RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Q9D2X8 372 aa14.39□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Nek4Q9Z1J2 792 aa14.39□□□□□ -0.11
Ndc1-204ENSMUST00000139560 HdgfP51859 237 aaKnown RBP14.38□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Eif4g2Q62448 906 aaKnown RBP14.38□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Nol10Q5RJG1 687 aaKnown RBP14.38□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Rad54l2Q99NG0 1466 aa14.38□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Kif16bB1AVY7 1312 aa14.38□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Stk31Q99MW1 1018 aa14.37□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Filip1lQ6P6L0 1131 aa14.37□□□□□ -0.11
Ndc1-204ENSMUST00000139560 FosbP13346 338 aa14.36□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Stard8Q8K031 1019 aa14.36□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Wdr78E9PYY5 807 aa14.36□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Arid4aF8VPQ2 1261 aaKnown RBP14.36□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Tspyl2Q7TQI8 677 aa14.34□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Ralbp1Q62172 648 aa14.34□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Drc7Q6V3W6 876 aa14.34□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Fam13bQ8K2H3 851 aa14.34□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Ccer1Q9CQL2 403 aa14.34□□□□□ -0.11
Ndc1-204ENSMUST00000139560 St18Q80TY4 1045 aa14.33□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Sh3bgrQ9WUZ7 214 aa14.33□□□□□ -0.11
Ndc1-204ENSMUST00000139560 Liat1Q810M6 228 aa14.33□□□□□ -0.12
Ndc1-204ENSMUST00000139560 BccipQ9CWI3 316 aa14.33□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Gm21190A0A0G2JGJ6 266 aa14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Ssh1Q76I79 1042 aa14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 4933402E13RikQ9D4D2 429 aa14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Gripap1Q8VD04 806 aa14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 A0A0U1RNP2 1173 aa14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Cald1E9QA15 768 aaKnown RBP14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Pde4cQ3UEI1 686 aa14.32□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Cttnbp2B9EJA2 1648 aa14.31□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Map3k5O35099 1380 aa14.31□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Iqgap2Q3UQ44 1575 aa14.31□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Calcoco2A2A6M5 331 aa14.31□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Q9D9H8 365 aa14.3□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Tpd52l1O54818 204 aa14.3□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Dixdc1Q80Y83 711 aa14.3□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Mad1l1Q9WTX8 717 aaKnown RBP14.3□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Rsph4aQ8BYM7 716 aa14.29□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Podxl2Q8CAE9 603 aa14.29□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Cog6Q8R3I3 657 aa14.29□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Usp48Q3V0C5 1052 aa14.28□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Atp6v1dP57746 247 aa14.27□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Ppp2r1aQ76MZ3 589 aa14.27□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Usp16Q99LG0 825 aa14.27□□□□□ -0.12
Ndc1-204ENSMUST00000139560 Ppp2r3aB2RXC8 1150 aa14.27□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Pdia4P08003 638 aaKnown RBP14.27□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Efcab5A0JP43 1406 aa14.27□□□□□ -0.13
Ndc1-204ENSMUST00000139560 ErbinQ80TH2 1402 aa14.27□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Ncapd3Q6ZQK0 1506 aa14.27□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Shroom4Q1W617 1475 aa14.26□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Puf60Q3UEB3 564 aaKnown RBP14.26□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Kif4P33174 1231 aa14.26□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Ric3Q8BPM6 367 aa14.26□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Bicd2Q921C5 820 aa14.26□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Fmnl2A2APV2 1086 aa14.25□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Rbm25B2RY56 838 aaKnown RBP14.25□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Frmd3Q8BHD4 595 aa14.25□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Dhx9O70133 1380 aaKnown RBP14.25□□□□□ -0.13
Ndc1-204ENSMUST00000139560 R3hcc1Q8BSI6 488 aa14.25□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Cspp1B2RX88 1205 aa14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Pde3bQ61409 1100 aa14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Tfip11Q9ERA6 838 aaKnown RBP14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Urb2E9Q7L1 1524 aaKnown RBP14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Nap1l3Q794H2 544 aa14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Atp2b2Q9R0K7 1198 aa14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Smarce1O54941 411 aaKnown RBP14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Hmox1P14901 289 aa14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Rrp9Q91WM3 475 aaKnown RBP14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Pnmal2G3X9N3 661 aa14.24□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Naip1Q9QWK5 1403 aa14.23□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Stk3Q9JI10 497 aa14.22□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Plekhh1Q80TI1 1356 aa14.22□□□□□ -0.13
Ndc1-204ENSMUST00000139560 AppP12023 770 aa14.21□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Cgnl1Q6AW69 1298 aa14.21□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Bcl2l13P59017 434 aa14.21□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Gtf2a1Q99PM3 378 aa14.21□□□□□ -0.13
Ndc1-204ENSMUST00000139560 Hnrnpul1Q8VDM6 859 aaKnown RBP14.21□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Atl3Q91YH5 541 aa14.21□□□□□ -0.14
Ndc1-204ENSMUST00000139560 SkilQ60665 675 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Top2bQ64511 1612 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Sptbn5F6UCX4 1208 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Arap1Q4LDD4 1452 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Fam193aQ8CGI1 1231 aaKnown RBP14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Pip4k2bQ80XI4 416 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Atxn3Q9CVD2 355 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Smc3Q9CW03 1217 aaKnown RBP14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Arhgap31A6X8Z5 1425 aa14.2□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Gsto1O09131 240 aa14.19□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Duox2A2AQ99 1517 aa14.19□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Kif18aQ91WD7 886 aa14.19□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Fyb1O35601 819 aa14.19□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Ankrd36D3Z4K0 1415 aa14.19□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Taf3Q5HZG4 932 aa14.19□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Ciz1Q8VEH2 845 aa14.18□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Top2aQ01320 1528 aaKnown RBP14.18□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Tceal9Q9DD24 104 aa14.18□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Ttll5Q8CHB8 1328 aa14.18□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Phf14Q9D4H9 881 aa14.17□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Cpa2Q504N0 417 aa14.17□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Olfml1Q8BSH2 233 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms