RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	DAL1	P32375	460 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	TTI1	P36097	1038 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	GEF1	P37020	779 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	AIM9	P40053	627 aa	Known RBP	3.74	□□□□□ -1.81
NCL1	YBL024W	ROG3	P43602	733 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	YGR035C	P53222	116 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	CDC19	P00549	500 aa	Known RBP	3.74	□□□□□ -1.81
NCL1	YBL024W	SSA4	P22202	642 aa	Known RBP	3.74	□□□□□ -1.81
NCL1	YBL024W	KTR7	P40504	517 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	SUM1	P46676	1062 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	MSN5	P52918	1224 aa		3.74	□□□□□ -1.81
NCL1	YBL024W	TY1A-MR1	Q04215	440 aa		3.73	□□□□□ -1.81
NCL1	YBL024W	RPS6A	P0CX37	236 aa	Known RBP	3.72	□□□□□ -1.81
NCL1	YBL024W	RPS6B	P0CX38	236 aa	Predicted RBP	3.72	□□□□□ -1.81
NCL1	YBL024W	PEP12	P32854	288 aa		3.72	□□□□□ -1.81
NCL1	YBL024W	UBP15	P50101	1230 aa		3.72	□□□□□ -1.81
NCL1	YBL024W	YML020W	Q03722	664 aa		3.72	□□□□□ -1.81
NCL1	YBL024W	TSC13	Q99190	310 aa		3.72	□□□□□ -1.81
NCL1	YBL024W	SWI5	P08153	709 aa		3.71	□□□□□ -1.82
NCL1	YBL024W	PDI1	P17967	522 aa	Known RBP	3.71	□□□□□ -1.82
NCL1	YBL024W	NTH2	P35172	780 aa		3.71	□□□□□ -1.82
NCL1	YBL024W	SSN3	P39073	555 aa		3.71	□□□□□ -1.82
NCL1	YBL024W	NOB1	Q08444	459 aa	Known RBP	3.71	□□□□□ -1.82
NCL1	YBL024W	PHO87	P25360	923 aa		3.71	□□□□□ -1.82
NCL1	YBL024W	HAP4	P14064	554 aa		3.7	□□□□□ -1.82
NCL1	YBL024W	JJJ2	P46997	583 aa		3.7	□□□□□ -1.82
NCL1	YBL024W	LYS5	P50113	272 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	NAM8	Q00539	523 aa	Known RBP	3.69	□□□□□ -1.82
NCL1	YBL024W	YMR265C	Q03508	461 aa	Known RBP	3.69	□□□□□ -1.82
NCL1	YBL024W	HPF1	Q05164	967 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	NOP8	Q08287	484 aa	Predicted RBP	3.69	□□□□□ -1.82
NCL1	YBL024W	CYT1	P07143	309 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	IRE1	P32361	1115 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	YTA6	P40328	754 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	YML083C	Q04526	418 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	GAS4	Q08271	471 aa		3.69	□□□□□ -1.82
NCL1	YBL024W	CCP1	P00431	361 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	MCM1	P11746	286 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	GAL2	P13181	574 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	PUP1	P25043	261 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	SLA1	P32790	1244 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	CEM1	P39525	442 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	DPH6	Q12429	685 aa		3.68	□□□□□ -1.82
NCL1	YBL024W	TRK2	P28584	889 aa		3.67	□□□□□ -1.82
NCL1	YBL024W	ACS2	P52910	683 aa	Known RBP	3.67	□□□□□ -1.82
NCL1	YBL024W	CUZ1	P53899	274 aa		3.67	□□□□□ -1.82
NCL1	YBL024W	TY1A-DR3	Q12441	440 aa		3.67	□□□□□ -1.82
NCL1	YBL024W	TGL4	P36165	910 aa		3.67	□□□□□ -1.82
NCL1	YBL024W	YPQ2	Q06328	317 aa		3.67	□□□□□ -1.82
NCL1	YBL024W	DIT1	P21623	536 aa		3.66	□□□□□ -1.82
NCL1	YBL024W	VAN1	P23642	535 aa		3.66	□□□□□ -1.82
NCL1	YBL024W	RPL34A	P87262	121 aa	Predicted RBP	3.66	□□□□□ -1.82
NCL1	YBL024W	ECM23	Q02710	187 aa		3.66	□□□□□ -1.82
NCL1	YBL024W	PDC6	P26263	563 aa	Known RBP	3.65	□□□□□ -1.83
NCL1	YBL024W	SHM1	P37292	490 aa	Predicted RBP	3.65	□□□□□ -1.83
NCL1	YBL024W	JJJ3	P47138	172 aa		3.65	□□□□□ -1.83
NCL1	YBL024W	CWH41	P53008	833 aa		3.65	□□□□□ -1.83
NCL1	YBL024W	KRE33	P53914	1056 aa	Known RBP	3.65	□□□□□ -1.83
NCL1	YBL024W	RGA2	Q06407	1009 aa		3.65	□□□□□ -1.83
NCL1	YBL024W	UBP1	P25037	809 aa		3.64	□□□□□ -1.83
NCL1	YBL024W	PSH1	Q12161	406 aa		3.64	□□□□□ -1.83
NCL1	YBL024W	TRS33	Q99394	268 aa		3.64	□□□□□ -1.83
NCL1	YBL024W	RPP1A	P05318	106 aa	Predicted RBP	3.64	□□□□□ -1.83
NCL1	YBL024W	ADE12	P80210	433 aa	Known RBP	3.64	□□□□□ -1.83
NCL1	YBL024W	STB3	Q12427	513 aa		3.64	□□□□□ -1.83
NCL1	YBL024W	YDR461C-A	Q2V2P7	80 aa		3.64	□□□□□ -1.83
NCL1	YBL024W	FPS1	P23900	669 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	CDC3	P32457	520 aa	Known RBP	3.63	□□□□□ -1.83
NCL1	YBL024W	UBX7	P38349	436 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	ROM1	P53046	1155 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	Q0182	Q9ZZW1	134 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	SCD5	P34758	872 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	MRPL16	P38064	232 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	SYT1	Q06836	1226 aa		3.63	□□□□□ -1.83
NCL1	YBL024W	MLF3	P32047	452 aa		3.62	□□□□□ -1.83
NCL1	YBL024W	RPS31	P05759	152 aa	Known RBP	3.61	□□□□□ -1.83
NCL1	YBL024W	LEU1	P07264	779 aa	Known RBP	3.61	□□□□□ -1.83
NCL1	YBL024W	NGR1	P32831	672 aa	Known RBP	3.61	□□□□□ -1.83
NCL1	YBL024W	YNL165W	P53891	406 aa		3.61	□□□□□ -1.83
NCL1	YBL024W	UTP4	Q06679	776 aa	Known RBP	3.61	□□□□□ -1.83
NCL1	YBL024W	AI1	P03875	834 aa		3.6	□□□□□ -1.83
NCL1	YBL024W	MTO1	P53070	669 aa		3.6	□□□□□ -1.83
NCL1	YBL024W	RGP1	P16664	663 aa		3.59	□□□□□ -1.83
NCL1	YBL024W	SSF1	P38789	453 aa	Predicted RBP	3.59	□□□□□ -1.83
NCL1	YBL024W	HAT1	Q12341	374 aa		3.59	□□□□□ -1.83
NCL1	YBL024W	ALD2	P47771	506 aa		3.59	□□□□□ -1.83
NCL1	YBL024W	PUF6	Q04373	656 aa	Known RBP	3.59	□□□□□ -1.83
NCL1	YBL024W	NSG2	P53898	299 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	FOX2	Q02207	900 aa	Known RBP	3.58	□□□□□ -1.84
NCL1	YBL024W	SEN54	Q02825	467 aa	Predicted RBP	3.58	□□□□□ -1.84
NCL1	YBL024W	PUN1	Q06991	263 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	PUS1	Q12211	544 aa	Known RBP	3.58	□□□□□ -1.84
NCL1	YBL024W	PHM7	Q12252	991 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	KAP122	P32767	1081 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	SLD2	P34252	453 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	HXT5	P38695	592 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	SPR3	P41901	512 aa		3.58	□□□□□ -1.84
NCL1	YBL024W	NCL1	P38205	684 aa	Known RBP	3.57	□□□□□ -1.84
NCL1	YBL024W	TPS3	P38426	1054 aa	Known RBP	3.57	□□□□□ -1.84
NCL1	YBL024W	THI72	Q08579	599 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms