RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C PKH1Q03407 766 aa16.53■□□□□ 0.24
SSA1YAL005C ILV3P39522 585 aaKnown RBP16.52■□□□□ 0.23
SSA1YAL005C BOI2P39969 1040 aa16.52■□□□□ 0.23
SSA1YAL005C PUF6Q04373 656 aaKnown RBP16.51■□□□□ 0.23
SSA1YAL005C SET1P38827 1080 aaKnown RBP16.49■□□□□ 0.23
SSA1YAL005C RAT1Q02792 1006 aaKnown RBP16.49■□□□□ 0.23
SSA1YAL005C YNG2P38806 282 aaKnown RBP16.49■□□□□ 0.23
SSA1YAL005C UBP12P39538 1254 aa16.47■□□□□ 0.23
SSA1YAL005C SPO1P53541 631 aa16.47■□□□□ 0.23
SSA1YAL005C ITC1P53125 1264 aa16.46■□□□□ 0.23
SSA1YAL005C HAT1Q12341 374 aa16.46■□□□□ 0.23
SSA1YAL005C SSK22P25390 1331 aaPredicted RBP16.44■□□□□ 0.22
SSA1YAL005C HXT10P43581 546 aa16.43■□□□□ 0.22
SSA1YAL005C PSH1Q12161 406 aa16.42■□□□□ 0.22
SSA1YAL005C LEO1P38439 464 aa16.41■□□□□ 0.22
SSA1YAL005C BDF2Q07442 638 aa16.41■□□□□ 0.22
SSA1YAL005C FPR3P38911 411 aaKnown RBP16.41■□□□□ 0.22
SSA1YAL005C EAF6P47128 113 aa16.41■□□□□ 0.22
SSA1YAL005C GCD7P32502 381 aaPredicted RBP16.39■□□□□ 0.21
SSA1YAL005C MSN5P52918 1224 aa16.39■□□□□ 0.21
SSA1YAL005C DIB1Q06819 143 aaPredicted RBP16.39■□□□□ 0.21
SSA1YAL005C PMD1P32634 1753 aa16.38■□□□□ 0.21
SSA1YAL005C CAF20P12962 161 aaKnown RBP16.37■□□□□ 0.21
SSA1YAL005C MTC5Q03897 1148 aa16.37■□□□□ 0.21
SSA1YAL005C PFF1P38244 976 aa16.36■□□□□ 0.21
SSA1YAL005C ERT1P38140 529 aa16.35■□□□□ 0.21
SSA1YAL005C SAC3P46674 1301 aa16.34■□□□□ 0.21
SSA1YAL005C UBP16Q02863 499 aa16.34■□□□□ 0.21
SSA1YAL005C SMY1P32364 656 aaKnown RBP16.33■□□□□ 0.21
SSA1YAL005C IRC3Q06683 689 aa16.33■□□□□ 0.21
SSA1YAL005C CWH41P53008 833 aa16.33■□□□□ 0.2
SSA1YAL005C SYF1Q04048 859 aaPredicted RBP16.33■□□□□ 0.2
SSA1YAL005C HGH1P48362 394 aaKnown RBP16.31■□□□□ 0.2
SSA1YAL005C YKL222CP35995 705 aa16.3■□□□□ 0.2
SSA1YAL005C KIN4Q01919 800 aa16.3■□□□□ 0.2
SSA1YAL005C FRD1P32614 470 aaKnown RBP16.29■□□□□ 0.2
SSA1YAL005C NMD2P38798 1089 aaKnown RBP16.29■□□□□ 0.2
SSA1YAL005C SIT4P20604 311 aa16.29■□□□□ 0.2
SSA1YAL005C SLA1P32790 1244 aa16.29■□□□□ 0.2
SSA1YAL005C SUP35P05453 685 aaKnown RBP16.28■□□□□ 0.2
SSA1YAL005C ERO1Q03103 563 aa16.28■□□□□ 0.2
SSA1YAL005C CTT1P06115 562 aa16.27■□□□□ 0.2
SSA1YAL005C RPN1P38764 993 aaKnown RBP16.27■□□□□ 0.2
SSA1YAL005C SNU66Q12420 587 aaPredicted RBP16.26■□□□□ 0.19
SSA1YAL005C SSF1P38789 453 aaPredicted RBP16.25■□□□□ 0.19
SSA1YAL005C SAS4Q04003 481 aa16.25■□□□□ 0.19
SSA1YAL005C NGR1P32831 672 aaKnown RBP16.24■□□□□ 0.19
SSA1YAL005C DPH6Q12429 685 aa16.24■□□□□ 0.19
SSA1YAL005C ICP55P40051 511 aa16.23■□□□□ 0.19
SSA1YAL005C THI3Q07471 609 aa16.23■□□□□ 0.19
SSA1YAL005C DMA1P38823 416 aa16.22■□□□□ 0.19
SSA1YAL005C GYP5Q12344 894 aa16.22■□□□□ 0.19
SSA1YAL005C YER156CP40093 338 aaKnown RBP16.21■□□□□ 0.19
SSA1YAL005C MGM1P32266 881 aa16.21■□□□□ 0.19
SSA1YAL005C ADR1P07248 1323 aa16.2■□□□□ 0.18
SSA1YAL005C AI2P03876 854 aa16.2■□□□□ 0.18
SSA1YAL005C SEC18P18759 758 aaKnown RBP16.2■□□□□ 0.18
SSA1YAL005C NCB2Q92317 146 aa16.2■□□□□ 0.18
SSA1YAL005C RFC1P38630 861 aaKnown RBP16.19■□□□□ 0.18
SSA1YAL005C BDP1P46678 594 aa16.19■□□□□ 0.18
SSA1YAL005C KTR3P38130 404 aaPredicted RBP16.19■□□□□ 0.18
SSA1YAL005C SPL2P38839 148 aa16.19■□□□□ 0.18
SSA1YAL005C NKP2Q06162 153 aa16.18■□□□□ 0.18
SSA1YAL005C KRE2P27809 442 aa16.16■□□□□ 0.18
SSA1YAL005C RPT4P53549 437 aaKnown RBP16.16■□□□□ 0.18
SSA1YAL005C SRC1Q03707 834 aa16.16■□□□□ 0.18
SSA1YAL005C RET1P22276 1149 aaKnown RBP16.15■□□□□ 0.18
SSA1YAL005C ICL1P28240 557 aaPredicted RBP16.15■□□□□ 0.18
SSA1YAL005C YGL242CP53066 181 aa16.15■□□□□ 0.18
SSA1YAL005C DUR1,2P32528 1835 aaKnown RBP16.15■□□□□ 0.18
SSA1YAL005C NOT3P06102 836 aaKnown RBP16.15■□□□□ 0.18
SSA1YAL005C CDC16P09798 840 aa16.14■□□□□ 0.17
SSA1YAL005C YNL193WP53870 558 aa16.14■□□□□ 0.17
SSA1YAL005C RPN7Q06103 429 aaKnown RBP16.14■□□□□ 0.17
SSA1YAL005C POM152P39685 1337 aa16.14■□□□□ 0.17
SSA1YAL005C SIS2P36024 562 aa16.13■□□□□ 0.17
SSA1YAL005C ECM21P38167 1117 aaKnown RBP16.13■□□□□ 0.17
SSA1YAL005C SET4P42948 560 aa16.13■□□□□ 0.17
SSA1YAL005C GRX6Q12438 231 aa16.13■□□□□ 0.17
SSA1YAL005C ALO1P54783 526 aaKnown RBP16.12■□□□□ 0.17
SSA1YAL005C ECM16Q04217 1267 aaKnown RBP16.12■□□□□ 0.17
SSA1YAL005C NOP2P40991 618 aaKnown RBP16.11■□□□□ 0.17
SSA1YAL005C PDR18P53756 1333 aa16.11■□□□□ 0.17
SSA1YAL005C YKU70P32807 602 aa16.11■□□□□ 0.17
SSA1YAL005C MLC1P53141 149 aa16.09■□□□□ 0.17
SSA1YAL005C HKR1P41809 1802 aa16.09■□□□□ 0.17
SSA1YAL005C FAS2P19097 1887 aaKnown RBP16.09■□□□□ 0.17
SSA1YAL005C GLO3P38682 493 aaKnown RBP16.09■□□□□ 0.17
SSA1YAL005C RMD1Q03441 430 aa16.09■□□□□ 0.17
SSA1YAL005C TOP1P04786 769 aa16.08■□□□□ 0.16
SSA1YAL005C SSA1P10591 642 aaKnown RBP16.08■□□□□ 0.16
SSA1YAL005C LCB1P25045 558 aaKnown RBP16.08■□□□□ 0.16
SSA1YAL005C HAL5P38970 855 aaKnown RBP16.08■□□□□ 0.16
SSA1YAL005C IRC4Q03036 179 aa16.08■□□□□ 0.16
SSA1YAL005C NUG1P40010 520 aaKnown RBP16.07■□□□□ 0.16
SSA1YAL005C FIG2P25653 1609 aa16.07■□□□□ 0.16
SSA1YAL005C RRI2Q12348 645 aa16.07■□□□□ 0.16
SSA1YAL005C RPC31P17890 251 aa16.06■□□□□ 0.16
SSA1YAL005C RAD50P12753 1312 aa16.05■□□□□ 0.16
SSA1YAL005C PIB2P53191 635 aa16.05■□□□□ 0.16
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms