RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
HIF1A-208ENST00000556237 KIF21BO75037 1637 aa10.04□□□□□ -0.8
HIF1A-208ENST00000556237 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
HIF1A-208ENST00000556237 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-208ENST00000556237 RBM33Q96EV2 1170 aaKnown RBP10.02□□□□□ -0.81
HIF1A-208ENST00000556237 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.81
HIF1A-208ENST00000556237 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
HIF1A-208ENST00000556237 DDX12PQ92771 950 aa10.01□□□□□ -0.81
HIF1A-208ENST00000556237 WBP1LQ9NX94 342 aa10.01□□□□□ -0.81
HIF1A-208ENST00000556237 WDR97A6NE52 1622 aa10□□□□□ -0.81
HIF1A-208ENST00000556237 GRIN2BQ13224 1484 aa9.99□□□□□ -0.81
HIF1A-208ENST00000556237 ERICH3Q5RHP9 1530 aa9.99□□□□□ -0.81
HIF1A-208ENST00000556237 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
HIF1A-208ENST00000556237 ABCA5Q8WWZ7 1642 aa9.99□□□□□ -0.81
HIF1A-208ENST00000556237 KCNC4Q03721 635 aa9.98□□□□□ -0.81
HIF1A-208ENST00000556237 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.98□□□□□ -0.81
HIF1A-208ENST00000556237 CEP162Q5TB80 1403 aa9.98□□□□□ -0.81
HIF1A-208ENST00000556237 EN1Q05925 392 aaPredicted RBP9.97□□□□□ -0.81
HIF1A-208ENST00000556237 NBR1Q14596 966 aa9.97□□□□□ -0.81
HIF1A-208ENST00000556237 LRCH3Q96II8 777 aa9.97□□□□□ -0.81
HIF1A-208ENST00000556237 CHMP7Q8WUX9 453 aaPredicted RBP9.96□□□□□ -0.82
HIF1A-208ENST00000556237 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
HIF1A-208ENST00000556237 FHAD1B1AJZ9 1412 aa9.96□□□□□ -0.82
HIF1A-208ENST00000556237 MAP3K7O43318 606 aa9.95□□□□□ -0.82
HIF1A-208ENST00000556237 PDIA6Q15084 440 aa9.95□□□□□ -0.82
HIF1A-208ENST00000556237 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
HIF1A-208ENST00000556237 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
HIF1A-208ENST00000556237 CUL7Q14999 1698 aa9.94□□□□□ -0.82
HIF1A-208ENST00000556237 CLIP1P30622 1438 aa9.94□□□□□ -0.82
HIF1A-208ENST00000556237 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
HIF1A-208ENST00000556237 TSR1Q2NL82 804 aaKnown RBP9.93□□□□□ -0.82
HIF1A-208ENST00000556237 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
HIF1A-208ENST00000556237 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
HIF1A-208ENST00000556237 SNAPC4Q5SXM2 1469 aa9.91□□□□□ -0.82
HIF1A-208ENST00000556237 PBRM1Q86U86 1689 aa9.91□□□□□ -0.82
HIF1A-208ENST00000556237 P3H3Q8IVL6 736 aa9.91□□□□□ -0.82
HIF1A-208ENST00000556237 VSIG10Q8N0Z9 540 aa9.91□□□□□ -0.82
HIF1A-208ENST00000556237 EIF4G3O43432 1585 aaKnown RBP9.91□□□□□ -0.82
HIF1A-208ENST00000556237 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
HIF1A-208ENST00000556237 PPP4CP60510 307 aa9.88□□□□□ -0.83
HIF1A-208ENST00000556237 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
HIF1A-208ENST00000556237 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
HIF1A-208ENST00000556237 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
HIF1A-208ENST00000556237 ADAMTS12P58397 1594 aa9.87□□□□□ -0.83
HIF1A-208ENST00000556237 PRSS12P56730 875 aa9.86□□□□□ -0.83
HIF1A-208ENST00000556237 Q6ZNB5 142 aa9.86□□□□□ -0.83
HIF1A-208ENST00000556237 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
HIF1A-208ENST00000556237 E2F4Q16254 413 aa9.85□□□□□ -0.83
HIF1A-208ENST00000556237 SMAPO00193 183 aa9.84□□□□□ -0.83
HIF1A-208ENST00000556237 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
HIF1A-208ENST00000556237 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
HIF1A-208ENST00000556237 GRIN2AQ12879 1464 aa9.84□□□□□ -0.83
HIF1A-208ENST00000556237 ARHGAP35Q9NRY4 1499 aa9.84□□□□□ -0.83
HIF1A-208ENST00000556237 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
HIF1A-208ENST00000556237 FAM198AQ9UFP1 575 aa9.83□□□□□ -0.84
HIF1A-208ENST00000556237 GRXCR2A6NFK2 248 aa9.82□□□□□ -0.84
HIF1A-208ENST00000556237 WDR70Q9NW82 654 aa9.82□□□□□ -0.84
HIF1A-208ENST00000556237 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
HIF1A-208ENST00000556237 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
HIF1A-208ENST00000556237 VPS8Q8N3P4 1428 aa9.82□□□□□ -0.84
HIF1A-208ENST00000556237 ARAP1Q96P48 1450 aa9.81□□□□□ -0.84
HIF1A-208ENST00000556237 PRIM1P49642 420 aaKnown RBP9.81□□□□□ -0.84
HIF1A-208ENST00000556237 LAPTM4AQ15012 233 aa9.81□□□□□ -0.84
HIF1A-208ENST00000556237 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
HIF1A-208ENST00000556237 TATDN2Q93075 761 aa9.81□□□□□ -0.84
HIF1A-208ENST00000556237 PNMA3Q9UL41 463 aa9.81□□□□□ -0.84
HIF1A-208ENST00000556237 CTTNBP2Q8WZ74 1663 aa9.8□□□□□ -0.84
HIF1A-208ENST00000556237 TTBK1Q5TCY1 1321 aaPredicted RBP9.8□□□□□ -0.84
HIF1A-208ENST00000556237 C3orf80F5H4A9 247 aa9.78□□□□□ -0.84
HIF1A-208ENST00000556237 TRIM26Q12899 539 aaPredicted RBP9.78□□□□□ -0.84
HIF1A-208ENST00000556237 MTRQ99707 1265 aa9.78□□□□□ -0.84
HIF1A-208ENST00000556237 IL21Q9HBE4 155 aa9.78□□□□□ -0.84
HIF1A-208ENST00000556237 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
HIF1A-208ENST00000556237 FHOD3Q2V2M9 1422 aa9.78□□□□□ -0.84
HIF1A-208ENST00000556237 IQGAP2Q13576 1575 aa9.77□□□□□ -0.85
HIF1A-208ENST00000556237 NUP160Q12769 1436 aa9.77□□□□□ -0.85
HIF1A-208ENST00000556237 OSBPP22059 807 aa9.77□□□□□ -0.85
HIF1A-208ENST00000556237 HDGFP51858 240 aaKnown RBP9.77□□□□□ -0.85
HIF1A-208ENST00000556237 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
HIF1A-208ENST00000556237 PCGF6Q9BYE7 350 aa9.77□□□□□ -0.85
HIF1A-208ENST00000556237 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
HIF1A-208ENST00000556237 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
HIF1A-208ENST00000556237 EFCAB5A4FU69 1503 aa9.76□□□□□ -0.85
HIF1A-208ENST00000556237 CEP170Q5SW79 1584 aa9.75□□□□□ -0.85
HIF1A-208ENST00000556237 RNF40O75150 1001 aa9.75□□□□□ -0.85
HIF1A-208ENST00000556237 UGGT2Q9NYU1 1516 aa9.74□□□□□ -0.85
HIF1A-208ENST00000556237 GFRA3O60609 400 aa9.74□□□□□ -0.85
HIF1A-208ENST00000556237 NECTIN2Q92692 538 aa9.73□□□□□ -0.85
HIF1A-208ENST00000556237 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
HIF1A-208ENST00000556237 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
HIF1A-208ENST00000556237 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
HIF1A-208ENST00000556237 KANK4Q5T7N3 995 aaPredicted RBP9.72□□□□□ -0.85
HIF1A-208ENST00000556237 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
HIF1A-208ENST00000556237 CHD1O14646 1710 aa9.72□□□□□ -0.85
HIF1A-208ENST00000556237 APLP1P51693 650 aa9.71□□□□□ -0.86
HIF1A-208ENST00000556237 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
HIF1A-208ENST00000556237 SAMD9Q5K651 1589 aa9.71□□□□□ -0.86
HIF1A-208ENST00000556237 TTC13Q8NBP0 860 aa9.7□□□□□ -0.86
HIF1A-208ENST00000556237 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
HIF1A-208ENST00000556237 PRG4Q92954 1404 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms