RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Skint5A7XUY5 1461 aa17.82■□□□□ 0.44
Trim50-202ENSMUST00000111180 Kif13aQ9EQW7 1749 aa17.82■□□□□ 0.44
Trim50-202ENSMUST00000111180 Usp47Q8BY87 1376 aa17.82■□□□□ 0.44
Trim50-202ENSMUST00000111180 Tmem131lQ3U3D7 1597 aa17.82■□□□□ 0.44
Trim50-202ENSMUST00000111180 Hdac5Q9Z2V6 1113 aa17.8■□□□□ 0.44
Trim50-202ENSMUST00000111180 Nrxn3Q6P9K9 1571 aa17.79■□□□□ 0.44
Trim50-202ENSMUST00000111180 Atp7aQ64430 1491 aa17.79■□□□□ 0.44
Trim50-202ENSMUST00000111180 Prdm2A2A7B5 1709 aaKnown RBP17.79■□□□□ 0.44
Trim50-202ENSMUST00000111180 Dhx9O70133 1380 aaKnown RBP17.79■□□□□ 0.44
Trim50-202ENSMUST00000111180 Dot1lQ6XZL8 1540 aa17.79■□□□□ 0.44
Trim50-202ENSMUST00000111180 Itsn1Q9Z0R4 1714 aa17.77■□□□□ 0.44
Trim50-202ENSMUST00000111180 Ppip5k1A2ARP1 1436 aa17.77■□□□□ 0.44
Trim50-202ENSMUST00000111180 AnkarA2RT91 1465 aa17.77■□□□□ 0.43
Trim50-202ENSMUST00000111180 GapdhsQ64467 440 aa17.76■□□□□ 0.43
Trim50-202ENSMUST00000111180 Rock1P70335 1354 aa17.75■□□□□ 0.43
Trim50-202ENSMUST00000111180 Eif2ak4Q9QZ05 1648 aa17.74■□□□□ 0.43
Trim50-202ENSMUST00000111180 Naip7Q9JIB3 1402 aa17.74■□□□□ 0.43
Trim50-202ENSMUST00000111180 Ino80Q6ZPV2 1559 aa17.73■□□□□ 0.43
Trim50-202ENSMUST00000111180 Med1Q925J9 1575 aa17.73■□□□□ 0.43
Trim50-202ENSMUST00000111180 Iqgap3F8VQ29 1632 aa17.72■□□□□ 0.43
Trim50-202ENSMUST00000111180 Atp1b4Q99ME6 356 aa17.72■□□□□ 0.43
Trim50-202ENSMUST00000111180 Tarbp1E9Q368 1579 aa17.72■□□□□ 0.43
Trim50-202ENSMUST00000111180 Setd1aE9PYH6 1716 aa17.72■□□□□ 0.43
Trim50-202ENSMUST00000111180 Efcab6Q6P1E8 1516 aa17.71■□□□□ 0.43
Trim50-202ENSMUST00000111180 Tom1O88746 492 aa17.69■□□□□ 0.42
Trim50-202ENSMUST00000111180 Edc4Q3UJB9 1406 aaKnown RBP17.68■□□□□ 0.42
Trim50-202ENSMUST00000111180 Amigo3Q8C2S7 508 aa17.68■□□□□ 0.42
Trim50-202ENSMUST00000111180 IghaA0A0A6YXW6 389 aa17.67■□□□□ 0.42
Trim50-202ENSMUST00000111180 Myo3aQ8K3H5 1613 aa17.67■□□□□ 0.42
Trim50-202ENSMUST00000111180 Prrc2bQ7TPM1 1486 aaKnown RBP17.66■□□□□ 0.42
Trim50-202ENSMUST00000111180 Evi5lH3BKQ3 813 aa17.65■□□□□ 0.42
Trim50-202ENSMUST00000111180 DnmbpQ6TXD4 1580 aa17.65■□□□□ 0.42
Trim50-202ENSMUST00000111180 Thsd7aQ69ZU6 1645 aa17.65■□□□□ 0.42
Trim50-202ENSMUST00000111180 Abca8aQ8K442 1620 aa17.65■□□□□ 0.42
Trim50-202ENSMUST00000111180 Sall3Q62255 1320 aa17.64■□□□□ 0.41
Trim50-202ENSMUST00000111180 Asxl2Q8BZ32 1370 aa17.64■□□□□ 0.41
Trim50-202ENSMUST00000111180 ErbinQ80TH2 1402 aa17.64■□□□□ 0.41
Trim50-202ENSMUST00000111180 Tecpr2Q3UH45 1423 aa17.63■□□□□ 0.41
Trim50-202ENSMUST00000111180 PalldQ9ET54 1408 aa17.63■□□□□ 0.41
Trim50-202ENSMUST00000111180 Mbd5B1AYB6 1498 aa17.63■□□□□ 0.41
Trim50-202ENSMUST00000111180 Fbln2P37889 1221 aa17.63■□□□□ 0.41
Trim50-202ENSMUST00000111180 Gimap5Q8BWF2 308 aa17.63■□□□□ 0.41
Trim50-202ENSMUST00000111180 Brinp3Q499E0 766 aa17.62■□□□□ 0.41
Trim50-202ENSMUST00000111180 Uggt1Q6P5E4 1551 aa17.61■□□□□ 0.41
Trim50-202ENSMUST00000111180 Ehbp1l1Q99MS7 1716 aa17.61■□□□□ 0.41
Trim50-202ENSMUST00000111180 Rgl3Q3UYI5 709 aa17.6■□□□□ 0.41
Trim50-202ENSMUST00000111180 Slain2Q8CI08 581 aa17.6■□□□□ 0.41
Trim50-202ENSMUST00000111180 Cdk13Q69ZA1 1511 aaKnown RBP17.59■□□□□ 0.41
Trim50-202ENSMUST00000111180 Lmtk3Q5XJV6 1424 aa17.59■□□□□ 0.41
Trim50-202ENSMUST00000111180 PplQ9R269 1755 aa17.58■□□□□ 0.41
Trim50-202ENSMUST00000111180 Washc2Q6PGL7 1334 aa17.58■□□□□ 0.4
Trim50-202ENSMUST00000111180 Cypt1Q8CH20 168 aa17.57■□□□□ 0.4
Trim50-202ENSMUST00000111180 Kif7B7ZNG0 1348 aa17.57■□□□□ 0.4
Trim50-202ENSMUST00000111180 Cpsf1Q9EPU4 1441 aaKnown RBP17.56■□□□□ 0.4
Trim50-202ENSMUST00000111180 Q9D9H8 365 aa17.56■□□□□ 0.4
Trim50-202ENSMUST00000111180 Tulp4Q9JIL5 1547 aa17.55■□□□□ 0.4
Trim50-202ENSMUST00000111180 AatkQ80YE4 1365 aa17.55■□□□□ 0.4
Trim50-202ENSMUST00000111180 Shq1Q7TMX5 569 aa17.54■□□□□ 0.4
Trim50-202ENSMUST00000111180 Polr3aB2RXC6 1390 aa17.54■□□□□ 0.4
Trim50-202ENSMUST00000111180 Col18a1P39061 1774 aa17.53■□□□□ 0.4
Trim50-202ENSMUST00000111180 Tns3Q5SSZ5 1440 aa17.53■□□□□ 0.4
Trim50-202ENSMUST00000111180 Nyap1Q6PFX7 833 aa17.53■□□□□ 0.4
Trim50-202ENSMUST00000111180 Slc5a4bQ91ZP4 660 aa17.53■□□□□ 0.4
Trim50-202ENSMUST00000111180 Mug2P28666 1451 aa17.53■□□□□ 0.4
Trim50-202ENSMUST00000111180 Adamts13Q769J6 1426 aa17.52■□□□□ 0.39
Trim50-202ENSMUST00000111180 Pik3c2aQ61194 1686 aa17.52■□□□□ 0.39
Trim50-202ENSMUST00000111180 Wdr66E9Q743 1299 aa17.51■□□□□ 0.39
Trim50-202ENSMUST00000111180 Cep152A2AUM9 1736 aaKnown RBP17.51■□□□□ 0.39
Trim50-202ENSMUST00000111180 Mroh1E0CZ22 1640 aa17.51■□□□□ 0.39
Trim50-202ENSMUST00000111180 Mroh3A0A1D5RM54 893 aa17.5■□□□□ 0.39
Trim50-202ENSMUST00000111180 Ttll13A4Q9F6 804 aa17.5■□□□□ 0.39
Trim50-202ENSMUST00000111180 Atf3Q60765 181 aa17.5■□□□□ 0.39
Trim50-202ENSMUST00000111180 HnrnpmQ9D0E1 729 aaKnown RBP17.5■□□□□ 0.39
Trim50-202ENSMUST00000111180 Plxnc1Q9QZC2 1574 aa17.5■□□□□ 0.39
Trim50-202ENSMUST00000111180 Neurod1Q60867 357 aa17.5■□□□□ 0.39
Trim50-202ENSMUST00000111180 AU022751B1B0V2 589 aa17.49■□□□□ 0.39
Trim50-202ENSMUST00000111180 Tmem94Q7TSH8 1360 aa17.48■□□□□ 0.39
Trim50-202ENSMUST00000111180 Qtrt2B8ZXI1 415 aa17.48■□□□□ 0.39
Trim50-202ENSMUST00000111180 RalgapbQ8BQZ4 1484 aa17.48■□□□□ 0.39
Trim50-202ENSMUST00000111180 Aebp2Q9Z248 504 aaKnown RBP17.47■□□□□ 0.39
Trim50-202ENSMUST00000111180 Arhgef28P97433 1693 aa17.47■□□□□ 0.39
Trim50-202ENSMUST00000111180 Dapk1Q80YE7 1442 aa17.46■□□□□ 0.39
Trim50-202ENSMUST00000111180 Slit3Q9WVB4 1523 aa17.46■□□□□ 0.39
Trim50-202ENSMUST00000111180 ClspnQ80YR7 1315 aa17.46■□□□□ 0.39
Trim50-202ENSMUST00000111180 Rims1Q99NE5 1463 aa17.45■□□□□ 0.38
Trim50-202ENSMUST00000111180 Grwd1Q810D6 446 aaKnown RBP17.43■□□□□ 0.38
Trim50-202ENSMUST00000111180 Arap3Q8R5G7 1538 aa17.42■□□□□ 0.38
Trim50-202ENSMUST00000111180 Ppargc1bQ8VHJ7 1014 aa17.42■□□□□ 0.38
Trim50-202ENSMUST00000111180 Pik3r4Q8VD65 1358 aa17.41■□□□□ 0.38
Trim50-202ENSMUST00000111180 Ifit1bl1D3Z6F0 470 aa17.41■□□□□ 0.38
Trim50-202ENSMUST00000111180 Myom1Q62234 1667 aaKnown RBP17.4■□□□□ 0.38
Trim50-202ENSMUST00000111180 Ggt6Q6PDE7 497 aa17.39■□□□□ 0.37
Trim50-202ENSMUST00000111180 Unc13bQ9Z1N9 1602 aa17.38■□□□□ 0.37
Trim50-202ENSMUST00000111180 Stk26Q99JT2 416 aa17.37■□□□□ 0.37
Trim50-202ENSMUST00000111180 Card11Q8CIS0 1159 aa17.37■□□□□ 0.37
Trim50-202ENSMUST00000111180 Os9Q8K2C7 672 aa17.37■□□□□ 0.37
Trim50-202ENSMUST00000111180 Rundc1Q0VDN7 615 aa17.36■□□□□ 0.37
Trim50-202ENSMUST00000111180 Cdk5rap2Q8K389 1822 aa17.36■□□□□ 0.37
Trim50-202ENSMUST00000111180 Slit2Q9R1B9 1521 aa17.35■□□□□ 0.37
Trim50-202ENSMUST00000111180 Utp14aQ640M1 767 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms