDR013W	CCT8	P47079	568 aa	Known RBP	4.18	□□□□□ -1.74
PSF1	YDR013W	YJR098C	P47139	656 aa		4.18	□□□□□ -1.74
PSF1	YDR013W	PAP2	P53632	584 aa	Known RBP	4.18	□□□□□ -1.74
PSF1	YDR013W	TCB1	Q12466	1186 aa		4.18	□□□□□ -1.74
PSF1	YDR013W	ARG82	P07250	355 aa		4.17	□□□□□ -1.74
PSF1	YDR013W	PRS1	P32895	427 aa	Known RBP	4.17	□□□□□ -1.74
PSF1	YDR013W	OSH7	P38755	437 aa		4.17	□□□□□ -1.74
PSF1	YDR013W	CDC45	Q08032	650 aa		4.17	□□□□□ -1.74
PSF1	YDR013W	IML1	P47170	1584 aa		4.17	□□□□□ -1.74
PSF1	YDR013W	YLR419W	Q06698	1435 aa	Known RBP	4.16	□□□□□ -1.74
PSF1	YDR013W	KAR2	P16474	682 aa	Known RBP	4.16	□□□□□ -1.74
PSF1	YDR013W	FUN12	P39730	1002 aa	Known RBP	4.16	□□□□□ -1.74
PSF1	YDR013W	JJJ3	P47138	172 aa		4.16	□□□□□ -1.74
PSF1	YDR013W	LYS5	P50113	272 aa		4.16	□□□□□ -1.74
PSF1	YDR013W	YRF1-1	P0CX20	1796 aa		4.15	□□□□□ -1.74
PSF1	YDR013W	YRF1-5	P0CX21	1796 aa		4.15	□□□□□ -1.74
PSF1	YDR013W	YRF1-8	P0CX22	1796 aa		4.15	□□□□□ -1.74
PSF1	YDR013W	VPS27	P40343	622 aa	Known RBP	4.15	□□□□□ -1.75
PSF1	YDR013W	YFL066C	P43538	392 aa		4.15	□□□□□ -1.75
PSF1	YDR013W	EAF7	P53911	425 aa	Known RBP	4.15	□□□□□ -1.75
PSF1	YDR013W	NIS1	P53939	407 aa		4.15	□□□□□ -1.75
PSF1	YDR013W	CAB1	Q04430	367 aa		4.15	□□□□□ -1.75
PSF1	YDR013W	YDL144C	Q07589	356 aa		4.15	□□□□□ -1.75
PSF1	YDR013W	THI72	Q08579	599 aa		4.15	□□□□□ -1.75
PSF1	YDR013W	YDL206W	Q12424	762 aa		4.15	□□□□□ -1.75
PSF1	YDR013W	CHC1	P22137	1653 aa	Known RBP	4.15	□□□□□ -1.75
PSF1	YDR013W	PDR5	P33302	1511 aa	Known RBP	4.15	□□□□□ -1.75
PSF1	YDR013W	DOP1	Q03921	1698 aa		4.14	□□□□□ -1.75
PSF1	YDR013W	IPL1	P38991	367 aa		4.14	□□□□□ -1.75
PSF1	YDR013W	RPA14	P50106	137 aa		4.14	□□□□□ -1.75
PSF1	YDR013W	YPR097W	Q06839	1073 aa		4.14	□□□□□ -1.75
PSF1	YDR013W	ALR1	Q08269	859 aa		4.14	□□□□□ -1.75
PSF1	YDR013W	CFT1	Q06632	1357 aa	Known RBP	4.14	□□□□□ -1.75
PSF1	YDR013W	RPP0	P05317	312 aa	Known RBP	4.13	□□□□□ -1.75
PSF1	YDR013W	SLY41	P22215	453 aa		4.13	□□□□□ -1.75
PSF1	YDR013W	RTR1	P40084	226 aa	Predicted RBP	4.13	□□□□□ -1.75
PSF1	YDR013W	VMR1	P38735	1592 aa		4.13	□□□□□ -1.75
PSF1	YDR013W	RAD2	P07276	1031 aa		4.12	□□□□□ -1.75
PSF1	YDR013W	RPC31	P17890	251 aa		4.12	□□□□□ -1.75
PSF1	YDR013W	TYS1	P36421	394 aa	Known RBP	4.12	□□□□□ -1.75
PSF1	YDR013W	YBL086C	P38177	466 aa		4.12	□□□□□ -1.75
PSF1	YDR013W	YAP3	P38749	330 aa		4.12	□□□□□ -1.75
PSF1	YDR013W	ALD4	P46367	519 aa	Known RBP	4.12	□□□□□ -1.75
PSF1	YDR013W	RIA1	P53893	1110 aa		4.12	□□□□□ -1.75
PSF1	YDR013W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.11	□□□□□ -1.75
PSF1	YDR013W	DNF2	Q12675	1612 aa		4.11	□□□□□ -1.75
PSF1	YDR013W	NUP188	P52593	1655 aa	Known RBP	4.11	□□□□□ -1.75
PSF1	YDR013W	ITT1	Q04638	464 aa		4.11	□□□□□ -1.75
PSF1	YDR013W	RAD9	P14737	1309 aa		4.11	□□□□□ -1.75
PSF1	YDR013W	SBP1	P10080	294 aa	Known RBP	4.1	□□□□□ -1.75
PSF1	YDR013W	PDI1	P17967	522 aa	Known RBP	4.1	□□□□□ -1.75
PSF1	YDR013W	YFR016C	P43597	1233 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms