RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-215ENST00000498517 PRSS12P56730 875 aa8.85□□□□□ -0.99
ARHGEF3-215ENST00000498517 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
ARHGEF3-215ENST00000498517 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
ARHGEF3-215ENST00000498517 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
ARHGEF3-215ENST00000498517 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
ARHGEF3-215ENST00000498517 WDR62O43379 1518 aa8.84□□□□□ -0.99
ARHGEF3-215ENST00000498517 HRCP23327 699 aa8.83□□□□□ -1
ARHGEF3-215ENST00000498517 SAMD7Q7Z3H4 446 aa8.83□□□□□ -1
ARHGEF3-215ENST00000498517 PACS2Q86VP3 889 aa8.83□□□□□ -1
ARHGEF3-215ENST00000498517 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
ARHGEF3-215ENST00000498517 NYAP1Q6ZVC0 841 aa8.82□□□□□ -1
ARHGEF3-215ENST00000498517 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
ARHGEF3-215ENST00000498517 THOC2Q8NI27 1593 aaKnown RBP8.82□□□□□ -1
ARHGEF3-215ENST00000498517 LOC105371045A0A1W2PR82 267 aa8.81□□□□□ -1
ARHGEF3-215ENST00000498517 KCNC4Q03721 635 aa8.81□□□□□ -1
ARHGEF3-215ENST00000498517 TATDN2Q93075 761 aa8.81□□□□□ -1
ARHGEF3-215ENST00000498517 NPDC1Q9NQX5 325 aaPredicted RBP8.81□□□□□ -1
ARHGEF3-215ENST00000498517 IFT140Q96RY7 1462 aa8.81□□□□□ -1
ARHGEF3-215ENST00000498517 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
ARHGEF3-215ENST00000498517 RUSC2Q8N2Y8 1516 aa8.8□□□□□ -1
ARHGEF3-215ENST00000498517 ABCA10Q8WWZ4 1543 aa8.8□□□□□ -1
ARHGEF3-215ENST00000498517 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
ARHGEF3-215ENST00000498517 PCGF6Q9BYE7 350 aa8.79□□□□□ -1
ARHGEF3-215ENST00000498517 PNMA3Q9UL41 463 aa8.79□□□□□ -1
ARHGEF3-215ENST00000498517 TJAP1Q5JTD0 557 aa8.78□□□□□ -1
ARHGEF3-215ENST00000498517 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
ARHGEF3-215ENST00000498517 TTC13Q8NBP0 860 aa8.78□□□□□ -1
ARHGEF3-215ENST00000498517 WDR70Q9NW82 654 aa8.78□□□□□ -1
ARHGEF3-215ENST00000498517 GAPVD1Q14C86 1478 aa8.77□□□□□ -1.01
ARHGEF3-215ENST00000498517 MLLT3P42568 568 aaPredicted RBP8.76□□□□□ -1.01
ARHGEF3-215ENST00000498517 PPP4CP60510 307 aa8.76□□□□□ -1.01
ARHGEF3-215ENST00000498517 PADI6Q6TGC4 694 aa8.76□□□□□ -1.01
ARHGEF3-215ENST00000498517 CERKQ8TCT0 537 aa8.76□□□□□ -1.01
ARHGEF3-215ENST00000498517 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
ARHGEF3-215ENST00000498517 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
ARHGEF3-215ENST00000498517 IGF1RP08069 1367 aa8.75□□□□□ -1.01
ARHGEF3-215ENST00000498517 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.01
ARHGEF3-215ENST00000498517 CARMIL1Q5VZK9 1371 aa8.74□□□□□ -1.01
ARHGEF3-215ENST00000498517 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
ARHGEF3-215ENST00000498517 MTRQ99707 1265 aa8.74□□□□□ -1.01
ARHGEF3-215ENST00000498517 LCE2BO14633 110 aa8.73□□□□□ -1.01
ARHGEF3-215ENST00000498517 APLP1P51693 650 aa8.73□□□□□ -1.01
ARHGEF3-215ENST00000498517 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
ARHGEF3-215ENST00000498517 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
ARHGEF3-215ENST00000498517 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
ARHGEF3-215ENST00000498517 KCNV2Q8TDN2 545 aa8.72□□□□□ -1.01
ARHGEF3-215ENST00000498517 GRIN2BQ13224 1484 aa8.71□□□□□ -1.01
ARHGEF3-215ENST00000498517 ERICH3Q5RHP9 1530 aa8.71□□□□□ -1.01
ARHGEF3-215ENST00000498517 TRIM26Q12899 539 aaPredicted RBP8.71□□□□□ -1.02
ARHGEF3-215ENST00000498517 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.02
ARHGEF3-215ENST00000498517 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
ARHGEF3-215ENST00000498517 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF3-215ENST00000498517 RNF40O75150 1001 aa8.7□□□□□ -1.02
ARHGEF3-215ENST00000498517 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
ARHGEF3-215ENST00000498517 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
ARHGEF3-215ENST00000498517 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
ARHGEF3-215ENST00000498517 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
ARHGEF3-215ENST00000498517 EYA1Q99502 592 aa8.69□□□□□ -1.02
ARHGEF3-215ENST00000498517 KIF21BO75037 1637 aa8.69□□□□□ -1.02
ARHGEF3-215ENST00000498517 CUL7Q14999 1698 aa8.69□□□□□ -1.02
ARHGEF3-215ENST00000498517 PBRM1Q86U86 1689 aa8.69□□□□□ -1.02
ARHGEF3-215ENST00000498517 PRXQ9BXM0 1461 aa8.68□□□□□ -1.02
ARHGEF3-215ENST00000498517 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
ARHGEF3-215ENST00000498517 EIF4G3O43432 1585 aaKnown RBP8.67□□□□□ -1.02
ARHGEF3-215ENST00000498517 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
ARHGEF3-215ENST00000498517 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
ARHGEF3-215ENST00000498517 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
ARHGEF3-215ENST00000498517 TNIKQ9UKE5 1360 aa8.66□□□□□ -1.02
ARHGEF3-215ENST00000498517 Q6ZNB5 142 aa8.65□□□□□ -1.02
ARHGEF3-215ENST00000498517 ARHGEF1Q92888 912 aaKnown RBP8.65□□□□□ -1.02
ARHGEF3-215ENST00000498517 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
ARHGEF3-215ENST00000498517 COPS2P61201 443 aa8.64□□□□□ -1.03
ARHGEF3-215ENST00000498517 PTGDRQ13258 359 aa8.64□□□□□ -1.03
ARHGEF3-215ENST00000498517 PRKD2Q9BZL6 878 aa8.64□□□□□ -1.03
ARHGEF3-215ENST00000498517 SNAPC4Q5SXM2 1469 aa8.64□□□□□ -1.03
ARHGEF3-215ENST00000498517 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
ARHGEF3-215ENST00000498517 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
ARHGEF3-215ENST00000498517 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
ARHGEF3-215ENST00000498517 ADGRG1Q9Y653 693 aa8.6□□□□□ -1.03
ARHGEF3-215ENST00000498517 ADAMTS12P58397 1594 aa8.6□□□□□ -1.03
ARHGEF3-215ENST00000498517 GFRA3O60609 400 aa8.59□□□□□ -1.03
ARHGEF3-215ENST00000498517 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
ARHGEF3-215ENST00000498517 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
ARHGEF3-215ENST00000498517 CEP162Q5TB80 1403 aa8.58□□□□□ -1.04
ARHGEF3-215ENST00000498517 HDGFP51858 240 aaKnown RBP8.58□□□□□ -1.04
ARHGEF3-215ENST00000498517 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
ARHGEF3-215ENST00000498517 CLIP1P30622 1438 aa8.57□□□□□ -1.04
ARHGEF3-215ENST00000498517 SEMA3EO15041 775 aa8.57□□□□□ -1.04
ARHGEF3-215ENST00000498517 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
ARHGEF3-215ENST00000498517 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
ARHGEF3-215ENST00000498517 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
ARHGEF3-215ENST00000498517 CTTNBP2Q8WZ74 1663 aa8.56□□□□□ -1.04
ARHGEF3-215ENST00000498517 TLL1O43897 1013 aa8.56□□□□□ -1.04
ARHGEF3-215ENST00000498517 ZPR1O75312 459 aa8.56□□□□□ -1.04
ARHGEF3-215ENST00000498517 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
ARHGEF3-215ENST00000498517 TMEM134Q9H6X4 195 aa8.56□□□□□ -1.04
ARHGEF3-215ENST00000498517 V9GY48 417 aaPredicted RBP8.55□□□□□ -1.04
ARHGEF3-215ENST00000498517 KIAA0586Q9BVV6 1533 aa8.54□□□□□ -1.04
ARHGEF3-215ENST00000498517 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
ARHGEF3-215ENST00000498517 NUTM2FA1L443 756 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms