RNA–Protein interactions for RNA: ENST00000497562.1

SCN7A-205, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 3

Gene SCN7A, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-205ENST00000497562 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
SCN7A-205ENST00000497562 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
SCN7A-205ENST00000497562 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
SCN7A-205ENST00000497562 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
SCN7A-205ENST00000497562 FOXD1Q16676 465 aa22.68■■□□□ 1.22
SCN7A-205ENST00000497562 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
SCN7A-205ENST00000497562 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
SCN7A-205ENST00000497562 ADRA2BP18089 450 aa21.35■■□□□ 1.01
SCN7A-205ENST00000497562 PIAS4Q8N2W9 510 aaPredicted RBP21.25■□□□□ 0.99
SCN7A-205ENST00000497562 MSH5O43196 834 aa21.12■□□□□ 0.97
SCN7A-205ENST00000497562 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
SCN7A-205ENST00000497562 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
SCN7A-205ENST00000497562 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
SCN7A-205ENST00000497562 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
SCN7A-205ENST00000497562 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
SCN7A-205ENST00000497562 CNKSR2Q8WXI2 1034 aa18.87■□□□□ 0.61
SCN7A-205ENST00000497562 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
SCN7A-205ENST00000497562 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
SCN7A-205ENST00000497562 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
SCN7A-205ENST00000497562 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
SCN7A-205ENST00000497562 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
SCN7A-205ENST00000497562 KCNA4P22459 653 aa18.21■□□□□ 0.51
SCN7A-205ENST00000497562 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
SCN7A-205ENST00000497562 CACNB1Q02641 598 aaPredicted RBP18.01■□□□□ 0.47
SCN7A-205ENST00000497562 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
SCN7A-205ENST00000497562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCN7A-205ENST00000497562 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
SCN7A-205ENST00000497562 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
SCN7A-205ENST00000497562 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
SCN7A-205ENST00000497562 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
SCN7A-205ENST00000497562 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
SCN7A-205ENST00000497562 CAPN15O75808 1086 aa17.15■□□□□ 0.34
SCN7A-205ENST00000497562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
SCN7A-205ENST00000497562 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
SCN7A-205ENST00000497562 APLP2Q06481 763 aa17■□□□□ 0.31
SCN7A-205ENST00000497562 DSG3P32926 999 aa16.99■□□□□ 0.31
SCN7A-205ENST00000497562 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
SCN7A-205ENST00000497562 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
SCN7A-205ENST00000497562 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
SCN7A-205ENST00000497562 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
SCN7A-205ENST00000497562 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
SCN7A-205ENST00000497562 ABCB7O75027 752 aa16.78■□□□□ 0.28
SCN7A-205ENST00000497562 ZBTB22O15209 634 aa16.75■□□□□ 0.27
SCN7A-205ENST00000497562 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
SCN7A-205ENST00000497562 POLA2Q14181 598 aa16.53■□□□□ 0.24
SCN7A-205ENST00000497562 ATXN8OSP0DMR3 200 aa16.36■□□□□ 0.21
SCN7A-205ENST00000497562 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
SCN7A-205ENST00000497562 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
SCN7A-205ENST00000497562 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
SCN7A-205ENST00000497562 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
SCN7A-205ENST00000497562 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
SCN7A-205ENST00000497562 POTEHQ6S545 545 aa15.92■□□□□ 0.14
SCN7A-205ENST00000497562 FBLN2P98095 1184 aa15.89■□□□□ 0.13
SCN7A-205ENST00000497562 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
SCN7A-205ENST00000497562 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
SCN7A-205ENST00000497562 NISCHQ9Y2I1 1504 aa15.75■□□□□ 0.11
SCN7A-205ENST00000497562 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
SCN7A-205ENST00000497562 REM2Q8IYK8 340 aaPredicted RBP15.74■□□□□ 0.11
SCN7A-205ENST00000497562 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
SCN7A-205ENST00000497562 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
SCN7A-205ENST00000497562 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
SCN7A-205ENST00000497562 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
SCN7A-205ENST00000497562 PITPNM1O00562 1244 aa15.56■□□□□ 0.08
SCN7A-205ENST00000497562 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
SCN7A-205ENST00000497562 PIP4P2Q8N4L2 257 aa15.44■□□□□ 0.06
SCN7A-205ENST00000497562 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCN7A-205ENST00000497562 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
SCN7A-205ENST00000497562 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
SCN7A-205ENST00000497562 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCN7A-205ENST00000497562 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
SCN7A-205ENST00000497562 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
SCN7A-205ENST00000497562 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
SCN7A-205ENST00000497562 HAX1O00165 279 aa15.11■□□□□ 0.01
SCN7A-205ENST00000497562 CHADLQ6NUI6 762 aa15.06■□□□□ 0
SCN7A-205ENST00000497562 SP7Q8TDD2 431 aaPredicted RBP15.02■□□□□ -0
SCN7A-205ENST00000497562 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
SCN7A-205ENST00000497562 EVX2Q03828 476 aa14.94□□□□□ -0.02
SCN7A-205ENST00000497562 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
SCN7A-205ENST00000497562 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
SCN7A-205ENST00000497562 PROM2Q8N271 834 aa14.82□□□□□ -0.04
SCN7A-205ENST00000497562 CREBZFQ9NS37 354 aa14.81□□□□□ -0.04
SCN7A-205ENST00000497562 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
SCN7A-205ENST00000497562 FKBP8Q14318 412 aa14.66□□□□□ -0.06
SCN7A-205ENST00000497562 GABBR2O75899 941 aa14.62□□□□□ -0.07
SCN7A-205ENST00000497562 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
SCN7A-205ENST00000497562 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
SCN7A-205ENST00000497562 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
SCN7A-205ENST00000497562 MIER1Q8N108 512 aa14.48□□□□□ -0.09
SCN7A-205ENST00000497562 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
SCN7A-205ENST00000497562 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
SCN7A-205ENST00000497562 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
SCN7A-205ENST00000497562 CLCN6P51797 869 aa14.42□□□□□ -0.1
SCN7A-205ENST00000497562 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
SCN7A-205ENST00000497562 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
SCN7A-205ENST00000497562 ABCC9O60706 1549 aa14.31□□□□□ -0.12
SCN7A-205ENST00000497562 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
SCN7A-205ENST00000497562 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
SCN7A-205ENST00000497562 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
SCN7A-205ENST00000497562 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
SCN7A-205ENST00000497562 DCBLD2Q96PD2 775 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms