RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Tarbp1E9Q368 1579 aa33.1■■■□□ 2.89
Shox2-204ENSMUST00000162439 Thsd7aQ69ZU6 1645 aa33.1■■■□□ 2.89
Shox2-204ENSMUST00000162439 Trak1Q6PD31 939 aa33.09■■■□□ 2.89
Shox2-204ENSMUST00000162439 Lmtk3Q5XJV6 1424 aa33.08■■■□□ 2.89
Shox2-204ENSMUST00000162439 Atp7aQ64430 1491 aa33.07■■■□□ 2.88
Shox2-204ENSMUST00000162439 Prrc2bQ7TPM1 1486 aaKnown RBP33.07■■■□□ 2.88
Shox2-204ENSMUST00000162439 PtprgQ05909 1442 aa33.07■■■□□ 2.88
Shox2-204ENSMUST00000162439 PplQ9R269 1755 aa33.06■■■□□ 2.88
Shox2-204ENSMUST00000162439 Uggt1Q6P5E4 1551 aa33.06■■■□□ 2.88
Shox2-204ENSMUST00000162439 PalldQ9ET54 1408 aa33.03■■■□□ 2.88
Shox2-204ENSMUST00000162439 Mbd5B1AYB6 1498 aa33.03■■■□□ 2.88
Shox2-204ENSMUST00000162439 Mia2Q91ZV0 1396 aa33.02■■■□□ 2.88
Shox2-204ENSMUST00000162439 Asxl2Q8BZ32 1370 aa33■■■□□ 2.87
Shox2-204ENSMUST00000162439 Sall3Q62255 1320 aa33■■■□□ 2.87
Shox2-204ENSMUST00000162439 Col18a1P39061 1774 aa32.98■■■□□ 2.87
Shox2-204ENSMUST00000162439 Cypt1Q8CH20 168 aa32.98■■■□□ 2.87
Shox2-204ENSMUST00000162439 Cdk13Q69ZA1 1511 aaKnown RBP32.97■■■□□ 2.87
Shox2-204ENSMUST00000162439 Mroh1E0CZ22 1640 aa32.96■■■□□ 2.87
Shox2-204ENSMUST00000162439 Brinp3Q499E0 766 aa32.95■■■□□ 2.87
Shox2-204ENSMUST00000162439 Tom1O88746 492 aa32.93■■■□□ 2.86
Shox2-204ENSMUST00000162439 DnmbpQ6TXD4 1580 aa32.92■■■□□ 2.86
Shox2-204ENSMUST00000162439 Edc4Q3UJB9 1406 aaKnown RBP32.91■■■□□ 2.86
Shox2-204ENSMUST00000162439 Ankrd36D3Z4K0 1415 aa32.9■■■□□ 2.86
Shox2-204ENSMUST00000162439 ErbinQ80TH2 1402 aa32.9■■■□□ 2.86
Shox2-204ENSMUST00000162439 Ehbp1l1Q99MS7 1716 aa32.9■■■□□ 2.86
Shox2-204ENSMUST00000162439 AatkQ80YE4 1365 aa32.88■■■□□ 2.85
Shox2-204ENSMUST00000162439 Abca8aQ8K442 1620 aa32.88■■■□□ 2.85
Shox2-204ENSMUST00000162439 Pik3c2gO70167 1506 aa32.87■■■□□ 2.85
Shox2-204ENSMUST00000162439 Slit3Q9WVB4 1523 aa32.87■■■□□ 2.85
Shox2-204ENSMUST00000162439 Slain2Q8CI08 581 aa32.86■■■□□ 2.85
Shox2-204ENSMUST00000162439 Arhgef28P97433 1693 aa32.85■■■□□ 2.85
Shox2-204ENSMUST00000162439 Evi5lH3BKQ3 813 aa32.84■■■□□ 2.85
Shox2-204ENSMUST00000162439 Tns3Q5SSZ5 1440 aa32.83■■■□□ 2.85
Shox2-204ENSMUST00000162439 Gimap5Q8BWF2 308 aa32.8■■■□□ 2.84
Shox2-204ENSMUST00000162439 AU022751B1B0V2 589 aa32.78■■■□□ 2.84
Shox2-204ENSMUST00000162439 Atp1b4Q99ME6 356 aa32.77■■■□□ 2.84
Shox2-204ENSMUST00000162439 Mphosph9A6H5Y1 991 aa32.75■■■□□ 2.83
Shox2-204ENSMUST00000162439 Arap3Q8R5G7 1538 aa32.75■■■□□ 2.83
Shox2-204ENSMUST00000162439 Nyap1Q6PFX7 833 aa32.72■■■□□ 2.83
Shox2-204ENSMUST00000162439 Q9D9H8 365 aa32.71■■■□□ 2.83
Shox2-204ENSMUST00000162439 Dhx9O70133 1380 aaKnown RBP32.7■■■□□ 2.82
Shox2-204ENSMUST00000162439 Rprd2Q6NXI6 1469 aaKnown RBP32.69■■■□□ 2.82
Shox2-204ENSMUST00000162439 Pik3c2aQ61194 1686 aa32.69■■■□□ 2.82
Shox2-204ENSMUST00000162439 Fbln2P37889 1221 aa32.68■■■□□ 2.82
Shox2-204ENSMUST00000162439 Ttll13A4Q9F6 804 aa32.67■■■□□ 2.82
Shox2-204ENSMUST00000162439 Cypt2Q6P924 180 aa32.65■■■□□ 2.82
Shox2-204ENSMUST00000162439 Shq1Q7TMX5 569 aa32.64■■■□□ 2.82
Shox2-204ENSMUST00000162439 Kif7B7ZNG0 1348 aa32.63■■■□□ 2.81
Shox2-204ENSMUST00000162439 HnrnpmQ9D0E1 729 aaKnown RBP32.62■■■□□ 2.81
Shox2-204ENSMUST00000162439 Myom1Q62234 1667 aaKnown RBP32.62■■■□□ 2.81
Shox2-204ENSMUST00000162439 Tmem94Q7TSH8 1360 aa32.61■■■□□ 2.81
Shox2-204ENSMUST00000162439 Pik3r4Q8VD65 1358 aa32.61■■■□□ 2.81
Shox2-204ENSMUST00000162439 Slc5a4bQ91ZP4 660 aa32.59■■■□□ 2.81
Shox2-204ENSMUST00000162439 Qtrt2B8ZXI1 415 aa32.57■■■□□ 2.8
Shox2-204ENSMUST00000162439 Kif21bQ9QXL1 1668 aa32.56■■■□□ 2.8
Shox2-204ENSMUST00000162439 Unc13bQ9Z1N9 1602 aa32.55■■■□□ 2.8
Shox2-204ENSMUST00000162439 Atf3Q60765 181 aa32.54■■■□□ 2.8
Shox2-204ENSMUST00000162439 Nwd1A6H603 1563 aa32.53■■■□□ 2.8
Shox2-204ENSMUST00000162439 Col14a1Q80X19 1797 aa32.5■■■□□ 2.79
Shox2-204ENSMUST00000162439 Pkd2O35245 966 aa32.5■■■□□ 2.79
Shox2-204ENSMUST00000162439 Hdac5Q9Z2V6 1113 aa32.5■■■□□ 2.79
Shox2-204ENSMUST00000162439 Mroh3A0A1D5RM54 893 aa32.49■■■□□ 2.79
Shox2-204ENSMUST00000162439 Slit2Q9R1B9 1521 aa32.48■■■□□ 2.79
Shox2-204ENSMUST00000162439 Plxnc1Q9QZC2 1574 aa32.46■■■□□ 2.79
Shox2-204ENSMUST00000162439 Dot1lQ6XZL8 1540 aa32.46■■■□□ 2.79
Shox2-204ENSMUST00000162439 Sema6bO54951 886 aa32.43■■■□□ 2.78
Shox2-204ENSMUST00000162439 Fnbp4Q6ZQ03 1031 aa32.42■■■□□ 2.78
Shox2-204ENSMUST00000162439 Dapk1Q80YE7 1442 aa32.41■■■□□ 2.78
Shox2-204ENSMUST00000162439 Ift172Q6VH22 1749 aa32.4■■■□□ 2.78
Shox2-204ENSMUST00000162439 Ehmt2Q9Z148 1263 aaKnown RBP32.4■■■□□ 2.78
Shox2-204ENSMUST00000162439 NalcnQ8BXR5 1738 aa32.39■■■□□ 2.78
Shox2-204ENSMUST00000162439 Ppip5k1A2ARP1 1436 aa32.38■■■□□ 2.77
Shox2-204ENSMUST00000162439 Washc2Q6PGL7 1334 aa32.37■■■□□ 2.77
Shox2-204ENSMUST00000162439 Cntnap1O54991 1385 aa32.34■■■□□ 2.77
Shox2-204ENSMUST00000162439 MaddQ80U28 1577 aa32.33■■■□□ 2.77
Shox2-204ENSMUST00000162439 Cps1Q8C196 1500 aa32.33■■■□□ 2.77
Shox2-204ENSMUST00000162439 Znf526Q8BI66 675 aa32.33■■■□□ 2.77
Shox2-204ENSMUST00000162439 Nhsl1Q8CAF4 1587 aa32.32■■■□□ 2.77
Shox2-204ENSMUST00000162439 KdrP35918 1367 aa32.31■■■□□ 2.76
Shox2-204ENSMUST00000162439 C3P01027 1663 aa32.3■■■□□ 2.76
Shox2-204ENSMUST00000162439 Bcl2l12Q9D3J3 255 aa32.29■■■□□ 2.76
Shox2-204ENSMUST00000162439 Rims1Q99NE5 1463 aa32.29■■■□□ 2.76
Shox2-204ENSMUST00000162439 Stk26Q99JT2 416 aa32.28■■■□□ 2.76
Shox2-204ENSMUST00000162439 Ybx3Q9JKB3 361 aaKnown RBP32.28■■■□□ 2.76
Shox2-204ENSMUST00000162439 Zfp142G5E869 1843 aa32.28■■■□□ 2.76
Shox2-204ENSMUST00000162439 Gm10563F6WIE4 79 aa32.27■■■□□ 2.76
Shox2-204ENSMUST00000162439 Adgrl1Q80TR1 1466 aa32.27■■■□□ 2.76
Shox2-204ENSMUST00000162439 Itsn2Q9Z0R6 1659 aa32.27■■■□□ 2.76
Shox2-204ENSMUST00000162439 Ccer2J3QPU5 274 aa32.26■■■□□ 2.75
Shox2-204ENSMUST00000162439 Utp14aQ640M1 767 aaKnown RBP32.26■■■□□ 2.75
Shox2-204ENSMUST00000162439 MypopQ8R4U1 393 aa32.26■■■□□ 2.75
Shox2-204ENSMUST00000162439 Kif20bQ80WE4 1774 aaKnown RBP32.25■■■□□ 2.75
Shox2-204ENSMUST00000162439 PtprvP70289 1705 aa32.25■■■□□ 2.75
Shox2-204ENSMUST00000162439 Ddx17Q501J6 650 aaKnown RBP32.24■■■□□ 2.75
Shox2-204ENSMUST00000162439 Slc52a2Q9D8F3 450 aa32.24■■■□□ 2.75
Shox2-204ENSMUST00000162439 Pik3c2bE9QAN8 1632 aa32.23■■■□□ 2.75
Shox2-204ENSMUST00000162439 Kif24Q6NWW5 1356 aa32.22■■■□□ 2.75
Shox2-204ENSMUST00000162439 Tulp4Q9JIL5 1547 aa32.21■■■□□ 2.75
Shox2-204ENSMUST00000162439 Q3UJC8 639 aa32.2■■■□□ 2.75
Shox2-204ENSMUST00000162439 Rreb1Q3UH06 1700 aaKnown RBP32.2■■■□□ 2.74
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms