RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Ercc6l2Q9JIM3 1537 aa17.49■□□□□ 0.39
Ddx55-202ENSMUST00000111438 Plxnc1Q9QZC2 1574 aa17.46■□□□□ 0.39
Ddx55-202ENSMUST00000111438 Cpsf1Q9EPU4 1441 aaKnown RBP17.46■□□□□ 0.39
Ddx55-202ENSMUST00000111438 Stk24Q99KH8 431 aa17.46■□□□□ 0.39
Ddx55-202ENSMUST00000111438 4930407I10RikD3Z5T8 1512 aa17.45■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Bcl9Q9D219 1425 aa17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Myom1Q62234 1667 aaKnown RBP17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Mug2P28666 1451 aa17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 PtprmP28828 1452 aa17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Cdk13Q69ZA1 1511 aaKnown RBP17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Rims1Q99NE5 1463 aa17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Polr3aB2RXC6 1390 aa17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Cep152A2AUM9 1736 aaKnown RBP17.44■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Mroh3A0A1D5RM54 893 aa17.43■□□□□ 0.38
Ddx55-202ENSMUST00000111438 MlecQ6ZQI3 291 aaKnown RBP17.42■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Naip7Q9JIB3 1402 aa17.41■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Myt1Q8CFC2 1127 aa17.41■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Anks4bQ8K3X6 423 aa17.41■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Zc3h13E9Q784 1729 aaKnown RBP17.4■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Topaz1E5FYH1 1653 aa17.4■□□□□ 0.38
Ddx55-202ENSMUST00000111438 Gm13697A2AK42 830 aa17.39■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Prrc2bQ7TPM1 1486 aaKnown RBP17.39■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Ppargc1bQ8VHJ7 1014 aa17.38■□□□□ 0.37
Ddx55-202ENSMUST00000111438 PplQ9R269 1755 aa17.37■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Cdk5rap2Q8K389 1822 aa17.37■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Brwd3A2AHJ4 1799 aa17.36■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Gemin5Q8BX17 1502 aaKnown RBP17.36■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Grwd1Q810D6 446 aaKnown RBP17.35■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Myo3aQ8K3H5 1613 aa17.35■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Ifit1bl1D3Z6F0 470 aa17.35■□□□□ 0.37
Ddx55-202ENSMUST00000111438 AU022751B1B0V2 589 aa17.34■□□□□ 0.37
Ddx55-202ENSMUST00000111438 Sall2Q9QX96 1004 aa17.34■□□□□ 0.37
Ddx55-202ENSMUST00000111438 RalgapbQ8BQZ4 1484 aa17.33■□□□□ 0.37
Ddx55-202ENSMUST00000111438 MyclP10166 368 aa17.33■□□□□ 0.36
Ddx55-202ENSMUST00000111438 Sipa1l1Q8C0T5 1782 aa17.33■□□□□ 0.36
Ddx55-202ENSMUST00000111438 Dapk1Q80YE7 1442 aa17.33■□□□□ 0.36
Ddx55-202ENSMUST00000111438 Setd1aE9PYH6 1716 aa17.33■□□□□ 0.36
Ddx55-202ENSMUST00000111438 Eif2ak4Q9QZ05 1648 aa17.32■□□□□ 0.36
Ddx55-202ENSMUST00000111438 Arhgef28P97433 1693 aa17.32■□□□□ 0.36
Ddx55-202ENSMUST00000111438 MaddQ80U28 1577 aa17.29■□□□□ 0.36
Ddx55-202ENSMUST00000111438 DiexfQ8BTT6 772 aaKnown RBP17.27■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Aebp2Q9Z248 504 aaKnown RBP17.26■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Rundc1Q0VDN7 615 aa17.25■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Ift172Q6VH22 1749 aa17.24■□□□□ 0.35
Ddx55-202ENSMUST00000111438 DnmbpQ6TXD4 1580 aa17.24■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Dip2aQ8BWT5 1523 aa17.24■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Rimbp3Q3V0F0 1606 aa17.24■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Lmtk3Q5XJV6 1424 aa17.23■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Slc52a2Q9D8F3 450 aa17.23■□□□□ 0.35
Ddx55-202ENSMUST00000111438 GphnQ8BUV3 769 aaKnown RBP17.22■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Kdm2aP59997 1161 aa17.21■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Card11Q8CIS0 1159 aa17.21■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Slit3Q9WVB4 1523 aa17.21■□□□□ 0.35
Ddx55-202ENSMUST00000111438 Phlpp1Q8CHE4 1687 aa17.21■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Srpk2O54781 681 aaKnown RBP17.2■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Aplp2Q06335 707 aa17.19■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Txndc2Q6P902 515 aa17.19■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Lrrc7Q80TE7 1490 aa17.19■□□□□ 0.34
Ddx55-202ENSMUST00000111438 PalldQ9ET54 1408 aa17.19■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Gm20521D3Z5F7 333 aa17.18■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Fan1Q69ZT1 1020 aa17.18■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Nphp4P59240 1425 aa17.17■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Pola1P33609 1465 aa17.17■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Puf60Q3UEB3 564 aaKnown RBP17.16■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Scaf11E9PZM7 1456 aaKnown RBP17.15■□□□□ 0.34
Ddx55-202ENSMUST00000111438 IghaA0A0A6YXW6 389 aa17.15■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Psme1P97371 249 aa17.15■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Shq1Q7TMX5 569 aa17.15■□□□□ 0.34
Ddx55-202ENSMUST00000111438 P3h3Q8CG70 732 aa17.15■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Rims2Q9EQZ7 1530 aa17.15■□□□□ 0.34
Ddx55-202ENSMUST00000111438 Sin3aQ60520 1274 aaKnown RBP17.14■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Os9Q8K2C7 672 aa17.14■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Ncoa1P70365 1447 aa17.14■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Scn4aQ9ER60 1841 aa17.14■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Itsn2Q9Z0R6 1659 aa17.13■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Arap3Q8R5G7 1538 aa17.13■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Cwc22Q8C5N3 908 aaKnown RBP17.12■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Stard8Q8K031 1019 aa17.12■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Q9D9H8 365 aa17.12■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Wdr66E9Q743 1299 aa17.12■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Rock2P70336 1388 aa17.11■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Atp1b4Q99ME6 356 aa17.11■□□□□ 0.33
Ddx55-202ENSMUST00000111438 PzpQ61838 1495 aa17.1■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Asxl2Q8BZ32 1370 aa17.1■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Arid4bA2CG63 1314 aaKnown RBP17.1■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Med1Q925J9 1575 aa17.1■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Usp40Q8BWR4 1235 aa17.1■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Gm38655A0A286YDK6 273 aa17.09■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Cep170bQ80U49 1574 aa17.09■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Srcin1Q9QWI6 1250 aa17.09■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Cps1Q8C196 1500 aa17.08■□□□□ 0.33
Ddx55-202ENSMUST00000111438 Pik3r4Q8VD65 1358 aa17.08■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Plekhg1F6S200 1446 aa17.08■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Gm13695A2AK44 830 aa17.07■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Bcl11aQ9QYE3 773 aa17.07■□□□□ 0.32
Ddx55-202ENSMUST00000111438 ClspnQ80YR7 1315 aa17.07■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Thsd7aQ69ZU6 1645 aa17.06■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Gtf2e1Q9D0D5 440 aa17.05■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Abca14E9Q8F8 1683 aa17.05■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Nrxn3Q6P9K9 1571 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms