RNA–Protein interactions for RNA: ENST00000464198.5

CBWD1-210, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-210ENST00000464198 AEBP2Q6ZN18 517 aaPredicted RBP35■■■■□ 3.19
CBWD1-210ENST00000464198 CHIC1Q5VXU3 224 aa33.68■■■□□ 2.98
CBWD1-210ENST00000464198 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
CBWD1-210ENST00000464198 PHF23Q9BUL5 403 aaPredicted RBP29.57■■■□□ 2.32
CBWD1-210ENST00000464198 FOXD1Q16676 465 aa27.69■■■□□ 2.02
CBWD1-210ENST00000464198 PLPPR3Q6T4P5 718 aa27.1■■□□□ 1.93
CBWD1-210ENST00000464198 PPP6R1Q9UPN7 881 aa26.25■■□□□ 1.79
CBWD1-210ENST00000464198 ADRA2BP18089 450 aa26.18■■□□□ 1.78
CBWD1-210ENST00000464198 PIAS4Q8N2W9 510 aaPredicted RBP25.97■■□□□ 1.75
CBWD1-210ENST00000464198 MSH5O43196 834 aa25.71■■□□□ 1.71
CBWD1-210ENST00000464198 POTEDQ86YR6 584 aa24.89■■□□□ 1.58
CBWD1-210ENST00000464198 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
CBWD1-210ENST00000464198 MAPK8IP2Q13387 824 aaPredicted RBP23.9■■□□□ 1.42
CBWD1-210ENST00000464198 PPP4R3CPQ6ZMV5 832 aa23.82■■□□□ 1.4
CBWD1-210ENST00000464198 DMRT2Q9Y5R5 561 aa23.68■■□□□ 1.38
CBWD1-210ENST00000464198 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
CBWD1-210ENST00000464198 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
CBWD1-210ENST00000464198 HOXD11P31277 338 aaPredicted RBP23■■□□□ 1.27
CBWD1-210ENST00000464198 RNF216Q9NWF9 866 aaPredicted RBP22.94■■□□□ 1.26
CBWD1-210ENST00000464198 NPM3O75607 178 aaKnown RBP22.72■■□□□ 1.23
CBWD1-210ENST00000464198 KCNA4P22459 653 aa22.69■■□□□ 1.22
CBWD1-210ENST00000464198 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
CBWD1-210ENST00000464198 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
CBWD1-210ENST00000464198 RNF39Q9H2S5 420 aa22.01■■□□□ 1.11
CBWD1-210ENST00000464198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
CBWD1-210ENST00000464198 CACNB1Q02641 598 aaPredicted RBP21.82■■□□□ 1.08
CBWD1-210ENST00000464198 C1QBPQ07021 282 aaKnown RBP21.7■■□□□ 1.06
CBWD1-210ENST00000464198 SLC4A2P04920 1241 aa21.59■■□□□ 1.05
CBWD1-210ENST00000464198 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
CBWD1-210ENST00000464198 U3KPZ7 1027 aaPredicted RBP21.5■■□□□ 1.03
CBWD1-210ENST00000464198 SPINK5Q9NQ38 1064 aaPredicted RBP21.04■□□□□ 0.96
CBWD1-210ENST00000464198 FOXD4L1Q9NU39 408 aa21.03■□□□□ 0.96
CBWD1-210ENST00000464198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
CBWD1-210ENST00000464198 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
CBWD1-210ENST00000464198 MYCNP04198 464 aaPredicted RBP20.99■□□□□ 0.95
CBWD1-210ENST00000464198 CAPN15O75808 1086 aa20.95■□□□□ 0.94
CBWD1-210ENST00000464198 SAMD1Q6SPF0 538 aaPredicted RBP20.93■□□□□ 0.94
CBWD1-210ENST00000464198 APLP2Q06481 763 aa20.91■□□□□ 0.94
CBWD1-210ENST00000464198 ZBTB22O15209 634 aa20.9■□□□□ 0.94
CBWD1-210ENST00000464198 DSG3P32926 999 aa20.76■□□□□ 0.91
CBWD1-210ENST00000464198 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
CBWD1-210ENST00000464198 ZNF219Q9P2Y4 722 aaPredicted RBP20.72■□□□□ 0.91
CBWD1-210ENST00000464198 ABCB7O75027 752 aa20.52■□□□□ 0.88
CBWD1-210ENST00000464198 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
CBWD1-210ENST00000464198 ATXN8OSP0DMR3 200 aa20.35■□□□□ 0.85
CBWD1-210ENST00000464198 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
CBWD1-210ENST00000464198 POLA2Q14181 598 aa20.29■□□□□ 0.84
CBWD1-210ENST00000464198 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
CBWD1-210ENST00000464198 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
CBWD1-210ENST00000464198 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
CBWD1-210ENST00000464198 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
CBWD1-210ENST00000464198 FBLN2P98095 1184 aa19.62■□□□□ 0.73
CBWD1-210ENST00000464198 MKRN4PQ13434 485 aaPredicted RBP19.58■□□□□ 0.72
CBWD1-210ENST00000464198 POTEHQ6S545 545 aa19.48■□□□□ 0.71
CBWD1-210ENST00000464198 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
CBWD1-210ENST00000464198 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
CBWD1-210ENST00000464198 SPDYE2BA6NHP3 402 aa19.35■□□□□ 0.69
CBWD1-210ENST00000464198 SPDYE6P0CI01 402 aa19.35■□□□□ 0.69
CBWD1-210ENST00000464198 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
CBWD1-210ENST00000464198 REM2Q8IYK8 340 aaPredicted RBP19.25■□□□□ 0.67
CBWD1-210ENST00000464198 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
CBWD1-210ENST00000464198 SSUH2Q9Y2M2 353 aa19.17■□□□□ 0.66
CBWD1-210ENST00000464198 CHRDL2Q6WN34 429 aa19.16■□□□□ 0.66
CBWD1-210ENST00000464198 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
CBWD1-210ENST00000464198 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
CBWD1-210ENST00000464198 SPDYE1Q8NFV5 336 aaPredicted RBP18.89■□□□□ 0.61
CBWD1-210ENST00000464198 SPDYE4A6NLX3 237 aa18.86■□□□□ 0.61
CBWD1-210ENST00000464198 PIP4P2Q8N4L2 257 aa18.82■□□□□ 0.6
CBWD1-210ENST00000464198 CLEC11AQ9Y240 323 aa18.81■□□□□ 0.6
CBWD1-210ENST00000464198 FXR2P51116 673 aaKnown RBP eCLIP18.79■□□□□ 0.6
CBWD1-210ENST00000464198 PRR29P0C7W0 189 aa18.57■□□□□ 0.56
CBWD1-210ENST00000464198 PRKAR2AP13861 404 aaKnown RBP18.54■□□□□ 0.56
CBWD1-210ENST00000464198 PROM2Q8N271 834 aa18.53■□□□□ 0.56
CBWD1-210ENST00000464198 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
CBWD1-210ENST00000464198 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
CBWD1-210ENST00000464198 FKBP8Q14318 412 aa18.39■□□□□ 0.53
CBWD1-210ENST00000464198 HAX1O00165 279 aa18.31■□□□□ 0.52
CBWD1-210ENST00000464198 CREBZFQ9NS37 354 aa18.26■□□□□ 0.51
CBWD1-210ENST00000464198 SP7Q8TDD2 431 aaPredicted RBP18.23■□□□□ 0.51
CBWD1-210ENST00000464198 FARP1Q9Y4F1 1045 aaPredicted RBP18.21■□□□□ 0.51
CBWD1-210ENST00000464198 C19orf67A6NJJ6 358 aa18.17■□□□□ 0.5
CBWD1-210ENST00000464198 EVX2Q03828 476 aa18.16■□□□□ 0.5
CBWD1-210ENST00000464198 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
CBWD1-210ENST00000464198 CD44P16070 742 aaKnown RBP17.98■□□□□ 0.47
CBWD1-210ENST00000464198 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
CBWD1-210ENST00000464198 MIER1Q8N108 512 aa17.91■□□□□ 0.46
CBWD1-210ENST00000464198 FBXO3Q9UK99 471 aa17.86■□□□□ 0.45
CBWD1-210ENST00000464198 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
CBWD1-210ENST00000464198 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.44
CBWD1-210ENST00000464198 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
CBWD1-210ENST00000464198 GABBR2O75899 941 aa17.77■□□□□ 0.44
CBWD1-210ENST00000464198 ZNF579Q8NAF0 562 aaKnown RBP17.75■□□□□ 0.43
CBWD1-210ENST00000464198 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
CBWD1-210ENST00000464198 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
CBWD1-210ENST00000464198 VASPP50552 380 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-210ENST00000464198 CLCN6P51797 869 aa17.65■□□□□ 0.42
CBWD1-210ENST00000464198 RASEFQ8IZ41 740 aa17.6■□□□□ 0.41
CBWD1-210ENST00000464198 PHF12Q96QT6 1004 aa17.6■□□□□ 0.41
CBWD1-210ENST00000464198 TSPYL2Q9H2G4 693 aaPredicted RBP17.6■□□□□ 0.41
CBWD1-210ENST00000464198 NUBP1P53384 320 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms