RNA–Protein interactions for RNA: ENST00000525060.1

IFT46-203, Transcript of intraflagellar transport 46, humanhuman

TSL 5

Gene IFT46, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-203ENST00000525060 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
IFT46-203ENST00000525060 PTGDRQ13258 359 aa12.28□□□□□ -0.44
IFT46-203ENST00000525060 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
IFT46-203ENST00000525060 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
IFT46-203ENST00000525060 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.44
IFT46-203ENST00000525060 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
IFT46-203ENST00000525060 WDR62O43379 1518 aa12.27□□□□□ -0.45
IFT46-203ENST00000525060 NUDT18Q6ZVK8 323 aa12.26□□□□□ -0.45
IFT46-203ENST00000525060 WBP1LQ9NX94 342 aa12.26□□□□□ -0.45
IFT46-203ENST00000525060 NYAP1Q6ZVC0 841 aa12.25□□□□□ -0.45
IFT46-203ENST00000525060 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
IFT46-203ENST00000525060 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
IFT46-203ENST00000525060 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
IFT46-203ENST00000525060 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
IFT46-203ENST00000525060 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
IFT46-203ENST00000525060 WRNQ14191 1432 aaPredicted RBP eCLIP12.21□□□□□ -0.45
IFT46-203ENST00000525060 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
IFT46-203ENST00000525060 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
IFT46-203ENST00000525060 CUX1P39880 1505 aa12.2□□□□□ -0.46
IFT46-203ENST00000525060 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
IFT46-203ENST00000525060 ITGBL1O95965 494 aaPredicted RBP12.19□□□□□ -0.46
IFT46-203ENST00000525060 EYA1Q99502 592 aa12.19□□□□□ -0.46
IFT46-203ENST00000525060 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
IFT46-203ENST00000525060 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
IFT46-203ENST00000525060 FCHSD2O94868 740 aa12.17□□□□□ -0.46
IFT46-203ENST00000525060 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
IFT46-203ENST00000525060 SMYD5Q6GMV2 418 aa12.15□□□□□ -0.46
IFT46-203ENST00000525060 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
IFT46-203ENST00000525060 TOP2BQ02880 1626 aa12.15□□□□□ -0.47
IFT46-203ENST00000525060 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.47
IFT46-203ENST00000525060 GPR37O15354 613 aa12.14□□□□□ -0.47
IFT46-203ENST00000525060 PPP4CP60510 307 aa12.14□□□□□ -0.47
IFT46-203ENST00000525060 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
IFT46-203ENST00000525060 A0A0G2JS52 829 aa12.12□□□□□ -0.47
IFT46-203ENST00000525060 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
IFT46-203ENST00000525060 HIC1Q14526 733 aa12.11□□□□□ -0.47
IFT46-203ENST00000525060 RNF40O75150 1001 aa12.09□□□□□ -0.47
IFT46-203ENST00000525060 DNAJB2P25686 324 aa12.09□□□□□ -0.47
IFT46-203ENST00000525060 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
IFT46-203ENST00000525060 FAM161AQ3B820 660 aa12.09□□□□□ -0.47
IFT46-203ENST00000525060 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
IFT46-203ENST00000525060 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.47
IFT46-203ENST00000525060 SLF2Q8IX21 1173 aa12.08□□□□□ -0.48
IFT46-203ENST00000525060 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.48
IFT46-203ENST00000525060 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
IFT46-203ENST00000525060 APLP1P51693 650 aa12.06□□□□□ -0.48
IFT46-203ENST00000525060 KCNC4Q03721 635 aa12.06□□□□□ -0.48
IFT46-203ENST00000525060 SOGA1O94964 1423 aa12.05□□□□□ -0.48
IFT46-203ENST00000525060 RCCD1A6NED2 376 aa12.05□□□□□ -0.48
IFT46-203ENST00000525060 GNPATO15228 680 aa12.05□□□□□ -0.48
IFT46-203ENST00000525060 FECHP22830 423 aa12.04□□□□□ -0.48
IFT46-203ENST00000525060 PXYLP1Q8TE99 480 aa12.04□□□□□ -0.48
IFT46-203ENST00000525060 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
IFT46-203ENST00000525060 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
IFT46-203ENST00000525060 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
IFT46-203ENST00000525060 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
IFT46-203ENST00000525060 IFT140Q96RY7 1462 aa12.02□□□□□ -0.49
IFT46-203ENST00000525060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
IFT46-203ENST00000525060 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
IFT46-203ENST00000525060 MTRQ99707 1265 aa12.01□□□□□ -0.49
IFT46-203ENST00000525060 RGS20O76081 388 aa12□□□□□ -0.49
IFT46-203ENST00000525060 OATP04181 439 aa12□□□□□ -0.49
IFT46-203ENST00000525060 SLC4A3P48751 1232 aa12□□□□□ -0.49
IFT46-203ENST00000525060 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
IFT46-203ENST00000525060 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
IFT46-203ENST00000525060 EIF4G3O43432 1585 aaKnown RBP11.99□□□□□ -0.49
IFT46-203ENST00000525060 WDR97A6NE52 1622 aa11.98□□□□□ -0.49
IFT46-203ENST00000525060 IL21Q9HBE4 155 aa11.98□□□□□ -0.49
IFT46-203ENST00000525060 RUSC2Q8N2Y8 1516 aa11.97□□□□□ -0.49
IFT46-203ENST00000525060 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
IFT46-203ENST00000525060 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.49
IFT46-203ENST00000525060 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
IFT46-203ENST00000525060 PRR14Q9BWN1 585 aa11.94□□□□□ -0.5
IFT46-203ENST00000525060 SLC10A3P09131 477 aa11.93□□□□□ -0.5
IFT46-203ENST00000525060 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
IFT46-203ENST00000525060 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
IFT46-203ENST00000525060 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
IFT46-203ENST00000525060 GAPVD1Q14C86 1478 aa11.91□□□□□ -0.5
IFT46-203ENST00000525060 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
IFT46-203ENST00000525060 CFHP08603 1231 aa11.91□□□□□ -0.5
IFT46-203ENST00000525060 COPS2P61201 443 aa11.91□□□□□ -0.5
IFT46-203ENST00000525060 PHOX2BQ99453 314 aa11.91□□□□□ -0.5
IFT46-203ENST00000525060 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
IFT46-203ENST00000525060 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
IFT46-203ENST00000525060 ACTN4O43707 911 aaKnown RBP11.88□□□□□ -0.51
IFT46-203ENST00000525060 KMT5BQ4FZB7 885 aa11.88□□□□□ -0.51
IFT46-203ENST00000525060 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
IFT46-203ENST00000525060 NLRP7Q8WX94 980 aa11.87□□□□□ -0.51
IFT46-203ENST00000525060 ZPR1O75312 459 aa11.86□□□□□ -0.51
IFT46-203ENST00000525060 BLOC1S3Q6QNY0 202 aa11.86□□□□□ -0.51
IFT46-203ENST00000525060 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
IFT46-203ENST00000525060 GRIN2BQ13224 1484 aa11.85□□□□□ -0.51
IFT46-203ENST00000525060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
IFT46-203ENST00000525060 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
IFT46-203ENST00000525060 EEA1Q15075 1411 aa11.85□□□□□ -0.51
IFT46-203ENST00000525060 IGF1RP08069 1367 aa11.84□□□□□ -0.51
IFT46-203ENST00000525060 CHD1O14646 1710 aa11.84□□□□□ -0.51
IFT46-203ENST00000525060 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
IFT46-203ENST00000525060 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
IFT46-203ENST00000525060 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms