RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C DAL1P32375 460 aa7.7□□□□□ -1.18
RRI1YDL216C NAM8Q00539 523 aaKnown RBP7.7□□□□□ -1.18
RRI1YDL216C UTR2P32623 467 aa7.69□□□□□ -1.18
RRI1YDL216C TGL4P36165 910 aa7.68□□□□□ -1.18
RRI1YDL216C SUB2Q07478 446 aaKnown RBP7.68□□□□□ -1.18
RRI1YDL216C KTR7P40504 517 aa7.67□□□□□ -1.18
RRI1YDL216C YFL034WP43564 1073 aa7.66□□□□□ -1.18
RRI1YDL216C SSN3P39073 555 aa7.65□□□□□ -1.18
RRI1YDL216C GAL2P13181 574 aa7.64□□□□□ -1.19
RRI1YDL216C TBS1P38114 1094 aa7.64□□□□□ -1.19
RRI1YDL216C HDA3Q06623 655 aa7.64□□□□□ -1.19
RRI1YDL216C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19not detected
RRI1YDL216C TSC13Q99190 310 aa7.64□□□□□ -1.19
RRI1YDL216C HAP4P14064 554 aa7.63□□□□□ -1.19
RRI1YDL216C PUP1P25043 261 aa7.63□□□□□ -1.19
RRI1YDL216C PHO87P25360 923 aa7.63□□□□□ -1.19
RRI1YDL216C MSN5P52918 1224 aa7.63□□□□□ -1.19
RRI1YDL216C AIM9P40053 627 aaKnown RBP7.62□□□□□ -1.19
RRI1YDL216C UTP7P40055 554 aaKnown RBP7.62□□□□□ -1.19
RRI1YDL216C LYS5P50113 272 aa7.62□□□□□ -1.19
RRI1YDL216C DPH6Q12429 685 aa7.62□□□□□ -1.19
RRI1YDL216C SSA1P10591 642 aaKnown RBP7.61□□□□□ -1.19
RRI1YDL216C SLA1P32790 1244 aa7.61□□□□□ -1.19
RRI1YDL216C SLX8P40072 274 aa7.61□□□□□ -1.19
RRI1YDL216C ECM23Q02710 187 aa7.6□□□□□ -1.19
RRI1YDL216C NOB1Q08444 459 aaKnown RBP7.6□□□□□ -1.19
RRI1YDL216C PDI1P17967 522 aaKnown RBP7.59□□□□□ -1.19
RRI1YDL216C SUM1P46676 1062 aa7.59□□□□□ -1.19
RRI1YDL216C CUZ1P53899 274 aa7.59□□□□□ -1.19
RRI1YDL216C GAS4Q08271 471 aa7.59□□□□□ -1.19
RRI1YDL216C TY1A-DR3Q12441 440 aa7.59□□□□□ -1.19
RRI1YDL216C UBP15P50101 1230 aa7.58□□□□□ -1.2
RRI1YDL216C ACS2P52910 683 aaKnown RBP7.58□□□□□ -1.2
RRI1YDL216C AHP1P38013 176 aaKnown RBP7.56□□□□□ -1.2
RRI1YDL216C JJJ3P47138 172 aa7.56□□□□□ -1.2
RRI1YDL216C NTH2P35172 780 aa7.55□□□□□ -1.2
RRI1YDL216C UBX7P38349 436 aa7.55□□□□□ -1.2
RRI1YDL216C ALA1P40825 983 aaKnown RBP7.55□□□□□ -1.2
RRI1YDL216C SWI5P08153 709 aa7.54□□□□□ -1.2
RRI1YDL216C RPS6AP0CX37 236 aaKnown RBP7.54□□□□□ -1.2
RRI1YDL216C RPS6BP0CX38 236 aaPredicted RBP7.54□□□□□ -1.2
RRI1YDL216C RPL34AP87262 121 aaPredicted RBP7.54□□□□□ -1.2
RRI1YDL216C YML083CQ04526 418 aa7.54□□□□□ -1.2
RRI1YDL216C CEM1P39525 442 aa7.53□□□□□ -1.2
RRI1YDL216C ROM1P53046 1155 aa7.53□□□□□ -1.2
RRI1YDL216C DIT1P21623 536 aa7.52□□□□□ -1.2
RRI1YDL216C GEF1P37020 779 aa7.52□□□□□ -1.2
RRI1YDL216C JJJ2P46997 583 aa7.52□□□□□ -1.2
RRI1YDL216C YMR265CQ03508 461 aaKnown RBP7.52□□□□□ -1.2
RRI1YDL216C CYT1P07143 309 aa7.52□□□□□ -1.21
RRI1YDL216C VAN1P23642 535 aa7.52□□□□□ -1.21
RRI1YDL216C MTC5Q03897 1148 aa7.52□□□□□ -1.21
RRI1YDL216C PUF6Q04373 656 aaKnown RBP7.52□□□□□ -1.21
RRI1YDL216C UBP1P25037 809 aa7.51□□□□□ -1.21
RRI1YDL216C IRE1P32361 1115 aa7.51□□□□□ -1.21
RRI1YDL216C SHM1P37292 490 aaPredicted RBP7.51□□□□□ -1.21
RRI1YDL216C YPQ2Q06328 317 aa7.5□□□□□ -1.21
RRI1YDL216C TRS33Q99394 268 aa7.5□□□□□ -1.21
RRI1YDL216C ICP55P40051 511 aa7.49□□□□□ -1.21
RRI1YDL216C KRE33P53914 1056 aaKnown RBP7.49□□□□□ -1.21
RRI1YDL216C SYT1Q06836 1226 aa7.49□□□□□ -1.21
RRI1YDL216C MCM1P11746 286 aa7.47□□□□□ -1.21
RRI1YDL216C MDJ1P35191 511 aa7.47□□□□□ -1.21
RRI1YDL216C CWH41P53008 833 aa7.47□□□□□ -1.21
RRI1YDL216C ADE12P80210 433 aaKnown RBP7.47□□□□□ -1.21
RRI1YDL216C YDR461C-AQ2V2P7 80 aa7.46□□□□□ -1.22
RRI1YDL216C NGR1P32831 672 aaKnown RBP7.45□□□□□ -1.22
RRI1YDL216C PSH1Q12161 406 aa7.45□□□□□ -1.22
RRI1YDL216C RPS31P05759 152 aaKnown RBP7.44□□□□□ -1.22
RRI1YDL216C PDC6P26263 563 aaKnown RBP7.44□□□□□ -1.22
RRI1YDL216C CWC15Q03772 175 aaKnown RBP7.44□□□□□ -1.22
RRI1YDL216C SRS2P12954 1174 aa7.43□□□□□ -1.22
RRI1YDL216C CDC3P32457 520 aaKnown RBP7.43□□□□□ -1.22
RRI1YDL216C PUN1Q06991 263 aa7.43□□□□□ -1.22
RRI1YDL216C PHM7Q12252 991 aa7.43□□□□□ -1.22
RRI1YDL216C AI1P03875 834 aa7.42□□□□□ -1.22
RRI1YDL216C THI72Q08579 599 aa7.42□□□□□ -1.22
RRI1YDL216C PUS1Q12211 544 aaKnown RBP7.42□□□□□ -1.22
RRI1YDL216C MRPL16P38064 232 aa7.41□□□□□ -1.22
RRI1YDL216C YFL066CP43538 392 aa7.41□□□□□ -1.22
RRI1YDL216C NSG2P53898 299 aa7.41□□□□□ -1.22
RRI1YDL216C YNL165WP53891 406 aa7.4□□□□□ -1.22
RRI1YDL216C SCD5P34758 872 aa7.39□□□□□ -1.23
RRI1YDL216C ALD4P46367 519 aaKnown RBP7.39□□□□□ -1.23
RRI1YDL216C PNP1Q05788 311 aa7.39□□□□□ -1.23
RRI1YDL216C FPS1P23900 669 aa7.38□□□□□ -1.23
RRI1YDL216C SUV3P32580 737 aa7.38□□□□□ -1.23
RRI1YDL216C STB3Q12427 513 aa7.38□□□□□ -1.23
RRI1YDL216C LEU1P07264 779 aaKnown RBP7.37□□□□□ -1.23
RRI1YDL216C UTP4Q06679 776 aaKnown RBP7.36□□□□□ -1.23
RRI1YDL216C TPS3P38426 1054 aaKnown RBP7.35□□□□□ -1.23
RRI1YDL216C HXT5P38695 592 aa7.35□□□□□ -1.23
RRI1YDL216C YTA6P40328 754 aa7.35□□□□□ -1.23
RRI1YDL216C SPR3P41901 512 aa7.35□□□□□ -1.23
RRI1YDL216C RRN6P32786 894 aa7.34□□□□□ -1.23
RRI1YDL216C ALD2P47771 506 aa7.34□□□□□ -1.23
RRI1YDL216C CAB1Q04430 367 aa7.34□□□□□ -1.23
RRI1YDL216C Q0182Q9ZZW1 134 aa7.34□□□□□ -1.23
RRI1YDL216C GPM1P00950 247 aaKnown RBP7.33□□□□□ -1.24
RRI1YDL216C FUR4P05316 633 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms