RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
PKNOX1-205ENST00000474336 ZNF608Q9ULD9 1512 aaPredicted RBP12.3□□□□□ -0.44
PKNOX1-205ENST00000474336 PPP4CP60510 307 aa12.29□□□□□ -0.44
PKNOX1-205ENST00000474336 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
PKNOX1-205ENST00000474336 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
PKNOX1-205ENST00000474336 ERICH3Q5RHP9 1530 aa12.28□□□□□ -0.44
PKNOX1-205ENST00000474336 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-205ENST00000474336 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
PKNOX1-205ENST00000474336 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
PKNOX1-205ENST00000474336 MAP3K7O43318 606 aa12.26□□□□□ -0.45
PKNOX1-205ENST00000474336 NBR1Q14596 966 aa12.26□□□□□ -0.45
PKNOX1-205ENST00000474336 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-205ENST00000474336 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
PKNOX1-205ENST00000474336 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
PKNOX1-205ENST00000474336 GFRA3O60609 400 aa12.24□□□□□ -0.45
PKNOX1-205ENST00000474336 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
PKNOX1-205ENST00000474336 RAPGEF2Q9Y4G8 1499 aa12.24□□□□□ -0.45
PKNOX1-205ENST00000474336 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
PKNOX1-205ENST00000474336 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
PKNOX1-205ENST00000474336 PDIA6Q15084 440 aa12.22□□□□□ -0.45
PKNOX1-205ENST00000474336 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.45
PKNOX1-205ENST00000474336 IGF1RP08069 1367 aa12.21□□□□□ -0.45
PKNOX1-205ENST00000474336 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
PKNOX1-205ENST00000474336 SAMD7Q7Z3H4 446 aa12.21□□□□□ -0.45
PKNOX1-205ENST00000474336 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.45
PKNOX1-205ENST00000474336 CARMIL1Q5VZK9 1371 aa12.2□□□□□ -0.46
PKNOX1-205ENST00000474336 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-205ENST00000474336 UBTFP17480 764 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-205ENST00000474336 PRSS12P56730 875 aa12.2□□□□□ -0.46
PKNOX1-205ENST00000474336 CHD1O14646 1710 aa12.2□□□□□ -0.46
PKNOX1-205ENST00000474336 SMAPO00193 183 aa12.19□□□□□ -0.46
PKNOX1-205ENST00000474336 LCE2BO14633 110 aa12.18□□□□□ -0.46
PKNOX1-205ENST00000474336 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
PKNOX1-205ENST00000474336 PRKD2Q9BZL6 878 aa12.18□□□□□ -0.46
PKNOX1-205ENST00000474336 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
PKNOX1-205ENST00000474336 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
PKNOX1-205ENST00000474336 MTRQ99707 1265 aa12.17□□□□□ -0.46
PKNOX1-205ENST00000474336 FAM198AQ9UFP1 575 aa12.16□□□□□ -0.46
PKNOX1-205ENST00000474336 FHAD1B1AJZ9 1412 aa12.15□□□□□ -0.46
PKNOX1-205ENST00000474336 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
PKNOX1-205ENST00000474336 TATDN2Q93075 761 aa12.15□□□□□ -0.46
PKNOX1-205ENST00000474336 NBPF26B4DH59 902 aa12.14□□□□□ -0.47
PKNOX1-205ENST00000474336 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-205ENST00000474336 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-205ENST00000474336 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
PKNOX1-205ENST00000474336 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
PKNOX1-205ENST00000474336 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-205ENST00000474336 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
PKNOX1-205ENST00000474336 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
PKNOX1-205ENST00000474336 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
PKNOX1-205ENST00000474336 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
PKNOX1-205ENST00000474336 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
PKNOX1-205ENST00000474336 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-205ENST00000474336 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
PKNOX1-205ENST00000474336 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-205ENST00000474336 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
PKNOX1-205ENST00000474336 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
PKNOX1-205ENST00000474336 RNF40O75150 1001 aa12.07□□□□□ -0.48
PKNOX1-205ENST00000474336 IQGAP2Q13576 1575 aa12.07□□□□□ -0.48
PKNOX1-205ENST00000474336 NUDT18Q6ZVK8 323 aa12.07□□□□□ -0.48
PKNOX1-205ENST00000474336 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
PKNOX1-205ENST00000474336 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
PKNOX1-205ENST00000474336 APLP1P51693 650 aa12.06□□□□□ -0.48
PKNOX1-205ENST00000474336 E2F4Q16254 413 aa12.06□□□□□ -0.48
PKNOX1-205ENST00000474336 RBM27Q9P2N5 1060 aaKnown RBP12.06□□□□□ -0.48
PKNOX1-205ENST00000474336 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-205ENST00000474336 CLIP1P30622 1438 aa12.05□□□□□ -0.48
PKNOX1-205ENST00000474336 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
PKNOX1-205ENST00000474336 OSBPP22059 807 aa12.02□□□□□ -0.49
PKNOX1-205ENST00000474336 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
PKNOX1-205ENST00000474336 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
PKNOX1-205ENST00000474336 GGCXP38435 758 aa12.01□□□□□ -0.49
PKNOX1-205ENST00000474336 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
PKNOX1-205ENST00000474336 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
PKNOX1-205ENST00000474336 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
PKNOX1-205ENST00000474336 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
PKNOX1-205ENST00000474336 SAMD9Q5K651 1589 aa11.99□□□□□ -0.49
PKNOX1-205ENST00000474336 NUP160Q12769 1436 aa11.98□□□□□ -0.49
PKNOX1-205ENST00000474336 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
PKNOX1-205ENST00000474336 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
PKNOX1-205ENST00000474336 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
PKNOX1-205ENST00000474336 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
PKNOX1-205ENST00000474336 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
PKNOX1-205ENST00000474336 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
PKNOX1-205ENST00000474336 COPS2P61201 443 aa11.96□□□□□ -0.49
PKNOX1-205ENST00000474336 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
PKNOX1-205ENST00000474336 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
PKNOX1-205ENST00000474336 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
PKNOX1-205ENST00000474336 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
PKNOX1-205ENST00000474336 UGGT2Q9NYU1 1516 aa11.94□□□□□ -0.5
PKNOX1-205ENST00000474336 ZPR1O75312 459 aa11.93□□□□□ -0.5
PKNOX1-205ENST00000474336 PADI6Q6TGC4 694 aa11.93□□□□□ -0.5
PKNOX1-205ENST00000474336 NPDC1Q9NQX5 325 aaPredicted RBP11.93□□□□□ -0.5
PKNOX1-205ENST00000474336 FHOD3Q2V2M9 1422 aa11.93□□□□□ -0.5
PKNOX1-205ENST00000474336 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
PKNOX1-205ENST00000474336 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
PKNOX1-205ENST00000474336 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
PKNOX1-205ENST00000474336 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
PKNOX1-205ENST00000474336 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
PKNOX1-205ENST00000474336 PRR14Q9BWN1 585 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms