RNA–Protein interactions for RNA: ENST00000525060.1

IFT46-203, Transcript of intraflagellar transport 46, humanhuman

TSL 5

Gene IFT46, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-203ENST00000525060 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
IFT46-203ENST00000525060 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
IFT46-203ENST00000525060 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
IFT46-203ENST00000525060 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
IFT46-203ENST00000525060 FOXD1Q16676 465 aa23.92■■□□□ 1.42
IFT46-203ENST00000525060 PLPPR3Q6T4P5 718 aa23.36■■□□□ 1.33
IFT46-203ENST00000525060 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
IFT46-203ENST00000525060 ADRA2BP18089 450 aa22.58■■□□□ 1.21
IFT46-203ENST00000525060 PIAS4Q8N2W9 510 aaPredicted RBP22.43■■□□□ 1.18
IFT46-203ENST00000525060 MSH5O43196 834 aa22.23■■□□□ 1.15
IFT46-203ENST00000525060 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
IFT46-203ENST00000525060 MAPK8IP2Q13387 824 aaPredicted RBP20.62■□□□□ 0.89
IFT46-203ENST00000525060 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
IFT46-203ENST00000525060 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
IFT46-203ENST00000525060 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
IFT46-203ENST00000525060 CNKSR2Q8WXI2 1034 aa20.06■□□□□ 0.8
IFT46-203ENST00000525060 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
IFT46-203ENST00000525060 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
IFT46-203ENST00000525060 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
IFT46-203ENST00000525060 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
IFT46-203ENST00000525060 KCNA4P22459 653 aa19.54■□□□□ 0.72
IFT46-203ENST00000525060 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
IFT46-203ENST00000525060 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
IFT46-203ENST00000525060 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
IFT46-203ENST00000525060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
IFT46-203ENST00000525060 CACNB1Q02641 598 aaPredicted RBP18.81■□□□□ 0.6
IFT46-203ENST00000525060 C1QBPQ07021 282 aaKnown RBP18.75■□□□□ 0.59
IFT46-203ENST00000525060 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
IFT46-203ENST00000525060 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
IFT46-203ENST00000525060 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
IFT46-203ENST00000525060 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
IFT46-203ENST00000525060 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
IFT46-203ENST00000525060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
IFT46-203ENST00000525060 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
IFT46-203ENST00000525060 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
IFT46-203ENST00000525060 CAPN15O75808 1086 aa18.06■□□□□ 0.48
IFT46-203ENST00000525060 SAMD1Q6SPF0 538 aaPredicted RBP18.04■□□□□ 0.48
IFT46-203ENST00000525060 APLP2Q06481 763 aa18.02■□□□□ 0.48
IFT46-203ENST00000525060 ZBTB22O15209 634 aa18.01■□□□□ 0.47
IFT46-203ENST00000525060 DSG3P32926 999 aa17.94■□□□□ 0.46
IFT46-203ENST00000525060 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
IFT46-203ENST00000525060 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
IFT46-203ENST00000525060 ABCB7O75027 752 aa17.71■□□□□ 0.43
IFT46-203ENST00000525060 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
IFT46-203ENST00000525060 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
IFT46-203ENST00000525060 POLA2Q14181 598 aa17.48■□□□□ 0.39
IFT46-203ENST00000525060 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
IFT46-203ENST00000525060 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
IFT46-203ENST00000525060 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
IFT46-203ENST00000525060 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
IFT46-203ENST00000525060 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
IFT46-203ENST00000525060 FBLN2P98095 1184 aa16.89■□□□□ 0.29
IFT46-203ENST00000525060 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
IFT46-203ENST00000525060 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
IFT46-203ENST00000525060 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
IFT46-203ENST00000525060 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
IFT46-203ENST00000525060 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
IFT46-203ENST00000525060 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
IFT46-203ENST00000525060 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
IFT46-203ENST00000525060 POTEHQ6S545 545 aa16.58■□□□□ 0.24
IFT46-203ENST00000525060 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
IFT46-203ENST00000525060 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
IFT46-203ENST00000525060 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
IFT46-203ENST00000525060 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
IFT46-203ENST00000525060 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
IFT46-203ENST00000525060 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
IFT46-203ENST00000525060 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
IFT46-203ENST00000525060 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
IFT46-203ENST00000525060 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
IFT46-203ENST00000525060 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
IFT46-203ENST00000525060 PRR29P0C7W0 189 aa16■□□□□ 0.15
IFT46-203ENST00000525060 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
IFT46-203ENST00000525060 PROM2Q8N271 834 aa15.98■□□□□ 0.15
IFT46-203ENST00000525060 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
IFT46-203ENST00000525060 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
IFT46-203ENST00000525060 HAX1O00165 279 aa15.8■□□□□ 0.12
IFT46-203ENST00000525060 FKBP8Q14318 412 aa15.79■□□□□ 0.12
IFT46-203ENST00000525060 CREBZFQ9NS37 354 aa15.75■□□□□ 0.11
IFT46-203ENST00000525060 SP7Q8TDD2 431 aaPredicted RBP15.73■□□□□ 0.11
IFT46-203ENST00000525060 FARP1Q9Y4F1 1045 aaPredicted RBP15.71■□□□□ 0.11
IFT46-203ENST00000525060 C19orf67A6NJJ6 358 aa15.7■□□□□ 0.1
IFT46-203ENST00000525060 EVX2Q03828 476 aa15.7■□□□□ 0.1
IFT46-203ENST00000525060 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
IFT46-203ENST00000525060 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.08
IFT46-203ENST00000525060 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
IFT46-203ENST00000525060 MIER1Q8N108 512 aa15.38■□□□□ 0.05
IFT46-203ENST00000525060 GABBR2O75899 941 aa15.35■□□□□ 0.05
IFT46-203ENST00000525060 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
IFT46-203ENST00000525060 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
IFT46-203ENST00000525060 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
IFT46-203ENST00000525060 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
IFT46-203ENST00000525060 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
IFT46-203ENST00000525060 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
IFT46-203ENST00000525060 CLCN6P51797 869 aa15.23■□□□□ 0.03
IFT46-203ENST00000525060 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
IFT46-203ENST00000525060 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
IFT46-203ENST00000525060 PHF12Q96QT6 1004 aa15.18■□□□□ 0.02
IFT46-203ENST00000525060 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
IFT46-203ENST00000525060 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
IFT46-203ENST00000525060 NUBP1P53384 320 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms