RNA–Protein interactions for RNA: ENST00000434839.2

XIST-206, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 2,865 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-206ENST00000434839 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 GAS2L3Q86XJ1 694 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 P3H3Q8IVL6 736 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 TRIM34Q9BYJ4 488 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 CCDC9Q9Y3X0 531 aaKnown RBP10.16□□□□□ -0.78
XIST-206ENST00000434839 CHD1O14646 1710 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.784e-10■□□□□ 8.5
XIST-206ENST00000434839 CEP120Q8N960 986 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 MROH2BQ7Z745 1585 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 ARAP1Q96P48 1450 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 HSPA5P11021 654 aaKnown RBP10.16□□□□□ -0.78
XIST-206ENST00000434839 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
XIST-206ENST00000434839 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 CARD10Q9BWT7 1032 aa10.16□□□□□ -0.78
XIST-206ENST00000434839 ABCA5Q8WWZ7 1642 aa10.15□□□□□ -0.78
XIST-206ENST00000434839 CCDC7Q96M83 1385 aa10.15□□□□□ -0.78
XIST-206ENST00000434839 HMGN5P82970 282 aaKnown RBP10.15□□□□□ -0.78
XIST-206ENST00000434839 SKOR2Q2VWA4 1001 aaPredicted RBP10.15□□□□□ -0.78
XIST-206ENST00000434839 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
XIST-206ENST00000434839 SCAPERQ9BY12 1400 aa10.15□□□□□ -0.78
XIST-206ENST00000434839 TMED8Q6PL24 325 aaPredicted RBP10.15□□□□□ -0.79
XIST-206ENST00000434839 ZKSCAN5Q9Y2L8 839 aa10.15□□□□□ -0.79
XIST-206ENST00000434839 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.15□□□□□ -0.79
XIST-206ENST00000434839 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
XIST-206ENST00000434839 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
XIST-206ENST00000434839 CALCOCO1Q9P1Z2 691 aa10.14□□□□□ -0.79
XIST-206ENST00000434839 FEZ1Q99689 392 aa10.14□□□□□ -0.79
XIST-206ENST00000434839 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
XIST-206ENST00000434839 PDE3BQ13370 1112 aa10.13□□□□□ -0.79
XIST-206ENST00000434839 IBTKQ9P2D0 1353 aaPredicted RBP10.13□□□□□ -0.79
XIST-206ENST00000434839 CAPN2P17655 700 aa10.13□□□□□ -0.79
XIST-206ENST00000434839 PANK3Q9H999 370 aa10.13□□□□□ -0.79
XIST-206ENST00000434839 EIF4G2P78344 907 aaKnown RBP eCLIP10.12□□□□□ -0.79
XIST-206ENST00000434839 CRBNQ96SW2 442 aa10.12□□□□□ -0.79
XIST-206ENST00000434839 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
XIST-206ENST00000434839 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
XIST-206ENST00000434839 NLRP1Q9C000 1473 aa10.12□□□□□ -0.79
XIST-206ENST00000434839 CHMP4CQ96CF2 233 aa10.12□□□□□ -0.79
XIST-206ENST00000434839 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
XIST-206ENST00000434839 PDCL2Q8N4E4 241 aa10.11□□□□□ -0.79
XIST-206ENST00000434839 KDM5BQ9UGL1 1544 aa10.11□□□□□ -0.79
XIST-206ENST00000434839 EGFL6Q8IUX8 553 aa10.11□□□□□ -0.79
XIST-206ENST00000434839 PDLIM2Q96JY6 352 aa10.11□□□□□ -0.79
XIST-206ENST00000434839 PLCD4Q9BRC7 762 aa10.11□□□□□ -0.79
XIST-206ENST00000434839 LMOD3Q0VAK6 560 aa10.1□□□□□ -0.79
XIST-206ENST00000434839 MFAP1P55081 439 aaKnown RBP10.1□□□□□ -0.79
XIST-206ENST00000434839 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
XIST-206ENST00000434839 CCDC144AA2RUR9 1427 aa10.09□□□□□ -0.79
XIST-206ENST00000434839 HSP90AB1P08238 724 aaKnown RBP10.09□□□□□ -0.79
XIST-206ENST00000434839 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
XIST-206ENST00000434839 MYCBPQ99417 103 aaPredicted RBP10.09□□□□□ -0.79
XIST-206ENST00000434839 MAGI1Q96QZ7 1491 aaPredicted RBP10.09□□□□□ -0.79
XIST-206ENST00000434839 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
XIST-206ENST00000434839 CLSTN1O94985 981 aa10.09□□□□□ -0.79
XIST-206ENST00000434839 NBPF20Q3BBV1 942 aa10.09□□□□□ -0.79
XIST-206ENST00000434839 LOC102724159A0A0B4J2E5 919 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 PWP2Q15269 919 aaKnown RBP10.08□□□□□ -0.8
XIST-206ENST00000434839 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
XIST-206ENST00000434839 UPF2Q9HAU5 1272 aaKnown RBP10.08□□□□□ -0.8
XIST-206ENST00000434839 ZBTB9Q96C00 473 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
XIST-206ENST00000434839 SLFN14P0C7P3 912 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 CTR9Q6PD62 1173 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 FAM43BQ6ZT52 329 aaPredicted RBP10.08□□□□□ -0.8
XIST-206ENST00000434839 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 FOXD4L1Q9NU39 408 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 CCDC39Q9UFE4 941 aa10.08□□□□□ -0.8
XIST-206ENST00000434839 CREBRFQ8IUR6 639 aa10.07□□□□□ -0.8
XIST-206ENST00000434839 SHROOM2Q13796 1616 aa10.07□□□□□ -0.8
XIST-206ENST00000434839 PRR29P0C7W0 189 aa10.07□□□□□ -0.8
XIST-206ENST00000434839 TNNT3P45378 269 aaPredicted RBP10.07□□□□□ -0.8
XIST-206ENST00000434839 GBP4Q96PP9 640 aa10.07□□□□□ -0.8
XIST-206ENST00000434839 NCAPGQ9BPX3 1015 aa10.07□□□□□ -0.8
XIST-206ENST00000434839 FEZ2Q9UHY8 353 aaPredicted RBP10.07□□□□□ -0.8
XIST-206ENST00000434839 HSP90AB3PQ58FF7 597 aa10.06□□□□□ -0.8
XIST-206ENST00000434839 TBC1D32Q96NH3 1257 aa10.06□□□□□ -0.8
XIST-206ENST00000434839 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
XIST-206ENST00000434839 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
XIST-206ENST00000434839 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
XIST-206ENST00000434839 KIAA2012Q0VF49 1180 aa10.05□□□□□ -0.8
XIST-206ENST00000434839 POLR1AO95602 1720 aaPredicted RBP10.05□□□□□ -0.8
XIST-206ENST00000434839 U2AF2P26368 475 aaKnown RBP eCLIP10.04□□□□□ -0.82e-22■■■■■ 35.3
XIST-206ENST00000434839 SATB1Q01826 763 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 SIRT1Q96EB6 747 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 BCL2L12Q9HB09 334 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 SMC4Q9NTJ3 1288 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
XIST-206ENST00000434839 GTF2A1P52655 376 aaPredicted RBP10.04□□□□□ -0.8
XIST-206ENST00000434839 ANKRD7Q92527 254 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
XIST-206ENST00000434839 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
XIST-206ENST00000434839 HMGB1P09429 215 aaKnown RBP10.04□□□□□ -0.8
XIST-206ENST00000434839 TERF2Q15554 542 aa10.03□□□□□ -0.8
XIST-206ENST00000434839 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
XIST-206ENST00000434839 RAPGEF2Q9Y4G8 1499 aa10.03□□□□□ -0.8
XIST-206ENST00000434839 PLIN1O60240 522 aa10.03□□□□□ -0.8
XIST-206ENST00000434839 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
XIST-206ENST00000434839 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms