RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Evc2Q8K1G2 1220 aa17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 NaspQ99MD9 773 aaKnown RBP17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Rpgrip1lQ8CG73 1264 aa17.39■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Tpm4Q6IRU2 248 aa17.39■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Znhit6Q3UFB2 460 aaKnown RBP17.39■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Rnf20Q5DTM8 973 aa17.39■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 MyclP10166 368 aa17.39■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Phactr2B1AVP0 632 aa17.38■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Gm21969J3QJZ1 289 aa17.38■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Pnmal2G3X9N3 661 aa17.38■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Dusp9Q7TNL7 452 aa17.38■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Washc2Q6PGL7 1334 aa17.37■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Ppp2r3aB2RXC8 1150 aa17.37■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Triml2E9PW10 424 aa17.37■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 PnisrA2AJT4 805 aaKnown RBP17.36■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Rsph4aQ8BYM7 716 aa17.36■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Sart1Q9Z315 806 aaKnown RBP17.36■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Usp40Q8BWR4 1235 aa17.36■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Rab11fip3Q8CHD8 1047 aa17.36■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Ddx11Q6AXC6 880 aa17.36■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Rec8Q8C5S7 591 aa17.35■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 1700010I14RikQ7TPG0 532 aa17.35■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Hook1Q8BIL5 728 aa17.35■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Q9D2X8 372 aa17.35■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Cchcr1Q8K2I2 770 aa17.34■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Cwc15Q9JHS9 229 aaKnown RBP17.34■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Pank1Q8K4K6 548 aa17.34■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Txndc2Q6P902 515 aa17.34■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Tceal9Q9DD24 104 aa17.34■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Utp14aQ640M1 767 aaKnown RBP17.33■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Gpatch3Q8BIY1 525 aa17.33■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Ubxn4Q8VCH8 506 aa17.33■□□□□ 0.37
Pcdha8-201ENSMUST00000194038 Arid3cA6PWV5 409 aa17.33■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Mcm2P97310 904 aa17.33■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Sox12Q04890 314 aa17.33■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 PogkQ80TC5 607 aa17.33■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Fez1Q8K0X8 392 aa17.33■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Cdkn1cP49919 348 aa17.32■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Tnpo1Q8BFY9 898 aaKnown RBP17.32■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Fam13bQ8K2H3 851 aa17.32■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Vps8Q0P5W1 1427 aa17.32■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Smarca2Q6DIC0 1577 aa17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Rnf214Q8BFU3 668 aaKnown RBP17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 HdgfP51859 237 aaKnown RBP17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Cc2d1aQ8K1A6 943 aa17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 BccipQ9CWI3 316 aa17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Gcom1E9PZ54 550 aa17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 MyzapQ3UIJ9 466 aa17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 PhaxQ9JJT9 385 aaKnown RBP17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Cux2P70298 1426 aa17.31■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Gnai1B2RSH2 354 aa17.3■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Gnai3Q9DC51 354 aa17.3■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Nek4Q9Z1J2 792 aa17.3■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Slc4a2P13808 1237 aaKnown RBP17.3■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 SkilQ60665 675 aa17.3■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Cplx1P63040 134 aa17.3■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Smc4Q8CG47 1286 aa17.29■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Rufy1Q8BIJ7 712 aa17.29■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Ric3Q8BPM6 367 aa17.29■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Mns1Q61884 491 aa17.29■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 PdcQ9QW08 244 aa17.29■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Cux1P53564 1515 aa17.29■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Samd1D3YXK1 519 aa17.28■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Ints3Q7TPD0 1041 aaKnown RBP17.28■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Synj1Q8CHC4 1574 aa17.28■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Erc2Q6PH08 957 aa17.28■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Mad1l1Q9WTX8 717 aaKnown RBP17.27■□□□□ 0.36
Pcdha8-201ENSMUST00000194038 Zkscan1Q8BGS3 561 aaKnown RBP17.27■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Rbm10Q99KG3 930 aaKnown RBP17.26■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Ccdc171E9Q1U1 1324 aa17.26■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Krt82Q99M74 516 aa17.26■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Sycp2Q9CUU3 1500 aa17.26■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 AppP12023 770 aa17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Kif3cO35066 796 aa17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Zfp444Q3TDV8 331 aaKnown RBP17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Rbm25B2RY56 838 aaKnown RBP17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Swt1Q9DBQ9 907 aa17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Cyp46a1Q9WVK8 500 aa17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Dhx29Q6PGC1 1365 aaKnown RBP17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 AnlnQ8K298 1121 aaKnown RBP17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Kri1Q8VDQ9 704 aaKnown RBP17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Usp16Q99LG0 825 aa17.25■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Nop14Q8R3N1 860 aaKnown RBP17.24■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Kif20aP97329 887 aa17.24■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Hmox1P14901 289 aa17.24■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Ppp1r18Q8BQ30 594 aa17.24■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Ap3b2Q9JME5 1082 aa17.24■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Arid4aF8VPQ2 1261 aaKnown RBP17.23■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 CalrP14211 416 aaKnown RBP17.23■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Hnrnpul1Q8VDM6 859 aaKnown RBP17.23■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Psma5Q9Z2U1 241 aaKnown RBP17.23■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Dhx8A2A4P0 1244 aaKnown RBP17.22■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Cecr2E9Q2Z1 1453 aa17.22■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Cabp4Q8VHC5 271 aa17.21■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Cfap99A0A140LIX9 648 aa17.21■□□□□ 0.35
Pcdha8-201ENSMUST00000194038 Chaf1aQ9QWF0 911 aa17.21■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Zkscan2G3X952 960 aa17.2■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Wdr78E9PYY5 807 aa17.2■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Sptbn5F6UCX4 1208 aa17.2■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Fam193aQ8CGI1 1231 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms