RNA–Protein interactions for RNA: ENST00000464198.5

CBWD1-210, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-210ENST00000464198 PNMA3Q9UL41 463 aa14.29□□□□□ -0.12
CBWD1-210ENST00000464198 PTGDRQ13258 359 aa14.28□□□□□ -0.12
CBWD1-210ENST00000464198 NUDT18Q6ZVK8 323 aa14.27□□□□□ -0.13
CBWD1-210ENST00000464198 LRCH3Q96II8 777 aa14.27□□□□□ -0.13
CBWD1-210ENST00000464198 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
CBWD1-210ENST00000464198 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.26□□□□□ -0.13
CBWD1-210ENST00000464198 WDR62O43379 1518 aa14.25□□□□□ -0.13
CBWD1-210ENST00000464198 NUTM2FA1L443 756 aa14.24□□□□□ -0.13
CBWD1-210ENST00000464198 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
CBWD1-210ENST00000464198 WBP1LQ9NX94 342 aa14.23□□□□□ -0.13
CBWD1-210ENST00000464198 CUX2O14529 1486 aa14.22□□□□□ -0.13
CBWD1-210ENST00000464198 SAMD7Q7Z3H4 446 aa14.21□□□□□ -0.13
CBWD1-210ENST00000464198 TSR3Q9UJK0 312 aaKnown RBP14.21□□□□□ -0.13
CBWD1-210ENST00000464198 HPS5Q9UPZ3 1129 aa14.21□□□□□ -0.13
CBWD1-210ENST00000464198 SMYD5Q6GMV2 418 aa14.2□□□□□ -0.14
CBWD1-210ENST00000464198 NYAP1Q6ZVC0 841 aa14.2□□□□□ -0.14
CBWD1-210ENST00000464198 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
CBWD1-210ENST00000464198 FCHSD2O94868 740 aa14.17□□□□□ -0.14
CBWD1-210ENST00000464198 EYA1Q99502 592 aa14.17□□□□□ -0.14
CBWD1-210ENST00000464198 IFFO2Q5TF58 517 aa14.16□□□□□ -0.14
CBWD1-210ENST00000464198 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
CBWD1-210ENST00000464198 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
CBWD1-210ENST00000464198 ADGRG1Q9Y653 693 aa14.13□□□□□ -0.15
CBWD1-210ENST00000464198 ITGBL1O95965 494 aaPredicted RBP14.12□□□□□ -0.15
CBWD1-210ENST00000464198 PPP4CP60510 307 aa14.12□□□□□ -0.15
CBWD1-210ENST00000464198 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
CBWD1-210ENST00000464198 CUX1P39880 1505 aa14.1□□□□□ -0.15
CBWD1-210ENST00000464198 GPR37O15354 613 aa14.1□□□□□ -0.15
CBWD1-210ENST00000464198 HDGFP51858 240 aaKnown RBP14.1□□□□□ -0.15
CBWD1-210ENST00000464198 HIC1Q14526 733 aa14.1□□□□□ -0.15
CBWD1-210ENST00000464198 SWT1Q5T5J6 900 aaKnown RBP14.1□□□□□ -0.15
CBWD1-210ENST00000464198 FAM161AQ3B820 660 aa14.08□□□□□ -0.16
CBWD1-210ENST00000464198 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
CBWD1-210ENST00000464198 RNF40O75150 1001 aa14.06□□□□□ -0.16
CBWD1-210ENST00000464198 DNAJB2P25686 324 aa14.05□□□□□ -0.16
CBWD1-210ENST00000464198 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
CBWD1-210ENST00000464198 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
CBWD1-210ENST00000464198 GNPATO15228 680 aa14.03□□□□□ -0.16
CBWD1-210ENST00000464198 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
CBWD1-210ENST00000464198 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
CBWD1-210ENST00000464198 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
CBWD1-210ENST00000464198 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
CBWD1-210ENST00000464198 A0A0G2JS52 829 aa14.02□□□□□ -0.17
CBWD1-210ENST00000464198 FECHP22830 423 aa14.02□□□□□ -0.17
CBWD1-210ENST00000464198 TMEM134Q9H6X4 195 aa14.02□□□□□ -0.17
CBWD1-210ENST00000464198 RCCD1A6NED2 376 aa14.01□□□□□ -0.17
CBWD1-210ENST00000464198 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 APLP1P51693 650 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 KCNC4Q03721 635 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 PXYLP1Q8TE99 480 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 NECTIN2Q92692 538 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 WDR97A6NE52 1622 aa14□□□□□ -0.17
CBWD1-210ENST00000464198 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
CBWD1-210ENST00000464198 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
CBWD1-210ENST00000464198 OATP04181 439 aa13.98□□□□□ -0.17
CBWD1-210ENST00000464198 SLC4A3P48751 1232 aa13.98□□□□□ -0.17
CBWD1-210ENST00000464198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
CBWD1-210ENST00000464198 TJAP1Q5JTD0 557 aa13.97□□□□□ -0.17
CBWD1-210ENST00000464198 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
CBWD1-210ENST00000464198 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
CBWD1-210ENST00000464198 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
CBWD1-210ENST00000464198 METTL3Q86U44 580 aaKnown RBP13.96□□□□□ -0.17
CBWD1-210ENST00000464198 MTRQ99707 1265 aa13.94□□□□□ -0.18
CBWD1-210ENST00000464198 TULP1O00294 542 aaPredicted RBP13.93□□□□□ -0.18
CBWD1-210ENST00000464198 SOGA1O94964 1423 aa13.92□□□□□ -0.18
CBWD1-210ENST00000464198 IL21Q9HBE4 155 aa13.91□□□□□ -0.18
CBWD1-210ENST00000464198 RGS20O76081 388 aa13.9□□□□□ -0.18
CBWD1-210ENST00000464198 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
CBWD1-210ENST00000464198 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
CBWD1-210ENST00000464198 PRR14Q9BWN1 585 aa13.88□□□□□ -0.19
CBWD1-210ENST00000464198 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
CBWD1-210ENST00000464198 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
CBWD1-210ENST00000464198 SLC10A3P09131 477 aa13.86□□□□□ -0.19
CBWD1-210ENST00000464198 ZNF516Q92618 1163 aa13.86□□□□□ -0.19
CBWD1-210ENST00000464198 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
CBWD1-210ENST00000464198 CHD1O14646 1710 aa13.84□□□□□ -0.19
CBWD1-210ENST00000464198 PHOX2BQ99453 314 aa13.84□□□□□ -0.19
CBWD1-210ENST00000464198 CFHP08603 1231 aa13.83□□□□□ -0.2
CBWD1-210ENST00000464198 COPS2P61201 443 aa13.83□□□□□ -0.2
CBWD1-210ENST00000464198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.83□□□□□ -0.2
CBWD1-210ENST00000464198 MAP2K5Q13163 448 aa13.82□□□□□ -0.2
CBWD1-210ENST00000464198 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
CBWD1-210ENST00000464198 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
CBWD1-210ENST00000464198 PCDHB3Q9Y5E6 796 aa13.82□□□□□ -0.2
CBWD1-210ENST00000464198 ACTN4O43707 911 aaKnown RBP13.81□□□□□ -0.2
CBWD1-210ENST00000464198 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
CBWD1-210ENST00000464198 BLOC1S3Q6QNY0 202 aa13.79□□□□□ -0.2
CBWD1-210ENST00000464198 GAPVD1Q14C86 1478 aa13.78□□□□□ -0.2
CBWD1-210ENST00000464198 ZPR1O75312 459 aa13.77□□□□□ -0.21
CBWD1-210ENST00000464198 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
CBWD1-210ENST00000464198 NKX2-3Q8TAU0 364 aa13.77□□□□□ -0.21
CBWD1-210ENST00000464198 IRF6O14896 467 aa13.76□□□□□ -0.21
CBWD1-210ENST00000464198 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
CBWD1-210ENST00000464198 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
CBWD1-210ENST00000464198 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
CBWD1-210ENST00000464198 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-210ENST00000464198 PPP1R18Q6NYC8 613 aa13.73□□□□□ -0.21
CBWD1-210ENST00000464198 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
CBWD1-210ENST00000464198 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms