RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C YPR097WQ06839 1073 aa4.37□□□□□ -1.71
HHF1YBR009C ALR1Q08269 859 aa4.37□□□□□ -1.71
HHF1YBR009C MCM16Q12262 181 aa4.37□□□□□ -1.71
HHF1YBR009C CIT2P08679 460 aa4.36□□□□□ -1.71
HHF1YBR009C TSR4P25040 408 aa4.36□□□□□ -1.71
HHF1YBR009C SRP40P32583 406 aaPredicted RBP4.36□□□□□ -1.71
HHF1YBR009C FPR3P38911 411 aaKnown RBP4.36□□□□□ -1.71
HHF1YBR009C BOL3P39724 118 aa4.36□□□□□ -1.71
HHF1YBR009C IOC3P43596 787 aa4.36□□□□□ -1.71
HHF1YBR009C ALD3P54114 506 aa4.36□□□□□ -1.71
HHF1YBR009C NUT2Q06213 157 aa4.36□□□□□ -1.71
HHF1YBR009C ISF1P32488 338 aa4.35□□□□□ -1.71
HHF1YBR009C YKL091CP33324 310 aaKnown RBP4.35□□□□□ -1.71
HHF1YBR009C ALG12P53730 551 aa4.35□□□□□ -1.71
HHF1YBR009C NAF1P53919 492 aaKnown RBP4.35□□□□□ -1.71
HHF1YBR009C VPS72Q03388 795 aa4.35□□□□□ -1.71
HHF1YBR009C PNP1Q05788 311 aa4.35□□□□□ -1.71
HHF1YBR009C PUS5Q06244 254 aa4.35□□□□□ -1.71
HHF1YBR009C MNL2Q12205 849 aa4.35□□□□□ -1.71
HHF1YBR009C FRT1Q99332 602 aa4.35□□□□□ -1.71
HHF1YBR009C TPD3P31383 635 aa4.34□□□□□ -1.71
HHF1YBR009C MET4P32389 672 aa4.34□□□□□ -1.71
HHF1YBR009C RRD1P40454 393 aaKnown RBP4.34□□□□□ -1.71
HHF1YBR009C FYV10P40492 516 aa4.34□□□□□ -1.71
HHF1YBR009C OSW7P43611 510 aa4.34□□□□□ -1.71
HHF1YBR009C ALD6P54115 500 aaKnown RBP4.34□□□□□ -1.71
HHF1YBR009C PUF6Q04373 656 aaKnown RBP4.34□□□□□ -1.71
HHF1YBR009C ENV9Q08651 330 aa4.34□□□□□ -1.71
HHF1YBR009C GLO3P38682 493 aaKnown RBP4.33□□□□□ -1.72
HHF1YBR009C QDR1P40475 563 aa4.33□□□□□ -1.72
HHF1YBR009C BUD21Q08492 214 aaPredicted RBP4.33□□□□□ -1.72
HHF1YBR009C PHO87P25360 923 aa4.32□□□□□ -1.72
HHF1YBR009C EMP47P43555 445 aa4.32□□□□□ -1.72
HHF1YBR009C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
HHF1YBR009C TPO2P53283 614 aa4.32□□□□□ -1.72
HHF1YBR009C FUR4P05316 633 aaKnown RBP4.31□□□□□ -1.72
HHF1YBR009C ACF4P47129 309 aa4.31□□□□□ -1.72
HHF1YBR009C CLA4P48562 842 aa4.31□□□□□ -1.72
HHF1YBR009C ACS2P52910 683 aaKnown RBP4.31□□□□□ -1.72
HHF1YBR009C ROM1P53046 1155 aa4.31□□□□□ -1.72
HHF1YBR009C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72 RIP-Chip
HHF1YBR009C YPL062WQ02781 134 aa4.31□□□□□ -1.72
HHF1YBR009C VPS16Q03308 798 aa4.31□□□□□ -1.72
HHF1YBR009C NSE3Q05541 303 aa4.31□□□□□ -1.72
HHF1YBR009C PUN1Q06991 263 aa4.31□□□□□ -1.72
HHF1YBR009C SSB1P11484 613 aaKnown RBP4.3□□□□□ -1.72
HHF1YBR009C SRS2P12954 1174 aa4.3□□□□□ -1.72
HHF1YBR009C HAP4P14064 554 aa4.3□□□□□ -1.72
HHF1YBR009C KIP2P28743 706 aa4.3□□□□□ -1.72
HHF1YBR009C MCM2P29469 868 aa4.3□□□□□ -1.72
HHF1YBR009C SSB2P40150 613 aaKnown RBP4.3□□□□□ -1.72
HHF1YBR009C MAD1P40957 749 aa4.3□□□□□ -1.72
HHF1YBR009C FIG4P42837 879 aa4.3□□□□□ -1.72
HHF1YBR009C SPR28Q04921 423 aa4.3□□□□□ -1.72
HHF1YBR009C SSF2Q12153 453 aaPredicted RBP4.3□□□□□ -1.72
HHF1YBR009C MIP1P15801 1254 aa4.29□□□□□ -1.72
HHF1YBR009C VAC17P25591 423 aa4.29□□□□□ -1.72
HHF1YBR009C AIR1P40507 360 aaKnown RBP4.29□□□□□ -1.72
HHF1YBR009C SYH1Q02875 849 aaKnown RBP4.29□□□□□ -1.72
HHF1YBR009C RPN4Q03465 531 aa4.29□□□□□ -1.72
HHF1YBR009C HED1Q03937 162 aa4.29□□□□□ -1.72
HHF1YBR009C POB3Q04636 552 aaKnown RBP4.29□□□□□ -1.72
HHF1YBR009C PIN2Q12057 282 aa4.29□□□□□ -1.72
HHF1YBR009C IXR1P33417 597 aa4.28□□□□□ -1.72
HHF1YBR009C PBP2P38151 413 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
HHF1YBR009C BUD6P41697 788 aa4.28□□□□□ -1.72
HHF1YBR009C YJL049WP47048 450 aa4.28□□□□□ -1.72
HHF1YBR009C WRS1Q12109 432 aaKnown RBP4.28□□□□□ -1.72
HHF1YBR009C STI1P15705 589 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
HHF1YBR009C TEC1P18412 486 aa4.27□□□□□ -1.73
HHF1YBR009C GRX4P32642 244 aa4.27□□□□□ -1.73
HHF1YBR009C TPM2P40414 161 aa4.27□□□□□ -1.73
HHF1YBR009C CDC53Q12018 815 aaKnown RBP4.27□□□□□ -1.73
HHF1YBR009C GIN4Q12263 1142 aa4.27□□□□□ -1.73
HHF1YBR009C RPT1P33299 467 aaKnown RBP4.26□□□□□ -1.73
HHF1YBR009C PMC1P38929 1173 aaPredicted RBP4.26□□□□□ -1.73
HHF1YBR009C GPI13Q07830 1017 aa4.26□□□□□ -1.73
HHF1YBR009C YOL057WQ08225 711 aa4.26□□□□□ -1.73
HHF1YBR009C GAS4Q08271 471 aa4.26□□□□□ -1.73
HHF1YBR009C PHO4P07270 312 aaKnown RBP4.25□□□□□ -1.73
HHF1YBR009C TRK1P12685 1235 aa4.25□□□□□ -1.73
HHF1YBR009C PDI1P17967 522 aaKnown RBP4.25□□□□□ -1.73
HHF1YBR009C CLN2P20438 545 aa4.25□□□□□ -1.73
HHF1YBR009C GUT2P32191 649 aa4.25□□□□□ -1.73
HHF1YBR009C PEP7P32609 515 aa4.25□□□□□ -1.73
HHF1YBR009C SOH1P38633 127 aa4.25□□□□□ -1.73
HHF1YBR009C MNN1P39106 762 aa4.25□□□□□ -1.73
HHF1YBR009C ATG3P40344 310 aa4.25□□□□□ -1.73
HHF1YBR009C YJR142WP47173 342 aa4.25□□□□□ -1.73
HHF1YBR009C STE20Q03497 939 aaKnown RBP4.25□□□□□ -1.73
HHF1YBR009C TRS120Q04183 1289 aa4.25□□□□□ -1.73
HHF1YBR009C YPR084WQ06821 456 aa4.25□□□□□ -1.73
HHF1YBR009C BDF2Q07442 638 aa4.25□□□□□ -1.73
HHF1YBR009C FRA1Q07825 749 aa4.25□□□□□ -1.73
HHF1YBR009C YOR131CQ12486 218 aa4.25□□□□□ -1.73
HHF1YBR009C YGR161W-CQ3E744 92 aa4.25□□□□□ -1.73
HHF1YBR009C LSO1Q3E827 93 aa4.25□□□□□ -1.73
HHF1YBR009C TSC13Q99190 310 aa4.25□□□□□ -1.73
HHF1YBR009C CDC4P07834 779 aa4.24□□□□□ -1.73
HHF1YBR009C VAN1P23642 535 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms