RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Ift140E9PY46 1464 aa13.03□□□□□ -0.32
Nup50-201ENSMUST00000165443 Ccdc47Q9D024 483 aaKnown RBP13.03□□□□□ -0.32
Nup50-201ENSMUST00000165443 Eif4g1Q6NZJ6 1600 aaKnown RBP13.03□□□□□ -0.32
Nup50-201ENSMUST00000165443 KinQ8K339 391 aa13.03□□□□□ -0.32
Nup50-201ENSMUST00000165443 Cetn4Q8K4K1 168 aa13.02□□□□□ -0.32
Nup50-201ENSMUST00000165443 Ap3b2Q9JME5 1082 aa13.02□□□□□ -0.32
Nup50-201ENSMUST00000165443 SetQ9EQU5 289 aaKnown RBP13.02□□□□□ -0.33
Nup50-201ENSMUST00000165443 Sh3bgrQ9WUZ7 214 aa13.02□□□□□ -0.33
Nup50-201ENSMUST00000165443 Sox12Q04890 314 aa13.02□□□□□ -0.33
Nup50-201ENSMUST00000165443 Nsd2Q8BVE8 1365 aa13.02□□□□□ -0.33
Nup50-201ENSMUST00000165443 Znf710Q3U288 666 aa13.01□□□□□ -0.33
Nup50-201ENSMUST00000165443 Ccdc30Q8BVF4 654 aa13.01□□□□□ -0.33
Nup50-201ENSMUST00000165443 Vps8Q0P5W1 1427 aa13.01□□□□□ -0.33
Nup50-201ENSMUST00000165443 Naip1Q9QWK5 1403 aa13.01□□□□□ -0.33
Nup50-201ENSMUST00000165443 Slc4a10Q5DTL9 1118 aa13.01□□□□□ -0.33
Nup50-201ENSMUST00000165443 Cplx2P84086 134 aa13□□□□□ -0.33
Nup50-201ENSMUST00000165443 Smc4Q8CG47 1286 aa13□□□□□ -0.33
Nup50-201ENSMUST00000165443 Eif2s2Q99L45 331 aaKnown RBP13□□□□□ -0.33
Nup50-201ENSMUST00000165443 Cux1P53564 1515 aa13□□□□□ -0.33
Nup50-201ENSMUST00000165443 EprsQ8CGC7 1512 aaKnown RBP13□□□□□ -0.33
Nup50-201ENSMUST00000165443 Gpatch11Q3UFS4 262 aa13□□□□□ -0.33
Nup50-201ENSMUST00000165443 Srek1Q8BZX4 494 aaKnown RBP12.99□□□□□ -0.33
Nup50-201ENSMUST00000165443 Kif21aQ9QXL2 1672 aa12.99□□□□□ -0.33
Nup50-201ENSMUST00000165443 Ecm2Q5FW85 670 aa12.99□□□□□ -0.33
Nup50-201ENSMUST00000165443 Ncoa2Q61026 1462 aa12.98□□□□□ -0.33
Nup50-201ENSMUST00000165443 Rpgrip1lQ8CG73 1264 aa12.98□□□□□ -0.33
Nup50-201ENSMUST00000165443 Gnai1B2RSH2 354 aa12.98□□□□□ -0.33
Nup50-201ENSMUST00000165443 Tpd52l1O54818 204 aa12.98□□□□□ -0.33
Nup50-201ENSMUST00000165443 Gnai3Q9DC51 354 aa12.98□□□□□ -0.33
Nup50-201ENSMUST00000165443 Samd9lQ69Z37 1561 aa12.98□□□□□ -0.33
Nup50-201ENSMUST00000165443 Cc2d2bA0A286YDU8 1405 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Gripap1Q8VD04 806 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Cabp4Q8VHC5 271 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Tiam1Q60610 1591 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Tdrd9Q14BI7 1383 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Plekhh1Q80TI1 1356 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Kif4P33174 1231 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Rfx1P48377 963 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Evc2Q8K1G2 1220 aa12.97□□□□□ -0.33
Nup50-201ENSMUST00000165443 Tpm1P58771 284 aa12.96□□□□□ -0.33
Nup50-201ENSMUST00000165443 Rnf20Q5DTM8 973 aa12.96□□□□□ -0.33
Nup50-201ENSMUST00000165443 ErbinQ80TH2 1402 aa12.96□□□□□ -0.33
Nup50-201ENSMUST00000165443 Grin2aP35436 1464 aa12.96□□□□□ -0.33
Nup50-201ENSMUST00000165443 Senp3Q9EP97 568 aaKnown RBP12.96□□□□□ -0.34
Nup50-201ENSMUST00000165443 A0A1L1SQF0 893 aa12.96□□□□□ -0.34
Nup50-201ENSMUST00000165443 Prdm16A2A935 1275 aa12.96□□□□□ -0.34
Nup50-201ENSMUST00000165443 PnisrA2AJT4 805 aaKnown RBP12.96□□□□□ -0.34
Nup50-201ENSMUST00000165443 Gm7298A0A0N4SVU1 1476 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 CadpsQ80TJ1 1355 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ccdc183A2AJB1 534 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Shq1Q7TMX5 569 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Jph4Q80WT0 628 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Tceal9Q9DD24 104 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ankrd26Q811D2 1581 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ccdc173A0JLY1 547 aa12.95□□□□□ -0.34
Nup50-201ENSMUST00000165443 Mcm2P97310 904 aa12.94□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ttll13A4Q9F6 804 aa12.94□□□□□ -0.34
Nup50-201ENSMUST00000165443 Swt1Q9DBQ9 907 aa12.93□□□□□ -0.34
Nup50-201ENSMUST00000165443 Gm21969J3QJZ1 289 aa12.93□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ipo7Q9EPL8 1038 aaKnown RBP12.93□□□□□ -0.34
Nup50-201ENSMUST00000165443 Utp3Q9JI13 469 aaKnown RBP12.93□□□□□ -0.34
Nup50-201ENSMUST00000165443 Triml2E9PW10 424 aa12.93□□□□□ -0.34
Nup50-201ENSMUST00000165443 Pknox2Q8BG99 474 aa12.92□□□□□ -0.34
Nup50-201ENSMUST00000165443 PhaxQ9JJT9 385 aaKnown RBP12.92□□□□□ -0.34
Nup50-201ENSMUST00000165443 Hmgn5Q9JL35 406 aa12.92□□□□□ -0.34
Nup50-201ENSMUST00000165443 Pcf11G3X9Z4 1553 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ccdc171E9Q1U1 1324 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Mink1Q9JM52 1308 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ddx11Q6AXC6 880 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Kif3aP28741 701 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Taf3Q5HZG4 932 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Ric3Q8BPM6 367 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Cchcr1Q8K2I2 770 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Smc3Q9CW03 1217 aaKnown RBP12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Q9D2X8 372 aa12.91□□□□□ -0.34
Nup50-201ENSMUST00000165443 Disp1Q3TDN0 1521 aa12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 KarsQ99MN1 595 aaKnown RBP12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 Isy1Q69ZQ2 285 aaKnown RBP12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 Erc2Q6PH08 957 aa12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 EzrP26040 586 aaKnown RBP12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 Tpm2P58774 284 aa12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 Pdcl3Q8BVF2 240 aa12.9□□□□□ -0.34
Nup50-201ENSMUST00000165443 Gsto1O09131 240 aa12.9□□□□□ -0.35
Nup50-201ENSMUST00000165443 Usp16Q99LG0 825 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 1700010I14RikQ7TPG0 532 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 Bicd2Q921C5 820 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 FanciQ8K368 1330 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 SkilQ60665 675 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 Taok2Q6ZQ29 1240 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 Fbxo2Q80UW2 297 aa12.89□□□□□ -0.35
Nup50-201ENSMUST00000165443 Hoxa7P02830 229 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ggt6Q6PDE7 497 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Slc4a2P13808 1237 aaKnown RBP12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ccdc34Q3UI66 367 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Ncapd3Q6ZQK0 1506 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Pla2r1Q62028 1487 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Phactr2B1AVP0 632 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Plekhg5Q66T02 1073 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Pank1Q8K4K6 548 aa12.88□□□□□ -0.35
Nup50-201ENSMUST00000165443 Rbm25B2RY56 838 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms