RNA–Protein interactions for RNA: ENST00000497562.1

SCN7A-205, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 3

Gene SCN7A, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-205ENST00000497562 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
SCN7A-205ENST00000497562 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
SCN7A-205ENST00000497562 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
SCN7A-205ENST00000497562 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
SCN7A-205ENST00000497562 LRCH3Q96II8 777 aa11.55□□□□□ -0.56
SCN7A-205ENST00000497562 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
SCN7A-205ENST00000497562 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
SCN7A-205ENST00000497562 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
SCN7A-205ENST00000497562 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
SCN7A-205ENST00000497562 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
SCN7A-205ENST00000497562 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
SCN7A-205ENST00000497562 TATDN2Q93075 761 aa11.53□□□□□ -0.56
SCN7A-205ENST00000497562 NPDC1Q9NQX5 325 aaPredicted RBP11.53□□□□□ -0.56
SCN7A-205ENST00000497562 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
SCN7A-205ENST00000497562 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
SCN7A-205ENST00000497562 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
SCN7A-205ENST00000497562 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.57
SCN7A-205ENST00000497562 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
SCN7A-205ENST00000497562 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
SCN7A-205ENST00000497562 SAMD7Q7Z3H4 446 aa11.5□□□□□ -0.57
SCN7A-205ENST00000497562 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
SCN7A-205ENST00000497562 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
SCN7A-205ENST00000497562 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
SCN7A-205ENST00000497562 PADI6Q6TGC4 694 aa11.48□□□□□ -0.57
SCN7A-205ENST00000497562 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
SCN7A-205ENST00000497562 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
SCN7A-205ENST00000497562 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
SCN7A-205ENST00000497562 PPP4CP60510 307 aa11.47□□□□□ -0.57
SCN7A-205ENST00000497562 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
SCN7A-205ENST00000497562 CUX1P39880 1505 aa11.46□□□□□ -0.57
SCN7A-205ENST00000497562 SOGA1O94964 1423 aa11.46□□□□□ -0.57
SCN7A-205ENST00000497562 A0A0G2JS52 829 aa11.46□□□□□ -0.57
SCN7A-205ENST00000497562 ARAP1Q96P48 1450 aa11.44□□□□□ -0.58
SCN7A-205ENST00000497562 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
SCN7A-205ENST00000497562 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
SCN7A-205ENST00000497562 SEMA3EO15041 775 aa11.43□□□□□ -0.58
SCN7A-205ENST00000497562 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
SCN7A-205ENST00000497562 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
SCN7A-205ENST00000497562 KCNC4Q03721 635 aa11.42□□□□□ -0.58
SCN7A-205ENST00000497562 PTGDRQ13258 359 aa11.41□□□□□ -0.58
SCN7A-205ENST00000497562 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
SCN7A-205ENST00000497562 NUTM2FA1L443 756 aa11.39□□□□□ -0.59
SCN7A-205ENST00000497562 RNF40O75150 1001 aa11.39□□□□□ -0.59
SCN7A-205ENST00000497562 RGS20O76081 388 aa11.39□□□□□ -0.59
SCN7A-205ENST00000497562 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
SCN7A-205ENST00000497562 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
SCN7A-205ENST00000497562 EYA1Q99502 592 aa11.38□□□□□ -0.59
SCN7A-205ENST00000497562 CLASP1Q7Z460 1538 aa11.38□□□□□ -0.59
SCN7A-205ENST00000497562 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
SCN7A-205ENST00000497562 SWT1Q5T5J6 900 aaKnown RBP11.37□□□□□ -0.59
SCN7A-205ENST00000497562 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
SCN7A-205ENST00000497562 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
SCN7A-205ENST00000497562 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
SCN7A-205ENST00000497562 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
SCN7A-205ENST00000497562 TJAP1Q5JTD0 557 aa11.33□□□□□ -0.6
SCN7A-205ENST00000497562 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
SCN7A-205ENST00000497562 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
SCN7A-205ENST00000497562 FCHSD2O94868 740 aa11.31□□□□□ -0.6
SCN7A-205ENST00000497562 APLP1P51693 650 aa11.31□□□□□ -0.6
SCN7A-205ENST00000497562 MTRQ99707 1265 aa11.31□□□□□ -0.6
SCN7A-205ENST00000497562 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
SCN7A-205ENST00000497562 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
SCN7A-205ENST00000497562 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
SCN7A-205ENST00000497562 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
SCN7A-205ENST00000497562 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
SCN7A-205ENST00000497562 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
SCN7A-205ENST00000497562 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
SCN7A-205ENST00000497562 DNAJB2P25686 324 aa11.28□□□□□ -0.6
SCN7A-205ENST00000497562 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
SCN7A-205ENST00000497562 RBM26Q5T8P6 1007 aaKnown RBP11.28□□□□□ -0.6
SCN7A-205ENST00000497562 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
SCN7A-205ENST00000497562 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.61
SCN7A-205ENST00000497562 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
SCN7A-205ENST00000497562 BIVM-ERCC5R4GMW8 1640 aa11.26□□□□□ -0.61
SCN7A-205ENST00000497562 GRIN2AQ12879 1464 aa11.25□□□□□ -0.61
SCN7A-205ENST00000497562 CEP170Q5SW79 1584 aa11.25□□□□□ -0.61
SCN7A-205ENST00000497562 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
SCN7A-205ENST00000497562 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
SCN7A-205ENST00000497562 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
SCN7A-205ENST00000497562 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
SCN7A-205ENST00000497562 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
SCN7A-205ENST00000497562 HIC1Q14526 733 aa11.23□□□□□ -0.61
SCN7A-205ENST00000497562 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
SCN7A-205ENST00000497562 COPS2P61201 443 aa11.22□□□□□ -0.61
SCN7A-205ENST00000497562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
SCN7A-205ENST00000497562 OATP04181 439 aa11.19□□□□□ -0.62
SCN7A-205ENST00000497562 PPP1R18Q6NYC8 613 aa11.19□□□□□ -0.62
SCN7A-205ENST00000497562 NKX2-3Q8TAU0 364 aa11.19□□□□□ -0.62
SCN7A-205ENST00000497562 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
SCN7A-205ENST00000497562 PRR14Q9BWN1 585 aa11.19□□□□□ -0.62
SCN7A-205ENST00000497562 GNPATO15228 680 aa11.18□□□□□ -0.62
SCN7A-205ENST00000497562 FECHP22830 423 aa11.18□□□□□ -0.62
SCN7A-205ENST00000497562 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
SCN7A-205ENST00000497562 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
SCN7A-205ENST00000497562 GPR37O15354 613 aa11.16□□□□□ -0.62
SCN7A-205ENST00000497562 NUP160Q12769 1436 aa11.16□□□□□ -0.62
SCN7A-205ENST00000497562 ERICH3Q5RHP9 1530 aa11.15□□□□□ -0.62
SCN7A-205ENST00000497562 ZPR1O75312 459 aa11.15□□□□□ -0.62
SCN7A-205ENST00000497562 METTL3Q86U44 580 aaKnown RBP11.15□□□□□ -0.62
SCN7A-205ENST00000497562 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms